Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00189 ATGGGCTGCGTTTTCGGCAGACATGCGGCAGATCGGCGGAGTCTTTCTCGAGCTCGGAACAGTCGCCGGAGTGTCAAAGAGCCTCCGGCTGCTGACAGAGTTATTGATGAGAGGGTTGGGAAGGAGCTGGCACAGATAGAGAAGCCGAAGGATCGAAAAGCTGTGGATTTCGCTGCTGCAGAGCGCCGAAAACTCAGGCTGGATGCGAGCCAGAAAAATGAGCAAGGATGGCCGACGTGGCTGTTGGCGGTCGCCGGAGATGTGATCCAAGGTTGGGCCCCTCGCCGAGCCAATACGTTCGAGAAGCTGGCTAAGATTGGGCAAGGAACTTACAGCAATGTGTACAAAGCAAGAGATCTACTCACAGGAAAAATCGTGGCTTTGAAGAAGGTTAGGTTCGATAATTTAGAGCCAGAAAGTGTAAAGTTCATGGCCAGAGAGATTCTTGTTCTTAGACGACTCGATCATCCAAATGTGGTTAAGCTTGAAGGATTGGTAACTTCCAGAATGTCTTGTAGTCTTTACTTAGTTTTCGAGTATATGGAGCACGATCTCGCCGGCCTCGCTGCTTGCCAAGAGGTCAAATTTTCCGAGCCTCAGGTGAAATGCTATATGAAGCAACTTCTTTCTGGGCTCGAACATTGCCATAGTCGAGGTGTCTTGCATCGCGATATTAAGGGTTCCAATCTTCTGATAAATAACGAAGGAATTCTGAAAATAGCTGATTTTGGGCTGGCTACGTTTTACGATCAAGACCATAAGCAGGCAATGACTAGTCGAGTTGTCACCCTTTGGTATCGCCCCCCCGAACTACTCCTTGGGGCTACCTTCTATGGTGCTGGTGTCGACCTTTGGAGTGCCGGCTGCATCCTGGCAGAGCTGCTGGCTGGGAAACCAATAATGCCCGGAAGAACAGAGGTTGAACAACTTCACAAGATATTTAAGTTATGTGGCTCTCCATCCGATGAATATTGGAAGAAGCATAAACTGCCCAATGCGACTCTGTTTAAGCCACAGCAACCATACAAACGAAGCCTGGCCGAAACTTTCAAGGATTTCCCCTCATCTTCTTTACCTCTCGTCGACGCTCTTCTTTCGACAGATCCTGACAATCGGGGCAGTGCCACAGATGCATTGAATAGCGAATTCTTTAACTCCGAGCCTCAAGCTTGTGAACCTTCGAGTCTACCAAAGTATCCTCCAAGCAAGGAAATGGACGCAAAGTTGAGAGACGAAGAAGCAAAACGGCAAAGGGGTCTTAACGCGAAAGCTAGTGCCGTCGATGGTGTCCGGAAGGTGAGAGTTCGTGATAGAGTTAGCAAGGCCATTCCAGCTCCGGAAGCGAATGCTGAAATTCAAACAAACTTAGACAGGTGGAGATTCGTGACTCAATCGAATGCAAAGAGCAAGAGCGAGAAATTTCCACCACCCCACAAGGATGGAGAGGTTGGATACCCTCGCGAAGCATCGCAGAAAGGGCCAGTGTCGTTTGGTGGGACCGAGTCAAACACCTCTTTTAGCTCTTCCATTTTTAATTCTATTCCGGGATCGGTTAAAAGTGCTGGCTCTTCAGGGAAAACTTCCCGAAAGACAAAAACAAATAAGGATCCTCTTATGGCTCCATCTCGAAAATTCATTCGTGCATTTAAACCATCGATAGGGCTGCCGATGGATTTGTTATTTAAGGCTAAATAA 1695 48.14 MGCVFGRHAADRRSLSRARNSRRSVKEPPAADRVIDERVGKELAQIEKPKDRKAVDFAAAERRKLRLDASQKNEQGWPTWLLAVAGDVIQGWAPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAACQEVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLINNEGILKIADFGLATFYDQDHKQAMTSRVVTLWYRPPELLLGATFYGAGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKHKLPNATLFKPQQPYKRSLAETFKDFPSSSLPLVDALLSTDPDNRGSATDALNSEFFNSEPQACEPSSLPKYPPSKEMDAKLRDEEAKRQRGLNAKASAVDGVRKVRVRDRVSKAIPAPEANAEIQTNLDRWRFVTQSNAKSKSEKFPPPHKDGEVGYPREASQKGPVSFGGTESNTSFSSSIFNSIPGSVKSAGSSGKTSRKTKTNKDPLMAPSRKFIRAFKPSIGLPMDLLFKAK 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9839632 9842780 + Bpe006309.1 Bpe13g00189 112969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00189 564 ProSiteProfiles Protein kinase domain profile. 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00189 564 MobiDBLite consensus disorder prediction 464 501 - -
Bpe13g00189 564 Gene3D Phosphorylase Kinase; domain 1 87 182 - -
Bpe13g00189 564 SUPERFAMILY Protein kinase-like (PK-like) 94 388 IPR011009 -
Bpe13g00189 564 Gene3D Transferase(Phosphotransferase) domain 1 183 424 - -
Bpe13g00189 564 MobiDBLite consensus disorder prediction 1 32 - -
Bpe13g00189 564 MobiDBLite consensus disorder prediction 10 32 - -
Bpe13g00189 564 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Bpe13g00189 564 Pfam Protein kinase domain 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00189 564 SMART serkin_6 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00189 564 MobiDBLite consensus disorder prediction 386 405 - -
Bpe13g00189 564 PANTHER CELL DIVISION PROTEIN KINASE 51 520 - -
Bpe13g00189 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Bpe13g00189 564 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 51 520 - -
Bpe13g00189 564 MobiDBLite consensus disorder prediction 472 486 - -
Bpe13g00189 564 CDD STKc_CDK9_like 100 384 - -
Bpe13g00189 564 MobiDBLite consensus disorder prediction 516 539 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00189 Bpe-Chr13:9839632 Bpe14g01150 Bpe-Chr14:8570446 0 dispersed
Bpe15g00594 Bpe-Chr15:16852546 Bpe13g00189 Bpe-Chr13:9839632 1.28E-176 dispersed
Bpe13g00189 Bpe-Chr13:9839632 Bpe13g00648 Bpe-Chr13:13319298 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63653 PF00069 Pkinase 8.50E-69 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00189 K08819 - zju:107404513 844.343