Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00010 ATGAGACCTTTATCTTCCAGTCTTCTTCTGCATTTTTTTGCTTCTTCTTCCTTTCCTTCATCCTCACAGTCCCCTCTTTTCTTGCTTCAGTTTTCGCGCTTTTCAACTTCTTCTTCATTCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGCGGCTCGATGTGGATTCCCGAGATGTGAAGGTTTCAGTGTGGTGGGACTTTGAGAATTGCCATTTGCCTGCTGGAGTGAACGTGTTCAAGGTTTCCCATTTGATTATATCAGCGCTTAGGTTTAATGGAATCAAAGGTCCTGTACAAATTACAGCATTTGGGGATGTATTGCAGCTCTCAAGGACAAATCAGGAGGCTCTCTCCGCAACGGGGATCAATCTTACCCATGTTCCTCAAGGTGGAAAAAATAGTGCTGACAGGTCTCTTCTTGTAGATCTCATGTATTGGGTTTCTCAAAATCCTCCTCCAGCACATCTCCTTTTGATCTCTAGCGACAGGGACTTTGCCAGCATTTTACACCGATTAAGAATGAACAACTACAACATATTGCTTGCAAGTACAGAAAAGGCTCCTGGTGTTCTGTGCAGTGCTGCAAGTATAATGTGGCACTGGAATGCATTGATTAAAGGAGAGACTCTGGTCGGAAAGTGCTTTAACCAACCACCAGATGGTCGATTTGGTTCTTGGTATAATCAACATAAAGGCCCTCTTGAAGATCCCTATACAGCCATGGAGCAACCATCTTATTCGCGAGTAGAAGAGTTGCCTGAGCCAGATTCTGAATCGAAGCTTCGCCCCATTCCAAAGGCTGTCGTGAAGCAGATTCGTCAAATTTTGAAATCGTATCCCAAAGGAGTTTCTCTTTGGGAGCTTCGCTCAGAGTTGGCAAAAAGTAATGTCTCTATCGATAAAGACTTGTATGGTTATAACAGATTTTACCGTTTTCTCTGCTCAATGCCGCAAATCTTAAAGCTTCAACCTTCTGGCGATGGTCAGTATGTAGTATTAGCAGTAAATATGAGATCTATAGAACCTTTAGAGTCTAGTCGAGGTACATCTAGTGAAACTTTCGGTGATGGTAATTCTAATGGTCATAATGTGAGTCTTCTGAGAGAAGATTTTAAACAAAGGTCTCCTTTAGGGAAATCTGAAAGAGAATCTTCAGTTTCCTCGGCTCCTGAGCCCAGTACCATTGAAACTTCAAAGACTTCACAGTCAGATTGTGAAGTACGCAATGTGGTCAGCAGACACGATGTTTCTGGCAATTTGCCATCCATTTCAGGACAAGATTCTGTGTCTGGTGTAGGATTTTTAAGAAAGATTTGGAAGAAATGGTTTAGTGAAGATGATAGTGGTACTGTGAATAAAAGCGGTAGCTTACCTGACAATAGTTATGGTGCTGATGCTACATTGAAGAAGGAAAATCACAACCATGCAGAAAATCATTCTTCTACTGAGAAATGTATGGAAAAAAAAACTGAAGAAAAAGATATGAAATCGACAAGTCAAGATGACCATCATGTTTATGCTTTACTGAGTTGTGAGTTGGTCGTGAAAGATGAAGACAAAACCAGTACAAAGTCGGGTATAATTGTCCGAGTAAGGAAATGGTTCGGTTTTTGGGCCAGTGGACGCAGTGACAAAGTGAGTGATCAATCTTCTGCTCAATTAAACGAAGAAAAAGATCAATCTGGTCATCAGCTGCTTTCTGATAATTCTTTTTGGCATGACCTAGAATCATTCATGAAAACTCCCAAAGCATCAGTTCTCATTTCAGGGTCAAAAACCAGGGAGGAGATGGCACAAAATTTGCAACAGGAAGGACCCTCGGCTCTTAAGTTGCTTGGTCATTGGGTTCTACTTGACCTGGTGGATCTTGTAATAGCAGACAAAAAATGGGTGGAAGAAAACCCATCTGATATCTTGCCTTTCAAGCTAACTCTTTCAGGTCAAAAGAGTGGTTGTGCAGATTCCATCCACGGTTCAACTCAGTTGAGATCAATTTTTACTAACACACCAGTGAAGCCGAACTTGCAAAGATCTCTACGAAGTGATCCAGATAAGAACAATAAAAATGAACTTCAAACAGTTCTTGCCAAAAATAGATCTGCAGAAAGGTCTTCAAGTGAGATATTAGGGGATTGTCAAAAGCTTGTGAATGAGGTTTTAAAAGAACACCCTCAAGGATATAATATGAGCTTCTTTAGAAACCTTTTCTGGGAGAGATATGGATATCATCTTCATGTGAAAAGTCTGGGTTATAAAAAGTTGGCATCCATGCTTGAAACATTACCTGGAGTGAAAATTGAATCCTCTTTTATGTTTCCTTCAAGCCATTCACCTGCGTGTGTTCCCTTTGATGAAAAGAAAGAACTTGATCATATGATGGCAAACTCTGAAGGCGAATCATCGGACTCATTGAGAAAGGATGATGATATTGATTCGCTGTGGGAAGAATTGGGACCTATTGCCAGCACGAGCTTCAGAAGAAACAACGAAGAAAACGTAGGAAGGAGAGGAGGAAAAGCGACCCAGAAATTATCTCGGGTGGAATATGAACCTCCCTTTTCAGATAATTATTTATCAGACTCTGAAGAAGAGAGCCTTTCAGCTCGCTCTGCAGAGAAGATGAAAGAAAGAGAAAAAGAAGAAAATAGCTCCTTGTTGCAAATTCTTGATTCGTGGTACAATCGCAAAGAAGGGCTGGATAAAAAAGAGGACAAGAGGGAGAATTCTGATGGAATGATCGACTGTTCAGCCAACAATTTCATGTCATCCAGTTCATCAGAGGCCGGTGACATAAATGAAACAAGTACCGGAGTTAATGGAAAAGGGAGGGAGAATTCTGATGGGATGATTGACTTTTCTGCCGATAATTTCAAGCCATCAGGAATAGGCAACATAAGTGAAACAAATGGAAGAAAGCAGAGGCCTCAAAAGAGCTACTCTTTTGTGTTAGACCCAGATGAGAATAACAAGGAGAAGCTCATTGATGGCATAATTGATAGCCTGAAGAAATCTAGCGAGTCGAGACTGCGCTACTGA 3042 40.96 MRPLSSSLLLHFFASSSFPSSSQSPLFLLQFSRFSTSSSFHSSSSSSSSSSKRLDVDSRDVKVSVWWDFENCHLPAGVNVFKVSHLIISALRFNGIKGPVQITAFGDVLQLSRTNQEALSATGINLTHVPQGGKNSADRSLLVDLMYWVSQNPPPAHLLLISSDRDFASILHRLRMNNYNILLASTEKAPGVLCSAASIMWHWNALIKGETLVGKCFNQPPDGRFGSWYNQHKGPLEDPYTAMEQPSYSRVEELPEPDSESKLRPIPKAVVKQIRQILKSYPKGVSLWELRSELAKSNVSIDKDLYGYNRFYRFLCSMPQILKLQPSGDGQYVVLAVNMRSIEPLESSRGTSSETFGDGNSNGHNVSLLREDFKQRSPLGKSERESSVSSAPEPSTIETSKTSQSDCEVRNVVSRHDVSGNLPSISGQDSVSGVGFLRKIWKKWFSEDDSGTVNKSGSLPDNSYGADATLKKENHNHAENHSSTEKCMEKKTEEKDMKSTSQDDHHVYALLSCELVVKDEDKTSTKSGIIVRVRKWFGFWASGRSDKVSDQSSAQLNEEKDQSGHQLLSDNSFWHDLESFMKTPKASVLISGSKTREEMAQNLQQEGPSALKLLGHWVLLDLVDLVIADKKWVEENPSDILPFKLTLSGQKSGCADSIHGSTQLRSIFTNTPVKPNLQRSLRSDPDKNNKNELQTVLAKNRSAERSSSEILGDCQKLVNEVLKEHPQGYNMSFFRNLFWERYGYHLHVKSLGYKKLASMLETLPGVKIESSFMFPSSHSPACVPFDEKKELDHMMANSEGESSDSLRKDDDIDSLWEELGPIASTSFRRNNEENVGRRGGKATQKLSRVEYEPPFSDNYLSDSEEESLSARSAEKMKEREKEENSSLLQILDSWYNRKEGLDKKEDKRENSDGMIDCSANNFMSSSSSEAGDINETSTGVNGKGRENSDGMIDFSADNFKPSGIGNISETNGRKQRPQKSYSFVLDPDENNKEKLIDGIIDSLKKSSESRLRY 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 259717 264113 - Bpe006091.1 Bpe13g00010 112790

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 382 408 - -
Bpe13g00010 1013 Gene3D - 705 772 IPR041966 -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 902 988 - -
Bpe13g00010 1013 Pfam NYN domain 62 197 IPR021139 GO:0004540
Bpe13g00010 1013 ProSiteProfiles OST-type HTH domain profile. 710 788 IPR025605 -
Bpe13g00010 1013 CDD PIN_limkain_b1_N_like 62 185 - -
Bpe13g00010 1013 Pfam OST-HTH/LOTUS domain 268 334 IPR025605 -
Bpe13g00010 1013 Pfam OST-HTH/LOTUS domain 715 770 IPR025605 -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 914 944 - -
Bpe13g00010 1013 PANTHER EMB|CAB71880.1 16 920 - -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 474 501 - -
Bpe13g00010 1013 Gene3D - 267 338 IPR041966 -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 831 845 - -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 867 886 - -
Bpe13g00010 1013 Gene3D - 56 204 - -
Bpe13g00010 1013 ProSiteProfiles OST-type HTH domain profile. 266 338 IPR025605 -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 961 978 - -
Bpe13g00010 1013 CDD LOTUS 267 335 - -
Bpe13g00010 1013 CDD LOTUS 711 768 - -
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 827 886 - -
Bpe13g00010 1013 PANTHER LIMKAIN B LKAP 16 920 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bpe13g00010 1013 MobiDBLite consensus disorder prediction 375 408 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00010 - - - qlo:115995124 822.772
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00379 Bpe-Chr7:3303931 Bpe13g00010 Bpe-Chr13:259717 7.38E-25 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1214 . Blo16g00517 . . . Bpe13g00010 . . . Cmo20g01089 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01353 . . . . Bma06g00530 . . . . Cma20g01079 . . . Cpe16g00066 Bhi10g02348 . . . . . . Cla02g00078 Cam02g0081 Cec02g0083 Cco02g0075 Clacu02g0079 Cmu02g0077 Cre02g0417 Lsi10g00700 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005338 1 4 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00010 Bpe_Chr13 FPKM 32.433681 35.433559 34.580296 33.532616 38.017567 32.063568 37.740906 43.737244 45.207283 45.531487