Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00693 ATGGCGGAATTCACTGCAGATTTCCACGGCTATTCCATGAGTTTCCAGAGCTACTTCTCTCTCTCAGATGACATGTTTTGCGATTATGAAACACCCGAAAATCCTGGAAACTCCGAGGAAATTTTCCCAGAAAGCAATCAGATTTCACGGCCAATTCTTTCGACAGAAAATGAATCTCGCGAAACGAGGAAGAGGAGCTCTGCAATCGCAACTCCTCAAGCTTCTGAAAACGGGATCAAAAGGAAGAAGCGCTCTGGAAGAGGAAAGAGAGTGAAAAGTGATGAGAGAGAAGAAGAGAAATCAGGTGAAATTGTTCTTGTCAGGGCAAGAAGAGGCCAAGCTACAGACAGCCACAGTTTAGCCGAAAGGGTTAGGAGAGGAAAAATCAATGAAAGACTAAGATGCCTCCAAGATATTGTTCCAGGATGCTACAAGTCAATGGGGATGGCAGTGATGCTGGATGAGATTATCAATTATGTCCAGTCTTTGCAGAATCAAGTTGAGTTTCTGTCAATGAGACTCGCTGCAGCCAGCAGTTTCAATTATTCCAATTCTCAATTTGCTTTGCAAAATGCTCCTAGCTCGGGAGAAGACGAGGCAAAAGAGTTGGAGAGATTGACGAGAGAAGGGTGTGGAACGCTAGCTTGCTTCCAATCATCTTGGCCCTTTTAA 672 44.35 MAEFTADFHGYSMSFQSYFSLSDDMFCDYETPENPGNSEEIFPESNQISRPILSTENESRETRKRSSAIATPQASENGIKRKKRSGRGKRVKSDEREEEKSGEIVLVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMAVMLDEIINYVQSLQNQVEFLSMRLAAASSFNYSNSQFALQNAPSSGEDEAKELERLTREGCGTLACFQSSWPF 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12509573 12510781 - Bpe005953.1 Bpe12g00693 112706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00693 223 PANTHER TRANSCRIPTION FACTOR BEE 1 60 222 - -
Bpe12g00693 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 163 IPR011598 GO:0046983
Bpe12g00693 223 Gene3D - 110 183 IPR036638 GO:0046983
Bpe12g00693 223 SMART finulus 119 169 IPR011598 GO:0046983
Bpe12g00693 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 177 IPR036638 GO:0046983
Bpe12g00693 223 MobiDBLite consensus disorder prediction 38 55 - -
Bpe12g00693 223 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 222 IPR024097 GO:0006355
Bpe12g00693 223 MobiDBLite consensus disorder prediction 30 101 - -
Bpe12g00693 223 Pfam Helix-loop-helix DNA-binding domain 117 164 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g01037 Bpe12g00693 CCT
Bpe12g00693 Bpe15g00525 CCT
Bpe12g00693 Bpe15g00525 ECH
Bpe07g01037 Bpe12g00693 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01037 Bpe-Chr7:15889390 Bpe12g00693 Bpe-Chr12:12509573 6.39E-95 dispersed
Bpe12g00693 Bpe-Chr12:12509573 Bpe15g00525 Bpe-Chr15:16408181 4.81E-50 dispersed
Bpe12g00693 Bpe-Chr12:12509573 Bpe06g00416 Bpe-Chr6:15556085 4.80E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22230 PF00010 HLH 6.90E-05 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00693 - - jre:108998289 223.787