Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00186 ATGGCTCTCTCCGACAACCGTCATCGATCTCTGATCCCCACCTTCCTATACTCGGGTTCGTCATCGTGTCTGTCGTCGCCCAAAAGGCTCTCTGATTTGCATTCTTCCGTGAAAACGACTCGCGGATTGCCTGCATCAACCCCGCTGAGCGATGCGGCACCGAGGAGCTTCGTAATTCCTGCTCCGCGGGAGAAGATTGAGATGTACTCACCCGCTTTCTATGCTGCGTGTACCACCGGTGGAATATTGTGCTGCGGTCTCACGCACATGGCCGTCACTCCTCTCGACCTTGTCAAATGCAATATGCAGATTGATCCAGCAAAATACAAGAACATTACATCTGGTTTTGGAGTTCTGTTCAAGGAGCAGGGAGCCAAAGGATTCTTTAGGGGTTGGGTGCCTACCTTGCTAGGTTACAGTGCTCAGGGTGCTTGTAAATATGGATTTTATGAGTTCTTTAAGAAGTACTACTCCGATATTGTGGGGCCTGAGTATGCAGCCAAGTACAAGACCTTGATATATTTAGCTGGCTCAGCATCTGCTGAAGTTATTGCTGATGTTGCTCTCTGTCCAATGGAGGCTGTGAAAGTTCGCGTCCAAACTCAGCCAGGCTTTGCTCGTGGTTTGGGTGATGGGCTTCCAAAGTTTATTAGGTCTGAAGGTGCTCTCGGATTGTACAAAGGGTTAGTTCCTCTATGGGGTCGTCAAATTCCTTATACAATGGTGAAATTTGCATCTTTTGAGACTATTGTGGAGATGATGTATAAACATGCAATTCCAACGCCCAAAGACCAGTGTAGCAAATCGCTGCAGCTTGGGGTGAGCTTTGCTGGCGGATATGTGGCTGGTGTGCTCTGTGCAATCGTCTCTCACCCTGCTGACAACCTCGTGTCTTTTCTCAACAACGCCAAGGGGGCAACTGCCGGTGATGCAGTAAAGCAGCTGGGATTGTGGGGGCTCTTTACCCGTGGCCTTCCTCTTCGTATTTTAATGATTGGGACCCTTACTGGGGCTCAGTGGGGACTATATGATGCATTCAAAGTTTTTGTTGGGCTGTAA 1059 49.01 MALSDNRHRSLIPTFLYSGSSSCLSSPKRLSDLHSSVKTTRGLPASTPLSDAAPRSFVIPAPREKIEMYSPAFYAACTTGGILCCGLTHMAVTPLDLVKCNMQIDPAKYKNITSGFGVLFKEQGAKGFFRGWVPTLLGYSAQGACKYGFYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLGDGLPKFIRSEGALGLYKGLVPLWGRQIPYTMVKFASFETIVEMMYKHAIPTPKDQCSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATAGDAVKQLGLWGLFTRGLPLRILMIGTLTGAQWGLYDAFKVFVGL 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9797064 9799661 + Bpe006306.1 Bpe13g00186 112966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00186 352 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 352 IPR044677 GO:0005315|GO:1990547
Bpe13g00186 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Bpe13g00186 352 Pfam Mitochondrial carrier protein 76 158 IPR018108 -
Bpe13g00186 352 Pfam Mitochondrial carrier protein 173 257 IPR018108 -
Bpe13g00186 352 PANTHER PHOSPHATE TRANSPORTER 1 352 - -
Bpe13g00186 352 SUPERFAMILY Mitochondrial carrier 75 345 IPR023395 -
Bpe13g00186 352 Gene3D Mitochondrial carrier domain 73 350 IPR023395 -
Bpe13g00186 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
Bpe13g00186 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bpe13g00186 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 349 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00155 Bpe-Chr12:1135908 Bpe13g00186 Bpe-Chr13:9797064 1.46E-100 dispersed
Bpe13g00186 Bpe-Chr13:9797064 Bpe14g01360 Bpe-Chr14:10959499 0 dispersed
Bpe13g00186 Bpe-Chr13:9797064 Bpe02g01298 Bpe-Chr2:16500947 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00186 K15102 - twl:120004074 588.956