Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00157 ATGGCGGAATCTGCAGAACTGGAGCATCCCATCAAAGCATTTGGCTGGGCTGCGAGAGATTCTGCTGGTCTCCTCTCTCCTTTCCGGTTCTCAAGAAGAGCCACCGGAGAGAAGGACGTCAGGTTTAAAGTGCTTTACTGTGGGGTTTGTCACTCCGACGTTCACATGGTCAAGAACGAATGGGGAATATCCATCTTTCCCGTCGTACCAGGGCATGAGGTTGTGGGTAAAGTGACAGAAGTTGGCAACAAAGTAGAGAAGTTCAAGGTCGGAGATAGGGTGGGTGTTGGATGCTATGTCGGATCGTGCCGCTCATGCGACGATTGTTCGAACAACCTCGAAAATTACTGTAAAAAAGCGGTTCTCACCTATGCGGCAAAACACTTCGACGGCACCACCACATACGGAGGCTACTCCGACCACATGGTGACGGATGAACAGTTCGTCGTTCGGATTCCAGACAGCCTCCCGCTGGATGCCTGTGCGCCGTTGTTATGCGCTGGCATCACTGTTTACAGCCCAATGAGGTATTACGGGCTTGATAAACCTGGATTGCACGTTGGCGTCGTCGGCCTCGGCGGCGTCGGCCATGTTGCCGTGAAGTTTGCCAAGGCATTCGGAGCTAAGGTCACAGTGATTAGCACGTCGGCTAATAAAAAGGAGGAGGCTCTTCAACGTCTCGGCGCCGACTCCTTTTTGATTAGCCGTAATCAAGATGAAATACAGGCTGCCATGGGCACGCTTGATGGAATCATCGACACTGTCCCTGCAGTTCATTCTTTTCTTCCTCTACTTGGACTTTTGAAATCACATGGAAAGCTTATTTTGTTGGGCCTACCAGAAAAACCTTTTGAACTTCCATCAATTCCTCTAATTACCGGCAGGAAAACGGTGGCCGGAAGTTCCACCGGAGGTCTGAAGGAGACCCAAGAAATGATAGATTTTGCTGCCAAACACAACATAACGGCGGACATCGAGGTTATCCCGATCGACTACGTGAATACGGCCATGGAAAGGCTCCTGAAAGCGGATGTCAAATACAGATTCGTTATCGATGTTGGCAACACATTGGGT 1074 50.28 MAESAELEHPIKAFGWAARDSAGLLSPFRFSRRATGEKDVRFKVLYCGVCHSDVHMVKNEWGISIFPVVPGHEVVGKVTEVGNKVEKFKVGDRVGVGCYVGSCRSCDDCSNNLENYCKKAVLTYAAKHFDGTTTYGGYSDHMVTDEQFVVRIPDSLPLDACAPLLCAGITVYSPMRYYGLDKPGLHVGVVGLGGVGHVAVKFAKAFGAKVTVISTSANKKEEALQRLGADSFLISRNQDEIQAAMGTLDGIIDTVPAVHSFLPLLGLLKSHGKLILLGLPEKPFELPSIPLITGRKTVAGSSTGGLKETQEMIDFAAKHNITADIEVIPIDYVNTAMERLLKADVKYRFVIDVGNTLG 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9324133 9326144 + Bpe024928 Bpe13g00157 112937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00157 358 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 5 357 - -
Bpe13g00157 358 Gene3D - 167 323 - -
Bpe13g00157 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Bpe13g00157 358 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Bpe13g00157 358 SUPERFAMILY GroES-like 20 184 IPR011032 -
Bpe13g00157 358 CDD CAD1 14 352 - -
Bpe13g00157 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bpe13g00157 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Bpe13g00157 358 Gene3D - 16 353 - -
Bpe13g00157 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Bpe13g00157 358 PANTHER ALDEHYDE REDUCTASE 5 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00384 Bpe-Chr11:2921264 Bpe13g00157 Bpe-Chr13:9324133 6.69E-112 dispersed
Bpe13g00157 Bpe-Chr13:9324133 Bpe15g00392 Bpe-Chr15:15445271 4.97E-164 dispersed
Bpe13g00157 Bpe-Chr13:9324133 Bpe13g00158 Bpe-Chr13:9343381 0 tandem
Bpe10g00041 Bpe-Chr10:622569 Bpe13g00157 Bpe-Chr13:9324133 4.42E-143 wgd
Bpe13g00157 Bpe-Chr13:9324133 Bpe15g00268 Bpe-Chr15:14055802 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00157 - K23232 qsu:112006220 570.852