Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00121 ATGATGCAATTCTCCGAAACCCCACCGCCACCGTTGCACCAAATCAGCCCACCACCAAATTCCGCCATGAGCAAAAACCAAATTCAAAGAGGTCGGCCATGGCCGGGATTTCCCACATCCAAGGCATTGGGAAACTTCGGGGACACCAACTGCATGGAACAATTGCTAGTCCACTGCGCCAACGCCATCGAAAGCAACGATGCCACTCTCGCCCAACAGATCCTTTGGGTCCTAAACAACATAGCCCCTCCCGACGGCGACTCAAATCAGAGGCTCACCTCTGGCTTCCTTCGAGCTCTCATTTTGCGCGCAGCCAATAGCGGAAGCTGCAAAATGCTTGCAGCTATGATGAATGCTCGTAACAATCTGGCTATCGACACCCACAAATTCTCTGTCATTGAGCTCGCTAGCTTTGTAGACCTGACACCTTGGTATAGATTCGGCTTCACTGCAGCCAATGCAGCTATTATAGACGCTATTGAAGGGTTCTCTTGTATCCATATTGTGCATTTAAGCTCAACTCATTGCATGCAAATCCCGACGCTAATCGACGCCATTGCTAGTCGTTACGAGGTTCCGCCATTGATAAAGCTCACAGTTGTTTCAGGTGCGACAGAAGATATACCCCCTATACTTGACCTTTCTTTCGACGAATTGGGTTCAAAGCTGGTGAATTTCGCAAGGTATAGAAACGTAGAGATGGAATTTAGAGTCGTTCCTTCTAATTATACAGATGGATTTGCTAACTTGCTCGAACAACTTCGATTGCAAAATTTAGTTTACGCAGAAAGTGGCGAGGCGTTAGTTATAAACTGTCACATGATGCTCCATCATATTCCAGAACAAACCCTTTCTCCAAATCAAAACATTAATCCAAACCCACTATCTTTTGAATCTTCCTCCTCGCTTCGGACAATGTTTTTGAAAGCCATTAGAAGCATAGGGCCCACGATTGTGGTCTTAATTGATGAAGATGCCGACTTGACATCAAATAACTTAGTTAGCAGATTAAGAGCAGCCTTCAACTACTTATGGATTCCTTATGATACAGTTGATACTTTTCTTCCAAAAGGAAGCCATCAGAGGCAGTGGTACGAAGCTGATATTTGCTGGAAGATTGAGAATGTGATAGCCCAAGAGGGTCTTCAGAGAGTTGAGCGACTAGAACCGAAGAGCCGGTGGGTTCAGCGAATGATAAATGCAAATTTTAGAGGGGTTTCGTTTGGGGAAGATGGTGTTGCAGAAGTGAAGTTGATGCTTGATGGGCATTCAGCTGGGTGGGGATTGAAGAAGGAAGATGATGATCTTGTGCTCACATGGAAAGGGCATAACGTTGTTTTTGCAACTGCTTGGGTGCCTGCTTAA 1365 45.57 MMQFSETPPPPLHQISPPPNSAMSKNQIQRGRPWPGFPTSKALGNFGDTNCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSGFLRALILRAANSGSCKMLAAMMNARNNLAIDTHKFSVIELASFVDLTPWYRFGFTAANAAIIDAIEGFSCIHIVHLSSTHCMQIPTLIDAIASRYEVPPLIKLTVVSGATEDIPPILDLSFDELGSKLVNFARYRNVEMEFRVVPSNYTDGFANLLEQLRLQNLVYAESGEALVINCHMMLHHIPEQTLSPNQNINPNPLSFESSSSLRTMFLKAIRSIGPTIVVLIDEDADLTSNNLVSRLRAAFNYLWIPYDTVDTFLPKGSHQRQWYEADICWKIENVIAQEGLQRVERLEPKSRWVQRMINANFRGVSFGEDGVAEVKLMLDGHSAGWGLKKEDDDLVLTWKGHNVVFATAWVPA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7695356 7696720 - Bpe006231.1 Bpe13g00121 112901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00121 454 ProSiteProfiles GRAS family profile. 43 452 IPR005202 -
Bpe13g00121 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 452 IPR005202 -
Bpe13g00121 454 PANTHER SCARECROW-LIKE PROTEIN 32 10 452 - -
Bpe13g00121 454 MobiDBLite consensus disorder prediction 1 34 - -
Bpe13g00121 454 Pfam GRAS domain family 52 451 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00121 Bpe15g00304 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00121 Bpe-Chr13:7695356 Bpe06g00015 Bpe-Chr6:168811 8.88E-44 dispersed
Bpe12g00232 Bpe-Chr12:1953665 Bpe13g00121 Bpe-Chr13:7695356 3.23E-130 transposed
Bpe13g00121 Bpe-Chr13:7695356 Bpe15g00304 Bpe-Chr15:14527373 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22243 PF03514 GRAS 3.50E-87 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00121 - - tcc:18611261 741.495