Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g00187 | AACACGGCCTTTACCACCTTCCTAACAACCTCTCTAATGGCAGCCTTTTCCTCTCAGCACCTGCACCACCCTTTTCACCTCCTCCCTCCTTCTTTCCCAAACAACCCGACGTCGCCGAAAATGTCTGACACCACCGCAGATGATTTTTCTCAGTTTTACCACCCTCATCAGCCTAGCCCTCTTGGCCATGGCAGAGAGATTCAATTGCCTGATAACGAGAGTTCTTTAGCTTACAAACAAAGCAGCGAGTCCTCCATTGTTGTGGATAAAGTCGAAAGCGGAGAGCAGGTGACCCAGAAGATAAATTCAAAGGAGAAGAAGAGGAAGAAGAGAAATGGTTCAGTTTCCAGTTCTGTTCAGTTCAAGAGCAAAGCGGAAGGAAGAGGAACAAAGCAGAAGAAACAGAAGGATGAGAAGAAAGACGAGAAAGAAGTTGCAGAGGAAGCTCCTCCAACAGGCTATATTCATGTTAGAGCAAGGAGGGGTCAAGCTACCGACAGCCATAGCCTAGCAGAAAGGGTGAGGAGAGAGAAAATTAGTGAGAGAATGAAGATGTTGCAGAGACTTGTTCCAGGCTGTGACAAGGTTACTGGGAAGGCGCTAGTTTTGGATGAAATCATCAATTATGTTCAGTCCCTTCAAAACCAAGTAGAGTTCCTTTCCATGAAACTCGCCTCAGTAAACCCATTATCCTACCAGTTTGAACACGACCTGGATTCATTCATGGCCACAACAGAGGTATAG | 744 | 46.24 | NTAFTTFLTTSLMAAFSSQHLHHPFHLLPPSFPNNPTSPKMSDTTADDFSQFYHPHQPSPLGHGREIQLPDNESSLAYKQSSESSIVVDKVESGEQVTQKINSKEKKRKKRNGSVSSSVQFKSKAEGRGTKQKKQKDEKKDEKEVAEEAPPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLASVNPLSYQFEHDLDSFMATTEV | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9819148 | 9820404 | + | Bpe006307.1 | Bpe13g00187 | 112967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g00187 | 247 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 13 | 243 | IPR024097 | GO:0006355 | |
Bpe13g00187 | 247 | Pfam | Helix-loop-helix DNA-binding domain | 167 | 214 | IPR011598 | GO:0046983 | |
Bpe13g00187 | 247 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 163 | 213 | IPR011598 | GO:0046983 | |
Bpe13g00187 | 247 | SMART | finulus | 169 | 219 | IPR011598 | GO:0046983 | |
Bpe13g00187 | 247 | MobiDBLite | consensus disorder prediction | 73 | 98 | - | - | |
Bpe13g00187 | 247 | MobiDBLite | consensus disorder prediction | 28 | 152 | - | - | |
Bpe13g00187 | 247 | PANTHER | BASIC HELIX LOOP HELIX PROTEIN BHLH8 | 13 | 243 | - | - | |
Bpe13g00187 | 247 | MobiDBLite | consensus disorder prediction | 37 | 52 | - | - | |
Bpe13g00187 | 247 | Gene3D | - | 160 | 232 | IPR036638 | GO:0046983 | |
Bpe13g00187 | 247 | CDD | bHLH_AtBPE_like | 153 | 229 | - | - | |
Bpe13g00187 | 247 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 161 | 230 | IPR036638 | GO:0046983 | |
Bpe13g00187 | 247 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g00187 | Bpe-Chr13:9819148 | Bpe06g00416 | Bpe-Chr6:15556085 | 2.53E-45 | dispersed | |
Bpe13g00187 | Bpe-Chr13:9819148 | Bpe13g00756 | Bpe-Chr13:14089584 | 1.80E-46 | transposed | |
Bpe13g00187 | Bpe-Chr13:9819148 | Bpe10g00365 | Bpe-Chr10:11243759 | 4.55E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22256 | PF00010 | HLH | 6.10E-07 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g00187 | - | - | pvy:116135739 | 239.195 |