Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00718 ATGAGCCTTCACATTCTCAGGGCCACGCCGGTTGCGTCTCCGTCTTCTTCCTCCCGAGCCATAGTCTCCCTCCCTTATCTCAAATCCATTTCGAATTCACTCCTCTCTCTCCCTTCTCCCTCTAACTTCCTACCCTTTTCTGCTTTCGACGTTCCTTTCAGCTCTTCTTCGCCCAAATCCTCTGTTCCTCTCTCTGGTTTTCGCCGGAGCTTCCGTGGCGGGCTTACTGTTTCCATGGCTGCACCTGGGTCTGTCCCGAAATCCGAGGAGGAGTGGCGGGCTATTCTTTCTCCCGAACAGTTTCGGATTCTCAGACGGAAAGGAACGGAGTATCCAGGGACAGGAGAATATGACAGCTTCTATGGGGAGGGAGTTTATCTCTGCGCAGGATGTGGAACTCCTCTTTATCAATCGACCACAAAATTCAAGTCCGGTTGTGGTTGGCCAGCTTTCTTTGAAGGTCTTCCTGGAGCCATTAATCGTATTATACTTGGTTTCTTCTTTGCTGGAATTGTGCTGAACCAATTTGGCGCGATCAGAAATCTTACTGATGTTAAAGTCCTTTCTGAGTGGGGAATCCTTTTTCTGCTGTTTGAAATGGGTTTAGAACTCTCTTTTGCCCGTTTGAAGGCTCTAGCAATATTTGCCTTCGGCATGGGATTGCCTCAGGTGGTGCTATCCACTCTTGCTTTCACTGCCTTTGAACTCCCTCCAAATGGAGCCGTTGGAACAAGAATCCTTGAGTTTCTTTTTCACTCAAGGCCTGATTTGGTTAACATAAGAAGTGTTGATGAAGCTATAGTGATTGGTGCTGCACTCTCGTTGTCTTCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAAAAAGGTGAGCTTCCGACCAGATTTGGATCAGCAACATTGGGGATACTTCTTCTACAGGACATTGCAGTTGTCCCCCTCTTAGTCATTCTCCCAGTGCTAGAGAGCCAGAATTTGGTCCAGGAAAGTATCTGGCCAATGCTTGCCCAAGAAAGCTTAAAGGCTTTGGGTGGACTGGGTCTGCTTTCTCTTGGAGGAAAATTTCTTCTTAGGCGAGTCTTTGAGGTAGTTGCTGAAGCCAGGAGCTCTGAAGCCTTTGTTGCTCTCTGCTTGCTGACAGTTGCTGGGACTTCACTTATTACCCAGAAGTTGGGCTTCAGTGATACACTTGGAGCATTTTTAGCTGGAGCGATCTTAGCAGAAACAAACTTTCGAACACAAATTGAAGCAGATATTAGGCCATTCCGAGGATTACTGCTGGGTTTATTTTTTGTGACTACTGGAACTTCCATTGACATGCAGGTTCTTTTCCGAGAGTGGCCAAATGTACTTTCACTTTTGGCAGGACTAATAGTAATAAAGACAATGATAATAACAGCAATAGGTCCCCGTGTTGGATTGACTTTACAAGAAAGTGTAAGAATTGGATTACTTCTTTCTCAGGGAGGCGAGCTTGGAGTGTTACCTCTCGAGCTTAACAAGCTTCTTATCATCGTTGTTGTGCTATCCATGGCGTTAACTCCATTACTTAATGAAGCTGGAAGAAAGGCTGCTGAATTGATAGACGGCAAGGTTGAACCAGAAAGTAAAACTAAGGAGACTGTAAATTTTGACGCAACGGAACCTGTTGTGATTCTTGGGTTTGGGCAAATGGGTCAGGTCCTAGCGAATTTCTTGTCTGCACCATTGGCTTATGGAGAAGATGGTAATGCTGTAGGATGGCCCTATGTTGCTTTTGATCTTGATCCTTCTGTTGTGAAGGCATCTAGAAAACTTGGTTTTCCTATTCTCTTTGGGGATGGATCACGTCCTATAGTTTTGCAATCTGCTGGAATTTCTTCTCCCAAAGCTGTGATGATTATGTACACAGGGCGTAAGAGAACGATCGAGGCTGTTCAGAGACTTCGAATTGCTTTCCCTGCAATTCCAATTTATGCCAGAGCTAAAGACCTCATGCATCTGTTAGATCTGAAGAAAGCAGGTGCAACAGATGCTATTCTTGAAGATGCAGAGACAAGTTTACAATTGGGTTCTAGGCTTTTGAAAGGGCTAGGTGTCATGTCAGATGATGTGAGTTTCCTAAGTCAGCTCGTTCGAGACTCCATGGAGTCACAAGCTCAAGAAGAAGTCAGCAAAAGCAATGAGCGGGAGTTAGATATTATGCGGCCATTACAGGTAAGGGTTGCTGACTTAAACGAAGGTCGGCCACCCTGTTCTCCAGCTTCACGAAAAGACGAACTTTTGAGGGTGAACAAGGAAGATGTGTCCCATATCCTTAGGCTTCAAGAGGATGCAAATCAAGGGAAAGTTGAGGCTGGAATTGGAGCCATGGAAGACGGACATGGGAAAGGAGTTCTGTACTGTGAACTTGGAATAGACAACAAGTTTGATGATAAATCTGAAGATGAAGTGAAGAACTTGGTGGACTCATCAACCCCTTGCCTCACAGTTGGGGATGAAACTTGA 2484 45.37 MSLHILRATPVASPSSSSRAIVSLPYLKSISNSLLSLPSPSNFLPFSAFDVPFSSSSPKSSVPLSGFRRSFRGGLTVSMAAPGSVPKSEEEWRAILSPEQFRILRRKGTEYPGTGEYDSFYGEGVYLCAGCGTPLYQSTTKFKSGCGWPAFFEGLPGAINRIILGFFFAGIVLNQFGAIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAIFAFGMGLPQVVLSTLAFTAFELPPNGAVGTRILEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVQESIWPMLAQESLKALGGLGLLSLGGKFLLRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQVLFREWPNVLSLLAGLIVIKTMIITAIGPRVGLTLQESVRIGLLLSQGGELGVLPLELNKLLIIVVVLSMALTPLLNEAGRKAAELIDGKVEPESKTKETVNFDATEPVVILGFGQMGQVLANFLSAPLAYGEDGNAVGWPYVAFDLDPSVVKASRKLGFPILFGDGSRPIVLQSAGISSPKAVMIMYTGRKRTIEAVQRLRIAFPAIPIYARAKDLMHLLDLKKAGATDAILEDAETSLQLGSRLLKGLGVMSDDVSFLSQLVRDSMESQAQEEVSKSNERELDIMRPLQVRVADLNEGRPPCSPASRKDELLRVNKEDVSHILRLQEDANQGKVEAGIGAMEDGHGKGVLYCELGIDNKFDDKSEDEVKNLVDSSTPCLTVGDET 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12706920 12723034 - Bpe005979.1 Bpe12g00718 112731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00718 827 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 548 691 IPR036291 -
Bpe12g00718 827 Gene3D Peptide methionine sulfoxide reductase. 76 159 - -
Bpe12g00718 827 ProSiteProfiles Methionine-R-sulfoxide reductase (MsrB) domain profile. 89 158 IPR002579 GO:0033743
Bpe12g00718 827 SUPERFAMILY Mss4-like 86 161 IPR011057 -
Bpe12g00718 827 Pfam Sodium/hydrogen exchanger family 163 493 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe12g00718 827 ProSiteProfiles RCK N-terminal domain profile. 548 680 IPR003148 GO:0006813
Bpe12g00718 827 Gene3D - 160 525 IPR038770 -
Bpe12g00718 827 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 163 759 - -
Bpe12g00718 827 Gene3D - 548 719 - -
Bpe12g00718 827 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 163 759 - -
Bpe12g00718 827 Pfam TrkA-N domain 549 672 IPR003148 GO:0006813
Bpe12g00718 827 Pfam SelR domain 91 159 IPR002579 GO:0033743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00718 Bpe-Chr12:12706920 Bpe13g00937 Bpe-Chr13:15260789 6.43E-77 dispersed
Bpe12g00718 Bpe-Chr12:12706920 Bpe02g01537 Bpe-Chr2:18478444 6.99E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00718 - - jre:109008703 974.926