Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g00184 | ATGCCTGTATATGATCTTCCTCACAAAATCCTCTGCCGAGTGGCTAATGTAGTATTGAAGGCTGAACCAGATACAGATGAGGTCTTTGCCCAAGTTACCTTGCTTCCAGAACCGAATCAAGGTGAGAATGCCGTGGAAAAGGAGTCTCCTCCACCACCTTCCTCGCGATTTCATGTACAGTCATTTTGCAAAACTCTTACGGCCTCAGATACTAGTACACATGGCGGATTTTCTGTTCTGAGGAGGCATGCAGATGAATGCCTTCCTCCCCTGGACATGTCACGGCAGCCTCCTACTCAGGAACTGGTGACCAAGGATTTGCATGGGAATGAATGGCGCTTTCGGCATATTTTTCGGGGTCAACCAAGAAGGCATTTGCTTCAAAGTGGTTGGAGTGTATTTGTCAGCTCCAAGAGACTTGTCGCAGGAGATGCATTCATCTTTTTAAGGGGTGAGAATGGAGAACTTCGTGTTGGTGTTAGACGGGCAATGAGACAGCAGGGTAACATCCCATCATCTGTCATATCCAGTCATAGTATGCACCTTGGTGTCCTTGCAACTGCTTGGCATGCAATTTCAACTGGAACCATGTTCACTGTTTATTACAAGCCTAGGATAAGTCCTTCAGAATTCATTGTTCCATATGAGCAATACATGGAATCTATGAAGAAGGCTTACTCAATAGGCATGAGATTCAAAATGAGATTTGAAGGAGAAGAAGCTCCAGAACAGAGATTCACTGGTACTGTTGTTGGAATTGAAGATTCTGATCCCAAAAAGTGGAGAGGTTCCAAGTGGAGATGCCTTAAGGTGAGATGGGACGAGACTTCTACCATTCCTCGTCCTGATAGAGTGTCTCCGTGGAAAATTGAACCTGCTCTTACTCCTCCAGCATTAAATCCCATGCCAGTGCCTAGGCCAAAAAGGCCGCGATCGAACATGGTTCCCACTTCCTCCGAGTCTTCTGTCCTTACTAGGGAAGGTTCATCTAGGGTAGACCCTCCAGCAAGTGGGTTTTCAAGGGTCTTGCAAGGTCAAGATTTTTCGATCTTGAGAGACAACATTATCGAAAGTAATGAAGGTGAAGCTGCAGAGAAGTCTGTTGTTTGGCCACCTTCATTAGATGATGAGAAGAGTGATATGATATCTGCTTCAAGGAGATTTAGAGCAGAGAACTGGGTCCCTTCTAGAAGCAGTGAACCAACCTACACAGATTTGTTATCGGGTTTTGGGGCCAATGAAGAGTATTCCCATGGGGTTCCTACTACATTTGCTGATCCAATAGTTCAAACTTCCAACTCTGTGAGGAAACATGTACTTGGTCAGGATGGTAAGTCTACCGTTCTTGGCAACCCATGGCCCGTAATATCTTCTGGTCTCTCACTCACATTAGCAGACTCTAATCAGAAGGGTTTTGTTTGTGCTGGTGATATCTCGTTTCAAGCACGGGTGAATAATAGATATGGCAACCTTCTCAATAATCATACCATACTTGAGGGCCATAAATTTGAAAATTCTCCTAGTTGTTGGTTGATGCCTCCGCCATTGCCATCTAATCCTGATAATTCAGTTATTTCAAGAGAGCAAAGGAGAAAAAGCATATTGGCACAGAAGCAGGAGGCTGTGAAACCCAAAGATGGAAATTGCAAGATCTTTGGTATTTCCCTCATCAGGAACCCTATGACACCAGGTCCTGCAGTATCAAATAGAGAAATTATAAACGAGCCAGTTATTCAGATGCACCAGATTCCCCCAGATTATACCTGTGAACAAAAGTCTGAAGAGCAGAAATGCCCGGCATCTGCTGGTAATCGGCTTTCTGCTAATGAACCTGACAAACAACCACAAACCAATGAAATACATGCAAGGGATGTTCAAAGTAAAGGGCAAAGTGTGTCATCTAGGAGTTGTACTAAGGTCCATAAGCAGGGTATTGCACTTGGAAGGTCAGTGGATCTCAGTAAGTTCAACAACTACGATGAACTTACTGCTGATTTGGATCAGTTGTTTGAATTTGGGGGTGAGTTAGCTGCTCCGACAAAGAATTGGCTTATTGTTTACACCGATGATGAAGGTGACATGATGCTTGTTGGAGATGATCCGTGGCAGGAATTTTGTGGCATGGTTCGCAAAATTTATATATATACTAGAGAGGAGGTTCAAAGGATGAATCCAGTGTCCTTAACTATGAAAGCAGAGGAGTCTACATCAGTTGACGTTGAAGATTCAAATGAGGCTAAATGTCAGGCTTTATCTTCAGCAGAAATTTCGTAA | 2274 | 43.84 | MPVYDLPHKILCRVANVVLKAEPDTDEVFAQVTLLPEPNQGENAVEKESPPPPSSRFHVQSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVTKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNIPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRISPSEFIVPYEQYMESMKKAYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKKWRGSKWRCLKVRWDETSTIPRPDRVSPWKIEPALTPPALNPMPVPRPKRPRSNMVPTSSESSVLTREGSSRVDPPASGFSRVLQGQDFSILRDNIIESNEGEAAEKSVVWPPSLDDEKSDMISASRRFRAENWVPSRSSEPTYTDLLSGFGANEEYSHGVPTTFADPIVQTSNSVRKHVLGQDGKSTVLGNPWPVISSGLSLTLADSNQKGFVCAGDISFQARVNNRYGNLLNNHTILEGHKFENSPSCWLMPPPLPSNPDNSVISREQRRKSILAQKQEAVKPKDGNCKIFGISLIRNPMTPGPAVSNREIINEPVIQMHQIPPDYTCEQKSEEQKCPASAGNRLSANEPDKQPQTNEIHARDVQSKGQSVSSRSCTKVHKQGIALGRSVDLSKFNNYDELTADLDQLFEFGGELAAPTKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPVSLTMKAEESTSVDVEDSNEAKCQALSSAEIS | 757 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9759644 | 9763254 | + | Bpe006304.1 | Bpe13g00184 | 112964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 742 | 757 | - | - | |
Bpe13g00184 | 757 | Gene3D | - | 59 | 164 | IPR015300 | - | |
Bpe13g00184 | 757 | ProSiteProfiles | PB1 domain profile. | 635 | 717 | IPR000270 | GO:0005515 | |
Bpe13g00184 | 757 | PANTHER | AUXIN RESPONSE FACTOR 2 | 2 | 742 | - | - | |
Bpe13g00184 | 757 | SUPERFAMILY | DNA-binding pseudobarrel domain | 59 | 191 | IPR015300 | - | |
Bpe13g00184 | 757 | SMART | B3_2 | 62 | 164 | IPR003340 | GO:0003677 | |
Bpe13g00184 | 757 | SUPERFAMILY | CAD & PB1 domains | 631 | 712 | - | - | |
Bpe13g00184 | 757 | Pfam | Auxin response factor | 188 | 270 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 35 | 56 | - | - | |
Bpe13g00184 | 757 | Gene3D | - | 225 | 295 | - | - | |
Bpe13g00184 | 757 | CDD | B3_DNA | 61 | 162 | IPR003340 | GO:0003677 | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 294 | 310 | - | - | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 288 | 339 | - | - | |
Bpe13g00184 | 757 | ProSiteProfiles | B3 DNA-binding domain profile. | 62 | 164 | IPR003340 | GO:0003677 | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 737 | 757 | - | - | |
Bpe13g00184 | 757 | Pfam | B3 DNA binding domain | 62 | 163 | IPR003340 | GO:0003677 | |
Bpe13g00184 | 757 | Pfam | AUX/IAA family | 682 | 720 | IPR033389 | - | |
Bpe13g00184 | 757 | Pfam | AUX/IAA family | 615 | 671 | IPR033389 | - | |
Bpe13g00184 | 757 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 2 | 742 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bpe13g00184 | 757 | Gene3D | - | 630 | 724 | - | - | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 312 | 328 | - | - | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 594 | 637 | - | - | |
Bpe13g00184 | 757 | MobiDBLite | consensus disorder prediction | 588 | 637 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00952 | Bpe-Chr4:6416456 | Bpe13g00184 | Bpe-Chr13:9759644 | 1.39E-26 | dispersed | |
Bpe06g00495 | Bpe-Chr6:16189131 | Bpe13g00184 | Bpe-Chr13:9759644 | 1.78E-112 | dispersed | |
Bpe13g00184 | Bpe-Chr13:9759644 | Bpe08g00619 | Bpe-Chr8:5031688 | 7.55E-16 | dispersed | |
Bpe13g00184 | Bpe-Chr13:9759644 | Bpe05g01038 | Bpe-Chr5:22955782 | 7.15E-29 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22254 | PF02362 | B3 | 3.30E-21 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g00184 | - | - | vvi:100268072 | 1076.62 |