Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00036 TGTTATTTAGGACTACAGTTTGAGAATTCATGTGAAATTGGTGTATTTTCTAAGCTCACAAATGCTTACTGTTTGGTTGCCATTGGAGGCTCGGAGAACTTCTACAGTACTTTTGAAGCTGAATTAGCAGATGTGATTCCTGTTGTTAAAACCTCTATTGGAGGCACTCGTATTATTGGTCGCCTCTGTACTGGTAACAAAAATGGGCTTCTTGTGCCCCATACAACCACTGATCAAGAACTTCAGCATTTGAGGAACAGTCTGCCTGATCAAGTGGTTGTTCAGCGCATAGATGAGAGGCTATCAGCTCTGGGAAATTGTATCGCATGCAATGACCATGTTGCTCTGACCCACACTGATCTTGACCGGGAAACTGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTATTTAGGCAGAGTGTAGCTGGTAATATCCTTGTGGGAAGTTACTGTGTCTTTTCTAACACGGGTGGCCTGGTGCATCCCCATACCTCGATTGAAGATTTGGACGAACTCTCCACGCTTCTTCAAGTCCCCTTGGTGGCAGGCACTGTGAACCGTGGTAGTGAAGTTATTGCAGCTGGCATTACAGTGAATGACTGGACTGCATTTTGTGGATCTGACACTACAGCAACTGAGCTCTCGGTCATAGAGAGCGTTTTCAAGTTGAGAGAGGCTCAACCAAGCACAATAGCCGACGAGATGAGAAAATCTCTCATCGACAGTTACGTA 735 44.9 CYLGLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELADVIPVVKTSIGGTRIIGRLCTGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQSVAGNILVGSYCVFSNTGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGITVNDWTAFCGSDTTATELSVIESVFKLREAQPSTIADEMRKSLIDSYV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1080752 1084724 - Bpe024917 Bpe13g00036 112816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00036 245 PIRSF Transl_init_IF-6 2 226 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 6 224 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 CDD IF6 5 223 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 Gene3D - 3 225 - -
Bpe13g00036 245 SUPERFAMILY Pentein 5 224 - -
Bpe13g00036 245 Pfam eIF-6 family 5 203 IPR002769 GO:0042256|GO:0043022
Bpe13g00036 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 5 245 - -
Bpe13g00036 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 5 245 IPR002769 GO:0042256|GO:0043022
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00036 Bpe15g00415 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00036 Bpe-Chr13:1080752 Bpe15g00415 Bpe-Chr15:15650976 9.86E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00036 K03264 - han:110921574 459.144