Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00703 CTGAGCTACATGTCTTCCATTCCCAGCGACGACGAAGATGAGAACTTATCAGGCGAAGAAGCCGAAGGCGGTTTTGATGAGGACATTGAAGCTCTAAGGCGAGCGTGCTTGCTCACCGGGACGGATCCTGATGATTGTAGTTATCAGTCTTTGTCTGTCGGCGTCGGCGACGCTTGCTCCGGCGGACTTGTTCCTGTCTGTGAAAGTGATGGCGATGATGATCTCGAACTTGTGCGTAGCATTCGGGACCGGTTCTCGATGTCTAACGAGGAGTATCAACATCTGTCTGTGAAACCTAGAAATACTATTCCTCCTGTGACGTCCGACGATGAGGAGGACGATTTTGAAACGCTCCGGGCCATTCAACGACGCTTTGCGGCCTATGATAAAGGTAGGCTTCTGTGCTTTAAGGAATGTTACAATAAATTATCTAGCATTTCTGGGATAGAGTGCCCAAACTCAGAGGAACTTTGTAATACTGTCCATAACCCAAGTAATGTGGATCAGAATCCTTCCTACGCAATATGGAAACTACCTAATGCTTACATATCATTGACATCACCACTGCAAGGTTCTGGGTTACCAAAGTCTGCAATAGCATTTATTGATGCCATTAAAAAAAATAGATCTTGTCAGAAGCTCCTTCGAAGTAAGTTGATTCACATTGAGGCAAAACTTGAGGAGAACAAAGGGCTGAAAGACCGGTTCAAAATCTTGAAAGACTTTCAGGTTTCATGTAAAAGAAGAATAGGGCGTGCGTTGTCCCAGAAGAAGGATCCACGTGTTCAGCTAATATCCGTGGAGAAACTGTGCACTTCAAAGGATTTGTCGAAGGTTAAGGACAAAAAGGTATCCACCATGCTTTGTGGTCCGGTGGAGAATTCTCATGTTGCAAAGTATAGAATGGCTTTAACCATGTTTCCACTTTCACTTGAACGGAAAAAATGGTCAAAAACTGAAAAAGAAAATCTTGGGAAGGGAATAAAACAACAATTTCAAGAAATGGCGCTTCAAATTTCATCATTGGTGCTTGTTTTTCTTGACAGTGGTACTGTGGAATCGCCTGGAGAGTCAAATGATATTGATAATATTCTTGAGTCAATTAAAGATTTTGATTTCACTCCTGAAAAGATTAGGGAGTTTCTGCCAAAGGTCAATTGGGAAAGATTGGCTTCCATGTATGTTGGGGGTCGGTCTGGTGCAGAATGTCAAGCAAGGTGGCTGAATTATGAAGATCCATTGATCAATCATAACCCATGGACTGCAATAGAGGATAAGAATCTCTTGTTCATCATCCAAGAAAAAGGGATAAATAACTGGTTTGATATAGCAGTGTCGCTGGGGACTAATAGAACTCCTTGTCAGTGCCTATCACGCTATCAGAGGAGTTTAAATGCTTCGATACTCAAAAGAGAGTGGACCAAGGAGGATGATGATAAACTTCGTTCTGCTGTAGAAACAATTGGTGTGGGAGATTGGCAAGCTGTAGCTTCTGCCTTAGAAGGACGGGCAGGTACCCAATGCTCAAATAGATGGAAAAAATCACTTGATCCTGCAAGAACTAGAAGAGGGCCATTCACACCTGTTGAAGACAAGCGCCTGAAGATTGCAGTAATGCTTTTTGGGCCAAAAAATTGGAATAAGAAAGCTCAATTCTTGCCAGGTCGAAACCAAGTTCAATGTAGAGAAAGATGGTACAATTGTTTAGATCCTTCTCTAAAAAGAGGCAACTGGACTGACGAAGAGGATCGGATGCTTTCAGCAGCGATTAGAGAACACGGCTATAGTTGGGCCAAGGTGGCGACATGTGTGCCTTCACGTACTGATAATGAGTGTCGGAGGAGGTGGACAAAATTATTTCCAAATGAAGTTCCATTGCTCCAAGAAGCAAGAAGAATTCAAAAGGCCGCTTTTATTGGTAACTTTGTTGATCGAGAGTCAGAAAGATCTACCCTTCTTCTTATTGACTTTCAACCAACACCCATTACAAATCCAATCATTGCACCAGAGAATGTCAATCCTTCGCAGAAAAGGAAGAGAAAGCTGAGGTCTGATTCATAG 2061 42.79 LSYMSSIPSDDEDENLSGEEAEGGFDEDIEALRRACLLTGTDPDDCSYQSLSVGVGDACSGGLVPVCESDGDDDLELVRSIRDRFSMSNEEYQHLSVKPRNTIPPVTSDDEEDDFETLRAIQRRFAAYDKGRLLCFKECYNKLSSISGIECPNSEELCNTVHNPSNVDQNPSYAIWKLPNAYISLTSPLQGSGLPKSAIAFIDAIKKNRSCQKLLRSKLIHIEAKLEENKGLKDRFKILKDFQVSCKRRIGRALSQKKDPRVQLISVEKLCTSKDLSKVKDKKVSTMLCGPVENSHVAKYRMALTMFPLSLERKKWSKTEKENLGKGIKQQFQEMALQISSLVLVFLDSGTVESPGESNDIDNILESIKDFDFTPEKIREFLPKVNWERLASMYVGGRSGAECQARWLNYEDPLINHNPWTAIEDKNLLFIIQEKGINNWFDIAVSLGTNRTPCQCLSRYQRSLNASILKREWTKEDDDKLRSAVETIGVGDWQAVASALEGRAGTQCSNRWKKSLDPARTRRGPFTPVEDKRLKIAVMLFGPKNWNKKAQFLPGRNQVQCRERWYNCLDPSLKRGNWTDEEDRMLSAAIREHGYSWAKVATCVPSRTDNECRRRWTKLFPNEVPLLQEARRIQKAAFIGNFVDRESERSTLLLIDFQPTPITNPIIAPENVNPSQKRKRKLRSDS 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12573083 12584118 + Bpe005963.1 Bpe12g00703 112716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00703 686 ProSiteProfiles Myb-like domain profile. 570 620 IPR001005 -
Bpe12g00703 686 Gene3D - 312 413 - -
Bpe12g00703 686 ProSiteProfiles Myb-like domain profile. 412 464 IPR001005 -
Bpe12g00703 686 CDD SANT 472 516 IPR001005 -
Bpe12g00703 686 Gene3D - 574 623 - -
Bpe12g00703 686 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 21 682 - -
Bpe12g00703 686 SUPERFAMILY Homeodomain-like 449 518 IPR009057 -
Bpe12g00703 686 SMART sant 469 518 IPR001005 -
Bpe12g00703 686 SMART sant 522 571 IPR001005 -
Bpe12g00703 686 SMART sant 574 622 IPR001005 -
Bpe12g00703 686 SMART sant 416 466 IPR001005 -
Bpe12g00703 686 SMART sant 312 413 IPR001005 -
Bpe12g00703 686 SUPERFAMILY Homeodomain-like 520 616 IPR009057 -
Bpe12g00703 686 Pfam Myb-like DNA-binding domain 473 534 - -
Bpe12g00703 686 ProSiteProfiles Myb-like domain profile. 465 516 IPR001005 -
Bpe12g00703 686 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 465 520 IPR017930 -
Bpe12g00703 686 Gene3D - 521 573 - -
Bpe12g00703 686 CDD SANT 373 410 IPR001005 -
Bpe12g00703 686 ProSiteProfiles Myb-like domain profile. 518 569 IPR001005 -
Bpe12g00703 686 SUPERFAMILY Homeodomain-like 393 461 IPR009057 -
Bpe12g00703 686 Pfam Myb-like DNA-binding domain 575 619 IPR001005 -
Bpe12g00703 686 Pfam Myb-like DNA-binding domain 418 462 IPR001005 -
Bpe12g00703 686 CDD SANT 577 620 IPR001005 -
Bpe12g00703 686 Gene3D - 415 464 - -
Bpe12g00703 686 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 570 624 IPR017930 -
Bpe12g00703 686 MobiDBLite consensus disorder prediction 1 24 - -
Bpe12g00703 686 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 522 569 IPR017930 -
Bpe12g00703 686 MobiDBLite consensus disorder prediction 665 686 - -
Bpe12g00703 686 CDD SANT 419 464 IPR001005 -
Bpe12g00703 686 CDD SANT 525 567 IPR001005 -
Bpe12g00703 686 Gene3D - 469 519 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00703 Bpe15g00520 CCT
Bpe12g00703 Bpe13g00370 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00703 Bpe-Chr12:12573083 Bpe04g01326 Bpe-Chr4:19845724 1.65E-12 dispersed
Bpe12g00703 Bpe-Chr12:12573083 Bpe02g00177 Bpe-Chr2:1225647 4.52E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22232 PF13921 Myb_DNA-bind_6 4.00E-12 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00703 K09422 - qsu:112030773 784.637