Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00184 ATGCCTGTATATGATCTTCCTCACAAAATCCTCTGCCGAGTGGCTAATGTAGTATTGAAGGCTGAACCAGATACAGATGAGGTCTTTGCCCAAGTTACCTTGCTTCCAGAACCGAATCAAGGTGAGAATGCCGTGGAAAAGGAGTCTCCTCCACCACCTTCCTCGCGATTTCATGTACAGTCATTTTGCAAAACTCTTACGGCCTCAGATACTAGTACACATGGCGGATTTTCTGTTCTGAGGAGGCATGCAGATGAATGCCTTCCTCCCCTGGACATGTCACGGCAGCCTCCTACTCAGGAACTGGTGACCAAGGATTTGCATGGGAATGAATGGCGCTTTCGGCATATTTTTCGGGGTCAACCAAGAAGGCATTTGCTTCAAAGTGGTTGGAGTGTATTTGTCAGCTCCAAGAGACTTGTCGCAGGAGATGCATTCATCTTTTTAAGGGGTGAGAATGGAGAACTTCGTGTTGGTGTTAGACGGGCAATGAGACAGCAGGGTAACATCCCATCATCTGTCATATCCAGTCATAGTATGCACCTTGGTGTCCTTGCAACTGCTTGGCATGCAATTTCAACTGGAACCATGTTCACTGTTTATTACAAGCCTAGGATAAGTCCTTCAGAATTCATTGTTCCATATGAGCAATACATGGAATCTATGAAGAAGGCTTACTCAATAGGCATGAGATTCAAAATGAGATTTGAAGGAGAAGAAGCTCCAGAACAGAGATTCACTGGTACTGTTGTTGGAATTGAAGATTCTGATCCCAAAAAGTGGAGAGGTTCCAAGTGGAGATGCCTTAAGGTGAGATGGGACGAGACTTCTACCATTCCTCGTCCTGATAGAGTGTCTCCGTGGAAAATTGAACCTGCTCTTACTCCTCCAGCATTAAATCCCATGCCAGTGCCTAGGCCAAAAAGGCCGCGATCGAACATGGTTCCCACTTCCTCCGAGTCTTCTGTCCTTACTAGGGAAGGTTCATCTAGGGTAGACCCTCCAGCAAGTGGGTTTTCAAGGGTCTTGCAAGGTCAAGATTTTTCGATCTTGAGAGACAACATTATCGAAAGTAATGAAGGTGAAGCTGCAGAGAAGTCTGTTGTTTGGCCACCTTCATTAGATGATGAGAAGAGTGATATGATATCTGCTTCAAGGAGATTTAGAGCAGAGAACTGGGTCCCTTCTAGAAGCAGTGAACCAACCTACACAGATTTGTTATCGGGTTTTGGGGCCAATGAAGAGTATTCCCATGGGGTTCCTACTACATTTGCTGATCCAATAGTTCAAACTTCCAACTCTGTGAGGAAACATGTACTTGGTCAGGATGGTAAGTCTACCGTTCTTGGCAACCCATGGCCCGTAATATCTTCTGGTCTCTCACTCACATTAGCAGACTCTAATCAGAAGGGTTTTGTTTGTGCTGGTGATATCTCGTTTCAAGCACGGGTGAATAATAGATATGGCAACCTTCTCAATAATCATACCATACTTGAGGGCCATAAATTTGAAAATTCTCCTAGTTGTTGGTTGATGCCTCCGCCATTGCCATCTAATCCTGATAATTCAGTTATTTCAAGAGAGCAAAGGAGAAAAAGCATATTGGCACAGAAGCAGGAGGCTGTGAAACCCAAAGATGGAAATTGCAAGATCTTTGGTATTTCCCTCATCAGGAACCCTATGACACCAGGTCCTGCAGTATCAAATAGAGAAATTATAAACGAGCCAGTTATTCAGATGCACCAGATTCCCCCAGATTATACCTGTGAACAAAAGTCTGAAGAGCAGAAATGCCCGGCATCTGCTGGTAATCGGCTTTCTGCTAATGAACCTGACAAACAACCACAAACCAATGAAATACATGCAAGGGATGTTCAAAGTAAAGGGCAAAGTGTGTCATCTAGGAGTTGTACTAAGGTCCATAAGCAGGGTATTGCACTTGGAAGGTCAGTGGATCTCAGTAAGTTCAACAACTACGATGAACTTACTGCTGATTTGGATCAGTTGTTTGAATTTGGGGGTGAGTTAGCTGCTCCGACAAAGAATTGGCTTATTGTTTACACCGATGATGAAGGTGACATGATGCTTGTTGGAGATGATCCGTGGCAGGAATTTTGTGGCATGGTTCGCAAAATTTATATATATACTAGAGAGGAGGTTCAAAGGATGAATCCAGTGTCCTTAACTATGAAAGCAGAGGAGTCTACATCAGTTGACGTTGAAGATTCAAATGAGGCTAAATGTCAGGCTTTATCTTCAGCAGAAATTTCGTAA 2274 43.84 MPVYDLPHKILCRVANVVLKAEPDTDEVFAQVTLLPEPNQGENAVEKESPPPPSSRFHVQSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVTKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNIPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRISPSEFIVPYEQYMESMKKAYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKKWRGSKWRCLKVRWDETSTIPRPDRVSPWKIEPALTPPALNPMPVPRPKRPRSNMVPTSSESSVLTREGSSRVDPPASGFSRVLQGQDFSILRDNIIESNEGEAAEKSVVWPPSLDDEKSDMISASRRFRAENWVPSRSSEPTYTDLLSGFGANEEYSHGVPTTFADPIVQTSNSVRKHVLGQDGKSTVLGNPWPVISSGLSLTLADSNQKGFVCAGDISFQARVNNRYGNLLNNHTILEGHKFENSPSCWLMPPPLPSNPDNSVISREQRRKSILAQKQEAVKPKDGNCKIFGISLIRNPMTPGPAVSNREIINEPVIQMHQIPPDYTCEQKSEEQKCPASAGNRLSANEPDKQPQTNEIHARDVQSKGQSVSSRSCTKVHKQGIALGRSVDLSKFNNYDELTADLDQLFEFGGELAAPTKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPVSLTMKAEESTSVDVEDSNEAKCQALSSAEIS 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9759644 9763254 + Bpe006304.1 Bpe13g00184 112964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00184 757 MobiDBLite consensus disorder prediction 742 757 - -
Bpe13g00184 757 Gene3D - 59 164 IPR015300 -
Bpe13g00184 757 ProSiteProfiles PB1 domain profile. 635 717 IPR000270 GO:0005515
Bpe13g00184 757 PANTHER AUXIN RESPONSE FACTOR 2 2 742 - -
Bpe13g00184 757 SUPERFAMILY DNA-binding pseudobarrel domain 59 191 IPR015300 -
Bpe13g00184 757 SMART B3_2 62 164 IPR003340 GO:0003677
Bpe13g00184 757 SUPERFAMILY CAD & PB1 domains 631 712 - -
Bpe13g00184 757 Pfam Auxin response factor 188 270 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe13g00184 757 MobiDBLite consensus disorder prediction 35 56 - -
Bpe13g00184 757 Gene3D - 225 295 - -
Bpe13g00184 757 CDD B3_DNA 61 162 IPR003340 GO:0003677
Bpe13g00184 757 MobiDBLite consensus disorder prediction 294 310 - -
Bpe13g00184 757 MobiDBLite consensus disorder prediction 288 339 - -
Bpe13g00184 757 ProSiteProfiles B3 DNA-binding domain profile. 62 164 IPR003340 GO:0003677
Bpe13g00184 757 MobiDBLite consensus disorder prediction 737 757 - -
Bpe13g00184 757 Pfam B3 DNA binding domain 62 163 IPR003340 GO:0003677
Bpe13g00184 757 Pfam AUX/IAA family 682 720 IPR033389 -
Bpe13g00184 757 Pfam AUX/IAA family 615 671 IPR033389 -
Bpe13g00184 757 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 742 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe13g00184 757 Gene3D - 630 724 - -
Bpe13g00184 757 MobiDBLite consensus disorder prediction 312 328 - -
Bpe13g00184 757 MobiDBLite consensus disorder prediction 594 637 - -
Bpe13g00184 757 MobiDBLite consensus disorder prediction 588 637 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00952 Bpe-Chr4:6416456 Bpe13g00184 Bpe-Chr13:9759644 1.39E-26 dispersed
Bpe06g00495 Bpe-Chr6:16189131 Bpe13g00184 Bpe-Chr13:9759644 1.78E-112 dispersed
Bpe13g00184 Bpe-Chr13:9759644 Bpe08g00619 Bpe-Chr8:5031688 7.55E-16 dispersed
Bpe13g00184 Bpe-Chr13:9759644 Bpe05g01038 Bpe-Chr5:22955782 7.15E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22254 PF02362 B3 3.30E-21 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00184 - - vvi:100268072 1076.62