Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00765 ATGGAAAATTTTGCGGCCCAGTTGAAGAGGGGGATTTCGAGGCAGTTTTCCACCGGTTCGATTGGACGCAACCTGAGCCGGCAGTTTACGCGCCAGTCGTCGCTTGACCCGAGGCGGAACAATGTGAGATTTAGCTTCGGAAGGCAGTCTTCGCTTGACCCCATCCGGCGCAGCCCTAGCCGTGAGAACGACCTATCCGTGCCTGAGAACCTTGACTCAACCATGAACCTTCTTTTCTTGGCCTGTCGGGGCGACGTCAAGGGAGTCAATGATTTGCTCGATGAGGGGGTCGATGTCAATAGCATCGACTTAGATGGCCGAACTGCGTTGCATATCGCCGCATGCGAAGGCCACGTTGAGGTTGTCAAGCTCTTGCTCAGCCGAAGGGCCAATATGGATGCTCGTGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAACACTATGGGCAGACAGAGGTTTTCAACCTTTTGAAGGCTCGCGGAGCAAAAGTTCCTAAAAACAGGAGGACGCCAATGACGGTTGCAAATCCCCGTGAAGTTCCGGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGAGTGATGGAATCTCCAAGGGCACGTATCAAGTAGCTAAATGGAATGGAACGAAGGTTGCAGTAAAAATACTTGATAAAGAGAGCTACTCAAACCCTGATACTATAATTGCTTTCAGACATGAGTTAGCTCTATTAGAAAAGGTCCGCCATCCTAACGTAGTACAATTTGTTGGAGCAGTTACCCAGAATGTTCCAATGATGATTGTGTCAGAGTATCATTCGAAGGGAGACTTGGCTGGCTATCTTCAAAAGAAACGGCGCTTGTCTCCATCTAAAGCTCTCAGATTTGCTCTTGATATTGCTAGGCATGTCTTGGGAATGAACTATCTTCATGAAGTTAAGCCAGACCCCATTATCCACTGTGATCTAAAGCCAAAAAATATTTTGCTCGACGTTGGAGGTCAATTGAAGGTAGCTGGATTTGGTCTGATAAGGTTGTCAAAAATTTCACCGGACAAAGCAAAACTAGCACTCCCTGAGGCTAACATTGACCTTTCAAGCATATATTTGGCGCCTGAGGTTTACAAGAATGAAATATTTGACAGAAGTGTGGACTCGTTTTCTTTTGGTCTAATTTTATATGAGATGATTGAGGGCATACAACCTTTCCATCCTAAACCTCCGGAAGAGGCTGCAAAAATCATATGTTTGGAAGGAGAAAGACCTCAATTTAAGATCAAATTGAAAAATTATCCACCGGATTTGATAGAGTTAATTGAGGAATGCTGGGATCCAGAACCCGTTGTAAGGCCAACTTTTTCTGAGATTATTGTTCGTTTGGATAAAATAGTGTCCAACTGCTCAAAACAAGGTTGGTGGAAGGACACTTTTAAGCTTCCGTGGTATGTCTTCTAA 1440 45.62 MENFAAQLKRGISRQFSTGSIGRNLSRQFTRQSSLDPRRNNVRFSFGRQSSLDPIRRSPSRENDLSVPENLDSTMNLLFLACRGDVKGVNDLLDEGVDVNSIDLDGRTALHIAACEGHVEVVKLLLSRRANMDARDRWGSTAAADAKHYGQTEVFNLLKARGAKVPKNRRTPMTVANPREVPEYELNPLELQIRRSDGISKGTYQVAKWNGTKVAVKILDKESYSNPDTIIAFRHELALLEKVRHPNVVQFVGAVTQNVPMMIVSEYHSKGDLAGYLQKKRRLSPSKALRFALDIARHVLGMNYLHEVKPDPIIHCDLKPKNILLDVGGQLKVAGFGLIRLSKISPDKAKLALPEANIDLSSIYLAPEVYKNEIFDRSVDSFSFGLILYEMIEGIQPFHPKPPEEAAKIICLEGERPQFKIKLKNYPPDLIELIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPWYVF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13164106 13172832 - Bpe006025.1 Bpe12g00765 112778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00765 479 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Bpe12g00765 479 PRINTS Tyrosine kinase catalytic domain signature 307 325 IPR001245 GO:0004672|GO:0006468
Bpe12g00765 479 PRINTS Tyrosine kinase catalytic domain signature 426 448 IPR001245 GO:0004672|GO:0006468
Bpe12g00765 479 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Bpe12g00765 479 Gene3D Phosphorylase Kinase; domain 1 187 269 - -
Bpe12g00765 479 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 475 - -
Bpe12g00765 479 PIRSF ILK 8 476 - -
Bpe12g00765 479 SMART ANK_2a 138 167 IPR002110 GO:0005515
Bpe12g00765 479 SMART ANK_2a 105 134 IPR002110 GO:0005515
Bpe12g00765 479 SMART ANK_2a 73 101 IPR002110 GO:0005515
Bpe12g00765 479 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 475 - -
Bpe12g00765 479 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Bpe12g00765 479 CDD STKc_MAP3K-like 199 455 - -
Bpe12g00765 479 ProSiteProfiles Protein kinase domain profile. 189 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00765 479 Gene3D Transferase(Phosphotransferase) domain 1 270 471 - -
Bpe12g00765 479 Pfam Ankyrin repeats (3 copies) 78 165 IPR002110 GO:0005515
Bpe12g00765 479 SUPERFAMILY Ankyrin repeat 73 176 IPR036770 -
Bpe12g00765 479 SMART serkin_6 193 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00765 479 Pfam Protein tyrosine and serine/threonine kinase 200 454 IPR001245 GO:0004672|GO:0006468
Bpe12g00765 479 Gene3D - 42 184 IPR036770 -
Bpe12g00765 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Bpe12g00765 479 SUPERFAMILY Protein kinase-like (PK-like) 202 455 IPR011009 -
Bpe12g00765 479 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00765 Bpe-Chr12:13164106 Bpe15g00080 Bpe-Chr15:8520551 0 dispersed
Bpe12g00765 Bpe-Chr12:13164106 Bpe11g01118 Bpe-Chr11:8348827 3.31E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63640 PF07714 PK_Tyr_Ser-Thr 3.30E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00765 - - twl:120005582 817.379