Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00683 ATGATGAATGAGGTTCCTAAGATGCTCTTCTTTTTCCTTTTCTTCCTAGCTTTCGTCCGGAATTCTTGCGCTCACAAGCTCGCTCCTGCTCTGTATGTATTTGGAGACTCGACTCTCGATGCCGGCAACAACAACAACACCAAACTAAAATCAATTCTCCCCTACGGCCTGGATTTTCCTGGAAATCATTCCGGCCGGCTCACGAACGGCTACAATATGGCTGATTTTTTTGGTATGTTTTTTAATCACCAGAATGATACACAGTATATATTGGAAGTATGTGACACGAATGCCACATCCATAATATTTCTTTGTTCTTACAAGTTCTTCCTGATCTTGGTTTTACAGACGGCACGCCCTCCGACCTTGGGGCTGCAAGTTCACCAATTTAGAGAAACTGTTGAAGAATATTTGCCTACGAGGTTGACATGCAATCAAACTGTTTCACAGCACTTGGCCAACTCCATTTTCATGCTCTCTATTGGTGGGAATGATTATTTGCTTAACTATGTTCCAACTTTGGGATCCCCAGACAGCCTTAACGCATCGGAGTTTGCCGATAAAGTCGTCGACCAACTCAGTATTTCTTTGAAGGATTTGTACAACTTGGGAGGCCGGAAATTTGTAATAACCGAAATGGGACCATTAGGGAACTTCCTAGTCCCCATAATTGCTCCACCAACTGGTCTAACTTCTGCACAACTCAACCAACTGGCTCTTATTTACAACGACAGGCTGACAGCAAAGCTCAAGGAATTCACTTCTTCTCTTAAATCTTCAACCTTTGTACAATTGAAAACCTTCAACCTTGCATTGGATTTGATCAAAAATCCCACCAAATACGGTATCATTTTTTGTTTTTTGCACTTATTTTTCTTGAACAATCTGTACATTAGACTTCATTTGATGCCATTTGTTGAAAGGGAGAAGTTTCAGATCTCATCTGAGTGTAGACTTCATGCCGACAATGATTTGTTTAGAGATCAAGAGCAACACAAGATACACATGGATATAAATGAATGGCAGTGTGGATACTGTAAAAAGAGCTTTCGTGGCGAAAAATTTCTTGATCAGCACTTCGACAACCGACACAATAATCTCCTTAATGTCAGCAATGGCAAATGCTTAGCAGATTTATGTGGAGCATTACATTGTGATGTCATGATGAACACAAAGTCAGCCAAATCAAAATGCAACCCTGCTGCAGCTGCCAGGAACCAACATCTATGTGAAAGTCTGGCTAATAGTTGCTTCCCTATTAGTCAAGGTGCTTCTGCAAGTCGACTTCACGAGCTGTTTTTGCGCCAATTTTGCGATGCTCATTCTTGCTCGGGAAAACGCAAACCTTTTTCGAGAGGAGGAAGAGAACAAAAAAGTGTGCTCTACCTCGCAATTTCGATTCTCACTATGATGTTGCTTCCCATTTTCTACGTAGTAGTGTATTTGCACCAGAGGTACTATTTTTTTCGCAACCATAGCAACTCTGTCAACCATACGAGGATTTTTAATCCGTTCGGTGTTTATTCATTTGCCAGGGAGCTGAAGAATGGGAGACAAGAGCTCCGGCGAATCTCGAAAGTTGGGCAGAAAACAAAACCTTCGTAA 1605 41.62 MMNEVPKMLFFFLFFLAFVRNSCAHKLAPALYVFGDSTLDAGNNNNTKLKSILPYGLDFPGNHSGRLTNGYNMADFFGMFFNHQNDTQYILEVCDTNATSIIFLCSYKFFLILVLQTARPPTLGLQVHQFRETVEEYLPTRLTCNQTVSQHLANSIFMLSIGGNDYLLNYVPTLGSPDSLNASEFADKVVDQLSISLKDLYNLGGRKFVITEMGPLGNFLVPIIAPPTGLTSAQLNQLALIYNDRLTAKLKEFTSSLKSSTFVQLKTFNLALDLIKNPTKYGIIFCFLHLFFLNNLYIRLHLMPFVEREKFQISSECRLHADNDLFRDQEQHKIHMDINEWQCGYCKKSFRGEKFLDQHFDNRHNNLLNVSNGKCLADLCGALHCDVMMNTKSAKSKCNPAAAARNQHLCESLANSCFPISQGASASRLHELFLRQFCDAHSCSGKRKPFSRGGREQKSVLYLAISILTMMLLPIFYVVVYLHQRYYFFRNHSNSVNHTRIFNPFGVYSFARELKNGRQELRRISKVGQKTKPS 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12429653 12435502 - Bpe005942.1 Bpe12g00683 112696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00683 534 ProSitePatterns Zinc finger C2H2 type domain signature. 343 364 IPR013087 -
Bpe12g00683 534 PANTHER ZINC FINGER PROTEIN-RELATED 299 486 - -
Bpe12g00683 534 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 299 486 - -
Bpe12g00683 534 Pfam GDSL-like Lipase/Acylhydrolase 31 256 IPR001087 GO:0016788
Bpe12g00683 534 Gene3D SGNH hydrolase 20 295 IPR036514 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00683 Bpe-Chr12:12429653 Bpe02g00274 Bpe-Chr2:1842290 1.05E-31 dispersed
Bpe12g00683 Bpe-Chr12:12429653 Bpe07g00872 Bpe-Chr7:14792941 2.19E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00683 - - jre:108981378 349.362