Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00112 ATGCCTACTCATGATTCTGATCAGCCGCTGTTGCTCGACGAAGAAGAAGAAGAAGAAACAGCTTATGGCTCCGGGGAGAAGATTCATGTGATCGGAATCGGAGAAGATGGCGGTGATTCCGCCGGGACACCGCCATTCTCGTGGAAAAAGCTCTGGCTGTTCACCGGACCTGGGTTTTTAATGAGTATAGCGTTTCTCGATCCGGGGAATTTGGAAGGAGATCTTCAGGCGGGTGCGGTTGCTGGGTATTCGCTTTTGTGGCTGCTGCTGTGGGCTACGGCTATGGGACTCTTGGTGCAGCTACTGGCCGCGAGACTCGGAGTGGCAACTGGGCGGCACTTGGCGGAGCTGTGCCGAGACGAGTACCCTAAGTGGGCGAGGATGGTGCTTTGGGTAATGGCGGAGTTGGCTCTTATAGGGGCTGATATACAGGAGGTCATCGGAAGTGCCATTGCTATAAAGATTTTGAGTAATGGGTTTTTGCCTCTTTGGTCTGGTGTCATCATCACTGCATTAGATTGCTTTGTATTTCTTTTTCTCGAAAACTATGGCGTAAGGAAATTAGAAGCAGTTTTTGCCTTCCTTATAGCTACAATGGCTGTCTCATTTGCATGGATGTTTGGTGAAACAAAGCCTAGTGGAACTGAGCTTCTTCTCGGTATTCTGATTCCGAAACTAAACTCAAGAACAATTCGCCAGGCAGTTGGAGTAGTGGGTTGCATAATCATGCCCCACAATGTATTCTTACACTCGGCTCTGGTTCAATCGAGAGAAATCGACCATCGAAATCGAAGCCGAGTTCGAGAAGCTTTACGATACTACTCTATAGAGTGCACTGTTGCCCTTATCCTCTCCTTCGTCATCAATCTCTTTGTCACAACAGTTTTTGCAAAAGGGTTTTATAACACGGACATAGCTGATAGTATTGGCCTTGTCAATGCCGGCCAGTATCTTCAATCCAAATACGGCGGAGTTTTTCCGATTCTATACATTTGGGGTATTGGCTTACTTGCAGCTGGTCAAAGTAGCACCATTACAGGAACGTATGCTGGACAGTTCATAATGGGAGGGTTCTTGAACTTGGGGATGAAAAAATGGATTCGAGCTCTGATCACTCGAAGCTTTGCGATTGTTCCTACCATGGCGGTTGCCCTTGCGTTCGACACTTCCGAGGATGCTTTGGATGTTCTGAACGAATGGCTTAATGTTCTTCAGTCTATTCAGATCCCTTTTGCTCTTATTCCCCTTCTCTATTTGGTCTCCAAAGAGCAGATCATGGGCACTTTTAAAATCGGACATCTTCTAAAGATGGTCTCCTGGCTGGTGGCTGCTTTGGTGATGGCCATCAATGGGTATCTGTTGGTGGACTTCTTCTCCTCTGAAGTAAATGGAGTTTTCTTCACCTCTGTAGTCGGCGTTTTCACGGCTGCATATGTTGCCTTCATCGTTTATCTCATCTCCCAGAGCATTACAGTTTCATGGTGGATGAAGTTAATGCCGACCAAGACTTCGACAGATTTGGTAATTTAA 1530 46.8 MPTHDSDQPLLLDEEEEEETAYGSGEKIHVIGIGEDGGDSAGTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATAMGLLVQLLAARLGVATGRHLAELCRDEYPKWARMVLWVMAELALIGADIQEVIGSAIAIKILSNGFLPLWSGVIITALDCFVFLFLENYGVRKLEAVFAFLIATMAVSFAWMFGETKPSGTELLLGILIPKLNSRTIRQAVGVVGCIIMPHNVFLHSALVQSREIDHRNRSRVREALRYYSIECTVALILSFVINLFVTTVFAKGFYNTDIADSIGLVNAGQYLQSKYGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLGMKKWIRALITRSFAIVPTMAVALAFDTSEDALDVLNEWLNVLQSIQIPFALIPLLYLVSKEQIMGTFKIGHLLKMVSWLVAALVMAINGYLLVDFFSSEVNGVFFTSVVGVFTAAYVAFIVYLISQSITVSWWMKLMPTKTSTDLVI 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7212742 7214981 + Bpe006221.1 Bpe13g00112 112892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 234 257 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 9 505 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 MobiDBLite consensus disorder prediction 1 21 - -
Bpe13g00112 509 Pfam Natural resistance-associated macrophage protein 72 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe13g00112 509 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 9 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00112 Bpe15g00316 CCT
Bpe13g00112 Bpe15g00316 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00677 Bpe-Chr6:17405797 Bpe13g00112 Bpe-Chr13:7212742 6.20E-105 dispersed
Bpe10g00595 Bpe-Chr10:12862460 Bpe13g00112 Bpe-Chr13:7212742 1.80E-102 dispersed
Bpe13g00112 Bpe-Chr13:7212742 Bpe15g00316 Bpe-Chr15:14663124 0 wgd
Bpe13g00112 Bpe-Chr13:7212742 Bpe02g00446 Bpe-Chr2:2912104 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00112 K21398 - qsu:112033213 812.757