Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00128 ATGGGATCATTTGATGAATACTGTAAGGTGCACGGGATCAAGCGTGAAAGATCTGTTCCAAAGACTCTTCAACAAAATGGTGTTGCAGAAAGAATGAACAGAACGATCGTAGAGAAGATAAGGTGCATGTTATCACATTCAAAACTTCCCAAAACATTTTGCGGAGAAGCAATGACTATTGCAGTAAATATAATCAACTTATCTCCATCAACACCTTTGAATGGAGAAGTGCCAAACAGACTATGGAATGGAAAAGGAGACATTAACTCCAAAAGATCAACATCATGGTATTTGGTTACATTTAGAGGGGGAGCAGTTTCATGGCAATCTAAGCGGAAAAAATCAGTGGCATTGTCGACGACAGAAGTTGAGTTCATGGCGGCTACAGAAGCCTGTAAAGAAATTTTATGGATGCAAGAAAAGTTGAGAATTGCAGTTTTGGTTTCGAAAGCCGCATTTCAATTTATCCAAGGTTCCCATAATTTGTTTCATGATCCTGCAGGTGTTCATCCTAGTGATTACACTGTGCTAGAAGAGGTTAAAGAGGCTGGTTTTCAAATTTGTGGGGACGAATTGGGATCCATTGTCGAAGGCCATGATCTGAAGAAGCTTAAATTTCATGGTGGGGTTTCTGGTATTGCAGAAAAGCTCTCCACATCGACAACAAACGGGCTTTCTGTTGATTCTGCTTTGCTGAGTCGGAGGCAAGAGATCTACGGAGTCAATAGATTCACGGAGAGTGAATCTAGGAGTTTCTTCGTATTCGTATGGGAAGCCCTTCAAGACATGACTCTCATGATTCTAGGAGTTTGCGCATTTGTGTCACTGATCGTTGGGATTATCATGGAAGGATGGCCAAAAGGGGCCCACGACGGGCTCGGCATTGTTGCCAGCATCTTGCTGGTTGTGTTCGTCACTGCAACTAGTGATTATCGCCAGTCTTTGCAGTTCAAGGATTTGGACAAGGAGAAAAAGAAGATATCGATTCAAGTTACGAGAGGTGGTTATAGGCAGAAAATGTCAATATACGACCTACTTCCGGGCGATATTGTTCATCTCTCCATAGGAGACCAAGTCCCAGCTGACGGATTATTTATTTCAGGATTCTCTGTGCTAATTGACGAATCCAGTTTGACCGGGGAGAGTGAGCCTGTAATGGTCAGTTCTCAGAGTCCGTTTCTCCTTTCCGGAACCAAGGTTCAAGACGGATCGTGCAAGATGATCGTTACTACTGTTGGCATGAGAACTCAATGGGGTAAATTGATGGCTACCCTCAGTGAGGGTGGAGATGATGAAACTCCATTGCAGGTTAAATTAAATGGAGTGGCAACTATTATTGGAAAAATTGGTCTTTTCTTTGCTGTGGTAACTTTTGCTGTATTGGTTCAAGGGTTGTTTAACAGTAAAATTCGAGAGGGTACACACTGGAGCTGGTCCGGAGATGATGCCCTGCAAATGCTTGAATTCTTTGCTATTGCAGTTACAATTGTTGTCGTGGCTGTACCAGAAGGGCTGCCATTGGCCGTGACCTTGAGCCTTGCCTTTGCCATGAAAAAGATGATGAACGATAAAGCACTGGTTCGACATCTTGCAGCCTGTGAGACAATGGGATCGGCCACAAGTATCTGTAGCGACAAGACTGGAACATTAACGACCAATCACATGACTGTTGTCAAATCATGCATTTGTATGAATGTGGAAAATGCCGAAAAGGCTTCCGTCTTGAGCTCAACTCTCCCTGAATCTGCTAAGAAGTTACTTCTTCAGTCAATATTCAACAACACTGGAGGAGAAGTGGTGGTGAACAAAGATGGAAAGCGCGAGATTTTGGGAACACCAACCGAGACTGCATTATTAGAATTTGGTTTGTCACTTGGTGGAGATTTTCTGACTGAGAGGCAAGCCTGTAAGCTTCTTAAAGTTGAGCCATTCAACTCTCTGAAAAAGCGAATGGGAGTAATGATCGAACTTCCCGAAGGTGGCTTAAGAGCTCATACAAAAGGTGCTTCAGAAATAGTTCTAGCTGCCTGCGAAAAAGTCGTAAATTCAAATGGGGAGATCGTGCCTCTCGATGAAGGATCCATTAAGCATCTCAACAGCACTATCGATCAGTTCGCAAATGAAGCTCTCCGAACTCTATGCCTTGCCTACATGGAACTTGAAAATGGAGTCTCTGTAGACAATCCTATTCCCTCTACTGGTTTTACTTGTATAGGAATTGTGGGTATTAAAGATCCAGTTCGTCCTGGCGTAAAGGAGTCAGTGGCCATATGTCGTTCATCGGGCATAACTGTGAGAATGGTTACCGGAGATAATATCAATACGGCTAAAGCCATAGCTAGGGAATGTGGGATTCTCACTGACGATGGCTTAGCTATAGAAGGTCCAGATTTTCGAGAGAAGAGCCAGAAGGAGTTGCTTGAACTTATTCCTAAAATTCAGGTGATGGCTAGATCTTCACCTCTAGATAAGCATACACTTGTGAAACACCTGCGAACCACATTTGATGAAGTTGTTGCTGTAACTGGTGATGGAACAAATGATGCTCCAGCCCTCCATGAAGCAGATATTGGACTTGCTATGGGCATTGCTGGGACTGAGGTTGCTAAAGAGAGTGCTGATGTCATTATTCTGGATGATAATTTCTCTACAATCGTCACTGTGGCAAAATGGGGTCGTTCAGTTAACGTAAACATTCAAAAATTTGTACAGTTTCAGCTGACAGTTAACATCGTCGCATTGATAGTTAACTTCTCATCAGCATGTTTAACAGGGACTGCTCCGCTGACAGCCGTTCAACTTTTGTGGGTGAACATGATTATGGACACTTTAGGTGCACTAGCTCTTGCAACTGAGCCGCCAAATGATGAACTAATGAAGCGAACCCCAGTGGGAAGAAAAGGAAATTTCATTAGCAATGTTATGTGGAGGAACATCTTAGGACAGTCCTTGTATCAGTTTTTGGTTATATGTCTTCTTCAGGCGAAAGGAAAAGCAATGTTCGGTCTTCTCGGCCCAGATTCCGAGCTGATCCTCAATACCCTTATCTTCAATTCGTTTGTTTTCTGTCAGATTTTCAACGAAGTAAGTTCACGCGAGATGGAAGAAATAGATGTCTTCAAAGGCATTCTCGATAACTATGTCTTTGTTGGTGTTCTCACTTGCACGGTCCTCTTCCAAATCATAATCATCGAGTTTCTAGGAACCTTTGCCAATACCACACCCCTTACTTTGGCTCAATGGTTTGTTAGTGTACTTGTTGGGTTTTTGGGGATGCCGATTGCGGCTTGGTTAAAGACGATTCCAGTGTAA 3312 43.12 MGSFDEYCKVHGIKRERSVPKTLQQNGVAERMNRTIVEKIRCMLSHSKLPKTFCGEAMTIAVNIINLSPSTPLNGEVPNRLWNGKGDINSKRSTSWYLVTFRGGAVSWQSKRKKSVALSTTEVEFMAATEACKEILWMQEKLRIAVLVSKAAFQFIQGSHNLFHDPAGVHPSDYTVLEEVKEAGFQICGDELGSIVEGHDLKKLKFHGGVSGIAEKLSTSTTNGLSVDSALLSRRQEIYGVNRFTESESRSFFVFVWEALQDMTLMILGVCAFVSLIVGIIMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRGGYRQKMSIYDLLPGDIVHLSIGDQVPADGLFISGFSVLIDESSLTGESEPVMVSSQSPFLLSGTKVQDGSCKMIVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFNSKIREGTHWSWSGDDALQMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKSCICMNVENAEKASVLSSTLPESAKKLLLQSIFNNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFLTERQACKLLKVEPFNSLKKRMGVMIELPEGGLRAHTKGASEIVLAACEKVVNSNGEIVPLDEGSIKHLNSTIDQFANEALRTLCLAYMELENGVSVDNPIPSTGFTCIGIVGIKDPVRPGVKESVAICRSSGITVRMVTGDNINTAKAIARECGILTDDGLAIEGPDFREKSQKELLELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVNVNIQKFVQFQLTVNIVALIVNFSSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRTPVGRKGNFISNVMWRNILGQSLYQFLVICLLQAKGKAMFGLLGPDSELILNTLIFNSFVFCQIFNEVSSREMEEIDVFKGILDNYVFVGVLTCTVLFQIIIIEFLGTFANTTPLTLAQWFVSVLVGFLGMPIAAWLKTIPV 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8265134 8279576 - Bpe006243.1 Bpe13g00128 112908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00128 1103 Pfam Cation transporter/ATPase, N-terminus 207 275 IPR004014 -
Bpe13g00128 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 483 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00128 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 813 926 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00128 1103 Pfam haloacid dehalogenase-like hydrolase 826 882 - -
Bpe13g00128 1103 Pfam Cation transporting ATPase, C-terminus 927 1100 IPR006068 -
Bpe13g00128 1103 Gene3D - 224 426 - -
Bpe13g00128 1103 PRINTS H+-transporting ATPase (proton pump) signature 842 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00128 1103 PRINTS H+-transporting ATPase (proton pump) signature 874 899 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00128 1103 PRINTS H+-transporting ATPase (proton pump) signature 698 716 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00128 1103 SFLD p-type atpase 525 894 IPR044492 -
Bpe13g00128 1103 Pfam Cation transport ATPase (P-type) 602 679 - -
Bpe13g00128 1103 SFLD C1.7: P-type atpase like 525 894 - -
Bpe13g00128 1103 SUPERFAMILY HAD-like 542 947 IPR036412 -
Bpe13g00128 1103 SUPERFAMILY Calcium ATPase, transduction domain A 329 423 IPR008250 -
Bpe13g00128 1103 SUPERFAMILY Calcium ATPase, transmembrane domain M 207 1102 IPR023298 -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 739 750 - -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 866 878 - -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 374 388 - -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 543 557 - -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 842 861 - -
Bpe13g00128 1103 PRINTS P-type cation-transporting ATPase superfamily signature 761 771 - -
Bpe13g00128 1103 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 549 751 IPR023299 GO:0000166
Bpe13g00128 1103 SMART Cation_ATPase_N_a_2 206 280 IPR004014 -
Bpe13g00128 1103 ProSitePatterns E1-E2 ATPases phosphorylation site. 545 551 IPR018303 -
Bpe13g00128 1103 Gene3D - 553 746 IPR023299 GO:0000166
Bpe13g00128 1103 CDD P-type_ATPase_Ca_PMCA-like 232 975 - -
Bpe13g00128 1103 Pfam E1-E2 ATPase 327 521 - -
Bpe13g00128 1103 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 202 1103 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bpe13g00128 1103 PANTHER CALCIUM-TRANSPORTING ATPASE 1 86 1102 - -
Bpe13g00128 1103 CDD RNase_HI_RT_Ty1 86 143 - -
Bpe13g00128 1103 Gene3D - 540 887 IPR023214 -
Bpe13g00128 1103 Gene3D - 2 89 IPR036397 GO:0003676
Bpe13g00128 1103 Gene3D - 258 1097 - -
Bpe13g00128 1103 PANTHER CATION TRANSPORTING ATPASE 86 1102 - -
Bpe13g00128 1103 ProSiteProfiles Integrase catalytic domain profile. 1 86 IPR001584 GO:0015074
Bpe13g00128 1103 SUPERFAMILY Ribonuclease H-like 4 79 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00158 Bpe-Chr4:1026710 Bpe13g00128 Bpe-Chr13:8265134 0 dispersed
Bpe04g01408 Bpe-Chr4:20754463 Bpe13g00128 Bpe-Chr13:8265134 0 dispersed
Bpe13g00059 Bpe-Chr13:1831580 Bpe13g00128 Bpe-Chr13:8265134 7.60E-17 dispersed
Bpe13g00128 Bpe-Chr13:8265134 Bpe13g01096 Bpe-Chr13:16486021 0 dispersed
Bpe13g00128 Bpe-Chr13:8265134 Bpe02g00452 Bpe-Chr2:2956560 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00128 K01537 - jre:108988565 1637.85