Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00697 CAAATGACGGACTTAACGAGAACTCTTCACACCTTGAGCCGACCTGCTCCCATGGAGGATCTTCTTGGACTTCTTCGAATTCGAATCAAGCGCGGCGTTAACCTCGCCATTCGCGATCTTCGTAGCAGCGATCCTTACGTCGTCGTTAGGCTTGCCAAACAGAAATTGAAGACACGCGTGATCAAGAAGAATGTTAATCCTGAGTGGAATGAAGATTTGACATTTCCTGTCACGGATCCTAATATTCCTCTTAAGCTGAGTGTATATGATCACGACACGTTTACCAGGGATGATAAAATGGGAGACGCAGAAGTGGACATAAAACAATTTGTAGAAGCTCTCAAGATGAAATTTGAAGGCCTTCCCAATGGCACTGTCATCTCAAGAATACAACCTACCAGGCAAAATGACGTGGCCGAGGAAAGCAGCATTGTGTGGATGAATGGGATGGTCGAACTAGATCTGTTCCTCCGGCTGAGGAATGTCGAATGCGGCGAGCTAGAAATACAATTAAAATGGATCGATCTTCCAGGTTCTAAGGGGTAA 546 45.6 QMTDLTRTLHTLSRPAPMEDLLGLLRIRIKRGVNLAIRDLRSSDPYVVVRLAKQKLKTRVIKKNVNPEWNEDLTFPVTDPNIPLKLSVYDHDTFTRDDKMGDAEVDIKQFVEALKMKFEGLPNGTVISRIQPTRQNDVAEESSIVWMNGMVELDLFLRLRNVECGELEIQLKWIDLPGSKG 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12541503 12542881 + Bpe005957.1 Bpe12g00697 112710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00697 181 ProSiteProfiles C2 domain profile. 6 120 IPR000008 -
Bpe12g00697 181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 23 143 IPR035892 -
Bpe12g00697 181 Gene3D C2 domain 20 180 IPR035892 -
Bpe12g00697 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 11 180 - -
Bpe12g00697 181 CDD C2_ArfGAP 22 165 - -
Bpe12g00697 181 PRINTS C2 domain signature 39 51 IPR000008 -
Bpe12g00697 181 PRINTS C2 domain signature 84 92 IPR000008 -
Bpe12g00697 181 PRINTS C2 domain signature 63 76 IPR000008 -
Bpe12g00697 181 Pfam C2 domain 23 110 IPR000008 -
Bpe12g00697 181 SMART C2_3c 24 119 IPR000008 -
Bpe12g00697 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 11 180 IPR044562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01048 Bpe-Chr7:15972984 Bpe12g00697 Bpe-Chr12:12541503 4.43E-96 dispersed
Bpe12g00697 Bpe-Chr12:12541503 Bpe14g00079 Bpe-Chr14:1274072 2.22E-78 dispersed
Bpe12g00697 Bpe-Chr12:12541503 Bpe15g00515 Bpe-Chr15:16350028 4.69E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00697 - - jre:109020059 261.922