Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00158 ATGGCGGAATCTGTAGAAATGAATCTTCCCAATAAGGCATTTGGCTGGGCTGCGAGAGATACTTCTGGTGTTCTCTCTCCTTTCCATTTCTCGAGAAGAGCAACGGGAGAGAAGGATGTCAAATTTAAGGTGCTTTACTGTGGGGTGTGTCATTCCGACTTTCACATGGCCAAGAACGATTGGGGAATATCCACCTATCCTGTCGTACCAGGACATGAGGTCGTAGGTATAGTGACAGAGGTTGGCAACAAAGTAGAGAAGTTTAAGGTCGGAGACAGGGTGGGGGTGGGATGCTATGTCGGATCGTGCCGCTCGTGCGACGATTGTTGGAACAACCTCGAAAATTACTGCCAAAAAGCGATGTTCACCTACGGAACCAAATACTTCGACGGCACCACCACATACGGAGGCTACTCCGACCACATGGTGACCGATGAACAGTTTGTCGTTCGCATTCCGGACAGTCTCCCACTGGATGCTTCTGCGCCGTTGTTATGCGCTGGCATCACTGTTTACAGCCCGTTGAGGTATTACGGGCTCGATAAGCCTGGATTGCGGGTTGGTGTTGTAGGCCTCGGCGGCGTCGGTCATGTTGCCGTAAAATTTGCCAAGGCGTTCGGCGCTAAGGTCACAGTGATTAGCACATCAGCTAATAAAAAGAAGGAGGCTCTTCAACGTCTTGGTGCTGACTCCTTTTTGATTAGCCATAATCAAGAAGAATTACAGGCCGCCATGGGCACGTTTGATGGTATCCTCGACACTGTCTCTGCAGTTCATTCTCTTCTTCCTCTACTCGGACTTTTGAAATCACATGGAAAACTTATTTTGCTGGGAATACCAGATAAGCCTTTTGAACTTCCGTCGTTTCCCCTCGCTATCGGCAGGAAAATGGTGGCCGGAAGTGCCGCCGGGGGTCTGAAGGAGACCCAAGAAATGATAGATTTTGCGGCCAAACACAACATAACGGCGGACATCGAGGTTATCCCGATTGACTACGTGAATACCGCCGTGGAGAGGCTTCTGAAAGCAGATGTTAAATATCGATTCGTTATCGATATTGGCAACACCTTGGGTTGA 1077 49.3 MAESVEMNLPNKAFGWAARDTSGVLSPFHFSRRATGEKDVKFKVLYCGVCHSDFHMAKNDWGISTYPVVPGHEVVGIVTEVGNKVEKFKVGDRVGVGCYVGSCRSCDDCWNNLENYCQKAMFTYGTKYFDGTTTYGGYSDHMVTDEQFVVRIPDSLPLDASAPLLCAGITVYSPLRYYGLDKPGLRVGVVGLGGVGHVAVKFAKAFGAKVTVISTSANKKKEALQRLGADSFLISHNQEELQAAMGTFDGILDTVSAVHSLLPLLGLLKSHGKLILLGIPDKPFELPSFPLAIGRKMVAGSAAGGLKETQEMIDFAAKHNITADIEVIPIDYVNTAVERLLKADVKYRFVIDIGNTLG 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9343381 9344907 + Bpe006277.1 Bpe13g00158 112938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00158 358 SUPERFAMILY GroES-like 20 184 IPR011032 -
Bpe13g00158 358 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 6 357 - -
Bpe13g00158 358 CDD CAD1 14 352 - -
Bpe13g00158 358 PANTHER ALDEHYDE REDUCTASE 6 357 - -
Bpe13g00158 358 Gene3D - 167 323 - -
Bpe13g00158 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bpe13g00158 358 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Bpe13g00158 358 Gene3D - 16 353 - -
Bpe13g00158 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Bpe13g00158 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Bpe13g00158 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00158 Bpe-Chr13:9343381 Bpe15g00268 Bpe-Chr15:14055802 0 dispersed
Bpe13g00157 Bpe-Chr13:9324133 Bpe13g00158 Bpe-Chr13:9343381 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00158 - - qsu:112006220 562.377