Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00747 ATGTCCCTCTTACTGCAGTCATTGGTTGAGGTTGTTTTTCCTTTCTTCCGAAGACTCGGTAAGTCCTTAAGCAGTGGTGACGCCAGTTCATCGTTTCTGCTGGAGATGGAAACTTGGCTCAAACCATTCTGGCCGAAGCTTGACCGGCGGAACGCCGTAAAGAACTTTGATCAACCCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCATCTTCTTCTTCTGACTCGAGTCTTCGAACGCGCTTTCTCGACCTTTATCCAACGAGCTTCAGAGTCAAAGGCGATGATGGTGAGCTCGATCTCATTTGTGGACGTTTGGGGCTTTCTAATCCCGATGATTTCTCGATCCCCGCTGCTGAATGGGAAGCCTTACGGTTAGACTACTCCTCTCGTGCCCGCTCAAAGCATCAGAACGGCGATGCTTTAGAGTTTCGCCGATTGTTGCGCAAGGCAAAAAATGATTTTCCATCTCAATTTGATGTCAATTCGAACGTAGTAGGTGGAGTTGAAAATGGACAGAGAGTTGGCGACGAGGATGCCAAATTCAATTCGATCTTATCAAACAAGAGCAAAGCTATGGATGACAGAGGAGAATGCATTTATGTTGTACGGCCTCCTGTTCTTTCTTCTCCTCCGGGAAAATTGCGTTCAGTTGTTGATGACGTTAACTCCACTTGGGAAATTTGCAGATCCTTTGCTCCCAAAGATGACAAACACCCAGCTTGTAATTTAAGTCAAGCTGACGAAAACAAGGCCATATTTAAGGACCGTGAGAGATACGATGGAGGAGTTTGTGGAAGTGGATTGTTTGGTCCCTTGCATTCGGCGAACACAATAAATGGTTACAGTGATGAGTTGAGCTTAGGGGGTCCAACAAATGTTAATGATGATGGTGCTCAGCTCGAATCTAAATTTGTTTCAGAAGCGGCGCATCATTTTACTCCCAATGGGAAATTCAAACGCAAAAATTCTTCATCATGGCAAAAATGTGATCTTTTGGGAAGTGGATCTTTCGGAAGCGTATTTGAGGCGATCACTGACGATGGCTTCTTTTTTGCTGTTAAGGAGGTTTCCTTGCAAACTCAAGGAAGTGATGGAAGGGAGAGCATTCTTCAATTAGAGCAGGAGATTTCTCTTTTAAGTCAGTTCGAACATGAGAACATAGTTCGGTATCTTGGAACAGACAAGGACAGAAATAAATTATATATCTTCCTTGAGCTCCTTCCAAAAGGCTCATTAGCAAAGCTGTATCAAAGGTTTCGCTTGAAGAAGTCTCAAGTTTCAGCATATACGAGGCAGATTTTGGATGGGTTAAATTATCTTCATAAACAGAATATAGTTCACAGAGATATCAAATGTGCTAATATTTTGGTTGACGGAAGTGGATCAGTGAAGCTTGCAGATTTTGGGCTGGCAAAGGCAATCAAATTTAATGATGTTAATTCGTTTAAAGGAACTGCATACTGGATGGCTCCTGAGGTTGTGAATCTACAGACTCGTGGCTATGGGCTTCCAGCTGATATTTGGAGTCTTGGATGTACAGTGTTAGAGATGTTAACTGGTCGACCTCCGTATTCTCAGTTAAATGCCGTGCAAGCATTATTTCAGATTGGGAATAAGGTACTCCCTCCACTTCCTCATTCCTTGTCTGGCGACGCCCGAGATTTCATCCTTAGTTGCTTGCAAGTTGACCCACACAGCCGGCCTAATGCGTCTGAACTGTTAAGTCATCCATTTGTTAGGATGCCGATTTGA 1752 43.84 MSLLLQSLVEVVFPFFRRLGKSLSSGDASSSFLLEMETWLKPFWPKLDRRNAVKNFDQPSSSSSSSSSSSSSSDSSLRTRFLDLYPTSFRVKGDDGELDLICGRLGLSNPDDFSIPAAEWEALRLDYSSRARSKHQNGDALEFRRLLRKAKNDFPSQFDVNSNVVGGVENGQRVGDEDAKFNSILSNKSKAMDDRGECIYVVRPPVLSSPPGKLRSVVDDVNSTWEICRSFAPKDDKHPACNLSQADENKAIFKDRERYDGGVCGSGLFGPLHSANTINGYSDELSLGGPTNVNDDGAQLESKFVSEAAHHFTPNGKFKRKNSSSWQKCDLLGSGSFGSVFEAITDDGFFFAVKEVSLQTQGSDGRESILQLEQEISLLSQFEHENIVRYLGTDKDRNKLYIFLELLPKGSLAKLYQRFRLKKSQVSAYTRQILDGLNYLHKQNIVHRDIKCANILVDGSGSVKLADFGLAKAIKFNDVNSFKGTAYWMAPEVVNLQTRGYGLPADIWSLGCTVLEMLTGRPPYSQLNAVQALFQIGNKVLPPLPHSLSGDARDFILSCLQVDPHSRPNASELLSHPFVRMPI 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12984004 12988817 + Bpe006010.3 Bpe12g00747 112760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00747 583 Pfam Protein kinase domain 328 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00747 583 Gene3D Transferase(Phosphotransferase) domain 1 323 583 - -
Bpe12g00747 583 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Bpe12g00747 583 SUPERFAMILY Protein kinase-like (PK-like) 316 580 IPR011009 -
Bpe12g00747 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 187 580 - -
Bpe12g00747 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 163 - -
Bpe12g00747 583 MobiDBLite consensus disorder prediction 55 75 - -
Bpe12g00747 583 ProSiteProfiles Protein kinase domain profile. 326 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00747 583 SMART serkin_6 326 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00747 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Bpe12g00747 583 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 45 163 - -
Bpe12g00747 583 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 187 580 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00081 Bpe-Chr2:608986 Bpe12g00747 Bpe-Chr12:12984004 5.18E-135 dispersed
Bpe04g00476 Bpe-Chr4:3007360 Bpe12g00747 Bpe-Chr12:12984004 5.81E-23 dispersed
Bpe12g00439 Bpe-Chr12:10156906 Bpe12g00747 Bpe-Chr12:12984004 2.01E-75 dispersed
Bpe12g00747 Bpe-Chr12:12984004 Bpe14g00364 Bpe-Chr14:3471716 1.23E-103 dispersed
Bpe14g00372 Bpe-Chr14:3528628 Bpe12g00747 Bpe-Chr12:12984004 6.61E-26 dispersed
Bpe12g00747 Bpe-Chr12:12984004 Bpe02g01619 Bpe-Chr2:19064137 2.21E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63639 PF00069 Pkinase 1.80E-69 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00747 K13414 - twl:119982499 490.345