Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00046 ATGGCCGAAGTAGAATCACGGGAGAAAGCAGAGGAGTTTGGTGAGTTGGAAGCAGGTTTGCTGGTGGAAGAGCTGAGAAAGAGGTACAGGAGCGGAGTAACGAAGAGCTACGAATGGAGAATGTTGCAGCTGAAGAGGATAGAGACGATGCTTTATGACAGAGAAGAAGACATTTTAGAAGCTCTTTCTGCTGACCTCTCCAAGCCTCACCTTGAAGCCTTCGCCTCTGAGATTTCAATGCCAAGATCCTCGTGTAAGTTGGCGTTAAAAGAGCTCAAAAACTGGATGAAGCCAGAAAAGGTGAAAACTTCGATTGCATCGTTTCCTTCTTCAGCAGAGATAGTGTCTGAACCTCTAGGAGTAGTGCTGATCATCTCTGCATGGAACTTTCCCTTCCTGTTGTCGATCGACCCCGTGATCGGAGCAATAGCAGCAGGGAACTGTCTGGTGTTGAAGCCGTCAGAGTTGGCTCCGAGAACGTCGTTTCTCATGGCAAAGCTGTTTGAGGAGTATTTGGATAACTCTTCCATAAGAGTAGTTGAGGGTGCTGTTTCAGAAGCCTCTGCTTTGCTCCATCAGAAATGGGATAAGATTTTTTATACAGGAGGGTCGAGAGTGGCACGGATTGTGATGACAGCAGCCGCAAAGCACCTTACACCAGTGGTCTTAGAACTGGGTGGTAAGTGCCCAGCTGTTGTTGATTCCGACGTCAATTTACAAGTGGCGACTAGGAGAATAATAGCAGGAAAGTGGGCATGTAACAATGGGCAGGCTTGCATTGGGGTGGACTACATCATCACTACAAAGGATTTTGCTCCCAAATTGATTGATGCGCTTAAGCTCAAGTTAGAAAAATGGTATGGAAAAGATGCGATGGAATCAGATGATATCTCACGGATTGTGTCCTCGACTCACTTCTCGCGCTTGCTAGCATTGCTGGAGGAGGACGGAATCTCTCAGAAAATTGTTTTTGGAGGCCAAACCATCAAGGACAAATTGTCGATAGGGCCAACAATCTTGCTTGATGTACCCGAAGAATCTTTGATGATGAAGGAGGAAATCTTCGGTCCTCTTCTTCCCATTGTCACGGTTGAGAAACTGGAAGAGAGCTTTGAGATCATAAATTCAAAGCCAAAAGCTTTGGCTGCCTATCTCTTCACAAACAATGAAAGCCTGAAGAAGAATTTTGTTCGTAGCATTTCTTCCGGAGGGATGCTCATAAACGACACCGTCCTTCACTTCACGGAATCTGGTTTGCCGTTCGGAGGAGTGGGGGAGAGTGGAATGGGATCATACCATGGCAAGTTTTCTTTCGAGGCATTCAGCCATGAGAAGGCAGTTCTTTACAGGAGATTTGAAGGAGATGCTTCACTCAGATATCCTCCCTACACTCCTCAAAAGGAAAAACTATTGAAAGCTGTTCTTGGTGGCAACATTTTCTCTGTACTTCTTGCTCTCCTTACTTGGTCTAACAAGTAA 1479 45.84 MAEVESREKAEEFGELEAGLLVEELRKRYRSGVTKSYEWRMLQLKRIETMLYDREEDILEALSADLSKPHLEAFASEISMPRSSCKLALKELKNWMKPEKVKTSIASFPSSAEIVSEPLGVVLIISAWNFPFLLSIDPVIGAIAAGNCLVLKPSELAPRTSFLMAKLFEEYLDNSSIRVVEGAVSEASALLHQKWDKIFYTGGSRVARIVMTAAAKHLTPVVLELGGKCPAVVDSDVNLQVATRRIIAGKWACNNGQACIGVDYIITTKDFAPKLIDALKLKLEKWYGKDAMESDDISRIVSSTHFSRLLALLEEDGISQKIVFGGQTIKDKLSIGPTILLDVPEESLMMKEEIFGPLLPIVTVEKLEESFEIINSKPKALAAYLFTNNESLKKNFVRSISSGGMLINDTVLHFTESGLPFGGVGESGMGSYHGKFSFEAFSHEKAVLYRRFEGDASLRYPPYTPQKEKLLKAVLGGNIFSVLLALLTWSNK 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1350644 1354586 + Bpe006133.1 Bpe13g00046 112826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00046 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 445 IPR016162 GO:0016491
Bpe13g00046 492 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 5 491 - -
Bpe13g00046 492 Pfam Aldehyde dehydrogenase family 39 447 IPR015590 GO:0016491
Bpe13g00046 492 PIRSF ALDH 4 486 IPR012394 GO:0006081
Bpe13g00046 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
Bpe13g00046 492 SUPERFAMILY ALDH-like 20 462 IPR016161 GO:0016491
Bpe13g00046 492 PANTHER ALDEHYDE DEHYDROGENASE 5 491 IPR012394 GO:0006081
Bpe13g00046 492 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 252 263 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00009 Bpe-Chr4:92788 Bpe13g00046 Bpe-Chr13:1350644 0 dispersed
Bpe13g00046 Bpe-Chr13:1350644 Bpe13g00428 Bpe-Chr13:11886052 3.16E-145 dispersed
Bpe13g00046 Bpe-Chr13:1350644 Bpe12g00589 Bpe-Chr12:11666187 1.14E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00046 K00128 - jre:108983383 700.279