Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00694 ATGGCGGCTCCATTTACGGGATTGCAACACAGAGACGGAGGTGGAGTTGCGTTGCTGTCGAATTCGGTGAATAAGGTGGATGCGCCTTCGTCTCCGTCGTCGTCGAATGGTTGTTTGAGGAGCTGCGAGCCTAAGTCTCCTATTCTGATTTTTTTGTTCTTCCACAAAGCGATTCGTTATGAGCTGGATGCGCTTCACAGGTTTGCTATGGCCCTCGCTACTGGCCAGCGAACCGATATTCAGCCTCTTGTCAAGCGATACCATTTTCTCAGATCAATTTATAAACATCACTCCAATGCTGAAGACGAGGTAATTTTTCCAGCACTTGACATTCGTGTGAAGAACGTAGCTCAAACATACTCTCTCGAGCACAAAGGAGAAAGCAATCTTTTTGATCATCTTTTTGAGCTACTCAATTCTAGCACACAAGATGCTGAATGGTTTCCAAGGGAGTTAGCATCTTGTACCGGAGCATTGAGGACATCAGTTAGCCAACATATGGCCAAGGAAGAAGAGCAGGTCTTTCCTTTGCTCATGGAGAAGTTCTCTCTTGATGAGCAAGCATCTCTGCTCTGGCAATTCTTGTGCAGTATTCCTGTGAATATGATGGCTGAATTTCTTCCTTGGTTATCATCATCTATTTCACCAGATGAATGTCAGGATCTACGGAAGTGTTTGAGCAAAATAGTTCCCCAGGAAAAGCTTCTTCAACAGGTCATATTCACATGGATGGAAGGGACAACTGGCGCAAGCTTCGTTGCAAATTGTGTCGATGATTCTTTGGGTCATTGTTGTTCAGATGCTAGCGTTTGCGAATCATCCCAGAAAACAGAGATAGTTAAAAAAGTTTGTGACGTGATGAGTGCTGGAAAAAGGAAACATTTAGAGTTTAGTGCTGATACAACCAATGTCATGGAGGCACATCCAATTAATGACATATTACTTTGGCATAATGCTATTAAAAAGGAGTTAAATGAGATAGCTGAACAGGCTAGAAACATACAACTGTCTGGAAACTTTGATAATCTTTCATCCTTTAATGAGAGACTACATTTCATTGCTGAAGTTTGCATCTTTCATAGCATTGCTGAAGACAAGGTTATCTTTCCCGCAGTAGATGGAGAGTTGTCCTTTCTCCAGGAACATGCTGAAGAAGAAAGTCAATTTAACGAGTTCAGGTGCTTGATTGAAAGTATCCAAAGTGATGGAGAAATATCTAGTTCGTCAGCTGAATTTTTTGTGAAGTTGTGTTCACATGCTGATCAAATTATGGATTCAATTCAGAGACATTTTAATAATGAGGAACTTCAGGTTCTTCCACTTGCTCGAAAGCACTTTAGCCTCAAAAGACAGCGTGAAATCCTATATCATAGCTTGTGCATGATGCCCTTGAAGTTAATTGAGCGAGTCTTGCCGTGGCTGGTTGGGTTGTCGTCTGAAGAGGAAGCTGAAAATTTCCTGAAAAACATCCAATTGGCAGCTCCAACATCAGATACTGCTTTAGTGACACTCTTTTCTGGTTGGGCTTGCAAAGCTCGTAACCGAGGTTTATGCTTGTCTTCAAGAGTGACTGGCAGCTGTCCAGTAAAGAGGTTCATTGAAATTGAAGAAAATTTTGTCCCATCATTCTGTTCTTGTGCCTCTGTGGTGTCTTCAAGAGAGACTGCAGCATCAACTATCAGTGAAAGACCAGCAAAGCGAAATGTCTCAGTTTCGTACAAAAGTTGTGTTTCCTCTAGCTGCTCAGAGGCGGCTAATTTGCAGCAGTCTTGCTGTAATGATGAGTCTTGTTGTGTCCCAGGCTTAGGAGTCGATAGCAATAATCTGGGGTTGAGTTCTCTTTTTACAACAAAGTCTTTGTGTTCCTTAGCTCCCCCCATCTCTGGTGCCCCTTCTCTCAATTCGAGCCTTTTCTCGTGGGAAACAGATATTAGCTTTTCTGATATCGGGCCTTCAGGACGACCAATTGATACTATTTTTAAATTTCATAAAGCTATAAGAAAAGACTTGGAGTATTTAGATGTGGAATCTGGAAAGCTTAATCAATGCGATGAGACATCCCTAAGGCAATTTATTGGTAGATTTCGCCTGCTATGGGGATTGTATCGAGCTCACAGTAATGCTGAAGATGATATAGTGTTTCCTGCTCTAGAGTCTAAAGAGGCATTGCATAATGTCAGTCACTCTTACACGCTGGACCATAAACAGGAGGAAAGGTTATTTGGAGACATTTCAAGTGTTCTTTTGGACCTTTCTCATCTCCATGTAAACACCTCGTTGGACCTTGATTCGCCCACAAATAGCTATAACTCTATGGGAAAAAAGTATGTTGAGCTAGCTACGAAGCTTCAAGGAATGTGCAAATCTATTAGAGTGACTTTAGATCAGCATATCTTCAGGGAAGAACTCGAACTATGGCCATTATTTGGAAAACATTTCTCTGTGGAGGAGCAAGATAAAATAGTTGGACGCATCATTGGAACAACAGGTGCAGAAGTTCTCCAATCAATGTTGCCATGGGTAACTTCAGCATTGACGCAGGATGAACAGAATATAATGATGGATACATGGAAGCAAGCCACAAAGAACACAATGTTCAATGAGTGGCTCAATGAATGTTGGAAAGGATCTGAGGCATCGACTATACGTACGGGAACATTGGAATCTGATACCACTCAAAAAGGTGTTGAGATTCGAGAAGGCGTCAATCAGTGTGATCAGTTGTTTAAGCCTGGTTGGAAGGATATTTTCCGAATGAATCAAAATGAGATTGAATCAGAGATAAGAAAGGTCTACCAGGATTTGACTCTTGATCCAAGAAGAAAGGCATATCTGGTGCAGAATCTTATTACCAGTCGCTGGATTGCCGCCCAACAGAAATTACCGGAAGTCACAGCGGGATGTTCACCATCATATAGTGACCCAGAAAAAAGTAAATTCGGGTGTGAACATTACAAAAGAAACTGCAAACTCCTTGCTGCTTGCTGTGGCAAGTTGTTTACATGTCGGTTTTGTCATGATAATGTTAGCGACCACTCTATGGATAGGAAAGCAACCTCTGAGATGATGTGCATGCGCTGTATGACAATTCAGGCAGTTGGGCCTACATGTTCAACTCCTTCATGCAATGGATTCTCAATGGCAAAGTACTATTGCAGTATTTGCAAATTTTTTGACGATGAAAGAACTGTATATCATTGCCCATTTTGCAACTTGTGTCGTCTGGGGAAAGGTCTTGGACTTGACTTTTTTCACTGTATGACGTGCAATTGTTGTCTGGGGATAAAGGTGGTGAATCACAAGTGCCTTGAAAAAAGTTTGGAAACAAACTGTCCCATCTGCTGTGATTTCCTGTTCACATCCAGTGCAACAGTCAGAGCACTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCATATACTTGTAGCCATTACACGTGTCCTATTTGTAGCAAATCGTTAGGAGACATGGCGGTTTATTTTGGCATGCTTGATGCACTGTTGGCTGCTGAAGAGCTTCCAGAGGAGTACAGGGGTCGTTGTCAGCAGGATATATTATGCAATGACTGTGATAGGAAGGGGACGTCAAGATTTCATTGGCTATATCACAAGTGTGGATCTTGTGGTTCATACAACACCAGAGTCATCAAGAGCGAGACTGCAAATGCAGATTGCTCGGAATCAAACCGATGA 3699 42.15 MAAPFTGLQHRDGGGVALLSNSVNKVDAPSSPSSSNGCLRSCEPKSPILIFLFFHKAIRYELDALHRFAMALATGQRTDIQPLVKRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTQDAEWFPRELASCTGALRTSVSQHMAKEEEQVFPLLMEKFSLDEQASLLWQFLCSIPVNMMAEFLPWLSSSISPDECQDLRKCLSKIVPQEKLLQQVIFTWMEGTTGASFVANCVDDSLGHCCSDASVCESSQKTEIVKKVCDVMSAGKRKHLEFSADTTNVMEAHPINDILLWHNAIKKELNEIAEQARNIQLSGNFDNLSSFNERLHFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNEFRCLIESIQSDGEISSSSAEFFVKLCSHADQIMDSIQRHFNNEELQVLPLARKHFSLKRQREILYHSLCMMPLKLIERVLPWLVGLSSEEEAENFLKNIQLAAPTSDTALVTLFSGWACKARNRGLCLSSRVTGSCPVKRFIEIEENFVPSFCSCASVVSSRETAASTISERPAKRNVSVSYKSCVSSSCSEAANLQQSCCNDESCCVPGLGVDSNNLGLSSLFTTKSLCSLAPPISGAPSLNSSLFSWETDISFSDIGPSGRPIDTIFKFHKAIRKDLEYLDVESGKLNQCDETSLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEERLFGDISSVLLDLSHLHVNTSLDLDSPTNSYNSMGKKYVELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNIMMDTWKQATKNTMFNEWLNECWKGSEASTIRTGTLESDTTQKGVEIREGVNQCDQLFKPGWKDIFRMNQNEIESEIRKVYQDLTLDPRRKAYLVQNLITSRWIAAQQKLPEVTAGCSPSYSDPEKSKFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCMTIQAVGPTCSTPSCNGFSMAKYYCSICKFFDDERTVYHCPFCNLCRLGKGLGLDFFHCMTCNCCLGIKVVNHKCLEKSLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRGRCQQDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRVIKSETANADCSESNR 1232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12513117 12521553 - Bpe005954.1 Bpe12g00694 112707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00694 1232 CDD Hr-like 657 807 - -
Bpe12g00694 1232 PANTHER CHY ZINC FINGER PROTEIN 31 1227 - -
Bpe12g00694 1232 Gene3D nmb1532 protein domain like 314 458 - -
Bpe12g00694 1232 Gene3D nmb1532 protein domain like 46 195 - -
Bpe12g00694 1232 ProSiteProfiles Zinc finger CTCHY-type profile. 1047 1110 IPR017921 -
Bpe12g00694 1232 SUPERFAMILY Zinc hairpin stack 1048 1104 IPR037275 -
Bpe12g00694 1232 ProSiteProfiles Zinc finger RING-type profile. 1111 1153 IPR001841 -
Bpe12g00694 1232 SUPERFAMILY RING/U-box 1110 1156 - -
Bpe12g00694 1232 Pfam Hemerythrin HHE cation binding domain 655 808 IPR012312 -
Bpe12g00694 1232 Pfam Hemerythrin HHE cation binding domain 52 178 IPR012312 -
Bpe12g00694 1232 Pfam Hemerythrin HHE cation binding domain 308 442 IPR012312 -
Bpe12g00694 1232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1104 1155 IPR013083 -
Bpe12g00694 1232 CDD Hr-like 50 176 - -
Bpe12g00694 1232 CDD Hr-like 312 440 - -
Bpe12g00694 1232 CDD RING-H2_Pirh2 1110 1153 - -
Bpe12g00694 1232 ProSiteProfiles Zinc finger CHY-type profile. 975 1044 IPR008913 GO:0008270
Bpe12g00694 1232 SUPERFAMILY CHY zinc finger-like 974 1038 IPR037274 GO:0008270
Bpe12g00694 1232 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 31 1227 - -
Bpe12g00694 1232 Pfam Ring finger domain 1110 1152 IPR001841 -
Bpe12g00694 1232 Gene3D nmb1532 protein domain like 650 872 - -
Bpe12g00694 1232 SMART ring_2 1111 1152 IPR001841 -
Bpe12g00694 1232 Pfam CHY zinc finger 982 1057 IPR008913 GO:0008270
Bpe12g00694 1232 Pfam Zinc-ribbon 1158 1216 IPR039512 -
Bpe12g00694 1232 Gene3D - 1183 1226 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g01039 Bpe12g00694 CCT
Bpe12g00694 Bpe15g00528 CCT
Bpe07g01039 Bpe12g00694 ECH
Bpe12g00694 Bpe15g00528 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01039 Bpe-Chr7:15895945 Bpe12g00694 Bpe-Chr12:12513117 0 dispersed
Bpe12g00694 Bpe-Chr12:12513117 Bpe15g00528 Bpe-Chr15:16437261 0 dispersed
Bpe12g00694 Bpe-Chr12:12513117 Bpe05g00846 Bpe-Chr5:21662122 6.22E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00694 K16276 - mnt:21402857 1916.74