Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00721 CTTGATCTTGTTTGCGTTGCAGTGAGGAAGTTGACAGTGTTGAGGAATCAGCGCTTCGCTTTTGGGAAATTTCATTTCTCTACCGCCGCAGAGCCATCATCCAGCCCCGGTAATCCTCCGAGGGTTCCGAATCTTATTGGTGGGAGATTTGTTGATTCCGAATCATCAGCATTCATCGATGTCGTTAACCCAGCAACGCAAGAAATTGTTTCTCAAGTTCCATTGACTACAACTGAAGAATTTAAAGCTGCAGTATCTGCAGCAAAGAAAGCTTTTCCATCATGGCGTAATACCCCAATTACAACCCGTCAACGAATAATGCTCAAACTCCAAGAGCTTATTCGAAAAAACATGGACAAGCTTGCCCAGAATATTACAACTGAACAGGGAAAAACATTGAAGGATGCACATGGAGATGTGTTTCGTGGGCTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACCCTACAAATGGGGGAGTATGTCTCCAACGTGTCTCATGGAATTGACACCTACAGCATTCGAGAGCCTTTAGGCGTGTGTGCTGGGATTTGTCCATTCAACTTTCCGGCAATGATTCCCTTATGGATGTTTCCAGTCGCAGTAACATGTGGGAATACCTTTGTTTTAAAGCCCTCTGAAAAGGATCCAGGGGCGTCTATAATTCTGGCCGAGTTGGCAAAAGAGGCTGGGTTACCTGATGGTGTCTTAAACATTGTGCACGGCACCAATGAGATTGTTAATGCCATTTGTGATGATGACAACATAAGAGCTGTTTCATTTGTGGGCTCTAATACTGCGGGAATGCACATTTATTCGAGAGCATCAGCTAAAGGAAAACGATCTAATATGGGGGCCAAGAATCACGCTATTGTAATGCCTGACGCAAGTATAGATGCTACTCTGAACTCTTTAGTCGCTGCTGGTTTTGGTGCTGCAGGACAAAGATGCATGGCACTTAGCACGGCTTTATTTGTTGGTGGCTCAGAGGCATGGGAGAAAAAACTTGTGGAACGAGCCAGTGCTTTGAAGGTAAACTCTGGAATGGAATCTGATGCCGATCTTGGTCCAGTAATTAGCAAACAGGCAAAAGAAAGAATCTGCAGATTAATTGAATCTGGTGTCCAAAGTGGAGCAAGGATGCTGCTTGACGGGAGAAGTATTGTGGTTCCTGGATATGAACATGGCAATTTCATAGGCCCTACTATCTTATCAGAGGTTGCAGAAAACATGGAGTGCTACAAAGAGGAGATTTTTGGCCCAGTTCTTCTTTGCATGCAGGCAGAAAGCCTAGACGAAGCCATAAGCATCGTCAACAGAAACAAGTATTTACTGCCTTTGTTCTTTTTTTTTTTTTTAAAAGTACCGTTAATTCTGTGTGATTATGGTGCAAAAGAAATATGTGATAGATATGGAAACGGAGCTGCAATATTCACTTCATCTGGTGTAGCTGCAAGGAAGTTCCAGACTGAGATTGAGGCTGGACAGGTCGGGATCAATGTTCCGATTCCAGTGCCATTGCCGTTTTTCTCGTTCACCGGCTCCAAATCATCTTTTGCTGGGGACCTCAACTTCTATGGCAAAGCTGGTGTTAATTTTTACACACAGATCAAAACAGTGACCCAACAATGGAAAGACCTGCCTGATGGAAGTGGAGTCAGCCTTGCAATGCCAACTTCTAGTTCTCAAAAATAG 1695 44.07 LDLVCVAVRKLTVLRNQRFAFGKFHFSTAAEPSSSPGNPPRVPNLIGGRFVDSESSAFIDVVNPATQEIVSQVPLTTTEEFKAAVSAAKKAFPSWRNTPITTRQRIMLKLQELIRKNMDKLAQNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAKEAGLPDGVLNIVHGTNEIVNAICDDDNIRAVSFVGSNTAGMHIYSRASAKGKRSNMGAKNHAIVMPDASIDATLNSLVAAGFGAAGQRCMALSTALFVGGSEAWEKKLVERASALKVNSGMESDADLGPVISKQAKERICRLIESGVQSGARMLLDGRSIVVPGYEHGNFIGPTILSEVAENMECYKEEIFGPVLLCMQAESLDEAISIVNRNKYLLPLFFFFFLKVPLILCDYGAKEICDRYGNGAAIFTSSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKSSFAGDLNFYGKAGVNFYTQIKTVTQQWKDLPDGSGVSLAMPTSSSQK 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12741865 12752069 + Bpe005982.1 Bpe12g00721 112734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00721 564 CDD ALDH_F6_MMSDH 42 544 IPR010061 GO:0004491
Bpe12g00721 564 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 310 321 IPR016160 GO:0016491
Bpe12g00721 564 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 31 443 - -
Bpe12g00721 564 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 469 562 - -
Bpe12g00721 564 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 31 443 IPR010061 GO:0004491
Bpe12g00721 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 507 539 IPR016162 GO:0016491
Bpe12g00721 564 Pfam Aldehyde dehydrogenase family 50 443 IPR015590 GO:0016491
Bpe12g00721 564 Pfam Aldehyde dehydrogenase family 470 540 IPR015590 GO:0016491
Bpe12g00721 564 SUPERFAMILY ALDH-like 40 546 IPR016161 GO:0016491
Bpe12g00721 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 470 506 IPR016163 GO:0016620
Bpe12g00721 564 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 469 562 IPR010061 GO:0004491
Bpe12g00721 564 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 44 443 IPR010061 GO:0004491
Bpe12g00721 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 284 IPR016162 GO:0016491
Bpe12g00721 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 445 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00721 Bpe-Chr12:12741865 Bpe07g00475 Bpe-Chr7:8120640 7.26E-58 dispersed
Bpe12g00721 Bpe-Chr12:12741865 Bpe01g00522 Bpe-Chr1:3381284 3.47E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00721 K00140 - cpap:110818933 883.248