Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00123 ATGAGTTGCAACGGGTGCAGAGTTCTCAGGAAAGGGTGCAGCGAGTCTTGTATTCTGCGGCCATGTTTGCAGTGGATTGAGAGCGCTGAGGCTCAAGCTCACGCCACCATTTTTGTAGCTAAGTTCTTTGGCCGAGCTGGTCTCATGTCCTTTATCTCCGCCGTGCCTGAATCTCAGAGACCCTCGTTGTTTCAGTCCCTGCTATTCGAAGCGTGTGGGCGGACAGTGAATCCTGTCAATGGCGCCGTCGGGCTTCTCTGGACCGGAAACTGGCATATGTGCCAGCAGGCGGTGGAAACTGTGCTTCGGGGAGGGACTTTGCGGGCTTTGCCGGAGGTTTTCGCCGGAGGAGCGTCTGGTTCCCCTTCTGACGAGGCGTCCGATATGGATTGTACGGACATATGGAAGCTGAGAGATCCGAAATTTAGTTCACGGCTCTCGAATTCTAGAAACAGACCTTCCCCTAACTCCAGGCGATTGGAGGGATTAACGAATCCGCAGCCCCCTCTCACCGATCTCGACCCCCGCCAGACGCCCATTGTGCATGCCAAATTGTTGGGGCAACGAAGGCCAGGAAGCCCATCGATGAACTCGGAGGAATCTGTGACGACAACATGCTTCCAAAACAGTGTGGTCTGCGATCAGTACACACATGGAGGAACGAGAAAGCTTCTCAACTTATTCATCTAA 690 53.91 MSCNGCRVLRKGCSESCILRPCLQWIESAEAQAHATIFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQQAVETVLRGGTLRALPEVFAGGASGSPSDEASDMDCTDIWKLRDPKFSSRLSNSRNRPSPNSRRLEGLTNPQPPLTDLDPRQTPIVHAKLLGQRRPGSPSMNSEESVTTTCFQNSVVCDQYTHGGTRKLLNLFI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7812815 7813603 - Bpe006233.1 Bpe13g00123 112903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00123 229 MobiDBLite consensus disorder prediction 143 176 - -
Bpe13g00123 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 229 - -
Bpe13g00123 229 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Bpe13g00123 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
Bpe13g00123 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bpe13g00123 229 MobiDBLite consensus disorder prediction 146 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01403 Bpe-Chr2:17537492 Bpe13g00123 Bpe-Chr13:7812815 4.53E-54 dispersed
Bpe02g01778 Bpe-Chr2:20105653 Bpe13g00123 Bpe-Chr13:7812815 3.65E-52 dispersed
Bpe13g00123 Bpe-Chr13:7812815 Bpe14g00112 Bpe-Chr14:1585846 5.95E-56 dispersed
Bpe13g00123 Bpe-Chr13:7812815 Bpe05g00043 Bpe-Chr5:766859 4.48E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22244 PF03195 LOB 2.50E-25 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00123 - - rcu:8283348 303.523