Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g00200 | TGGCCGAAATCCAGGGAAGCAACCGCAAGAACCATCTCTACGGCCACCCAAATGGAGAGCAACCAGCAAGCTCAGTCCTCTCCGTACCCACCTGCGCAGCCTCCTCCTCCGCCGCCTCCTCAGCCATCTCAATTTCATCACCTTCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAAGAAATCGAACAGGTTAACGAGTTTAAAAATCACCAGTTACCCTTGGCTCGAATCAAGAAGATCATGAAAGCAGATGAGGATGTGCGTATGATCTCCTCAGAAGCCCCGATTCTGTTTGCCAAGGCCTGCGAGCTCTTCATCCTGGAACTCACGATTAGGTCGTGGCTTCACGCGGAGGAAAACAAGAGGAGGACTCTGCAGAAGAATGATATATCGGCAGCGATTACGAGGACTGATATCTTCGATTTTTTGGTGGATATTGTTCCGAGAGATGAGATCAAGGACGAGGCTGGGTTGGAGAGTGTGGTTGGGGCAACTGCTAGTGGCGTACCCTACTATTACCCTCCTTTGGGACAGCCGGCTGGGGCTCCGGCTGGGATGATGATCGGAAGACCAGCAATGGATCCCACCGGGATGTACATGCAGCCTCCGTCTCAAGCGTGGCAGTCAGTATGGCAGGCGCCGCCGGAGGATGGGACGTATGGGAGCGGCGGAAACACTGGGCTTGGCAATCTTAATGGACAAAGAGAGTTCGCCAAAGACAGCGTTCGTCTCGTTAAGAGGTGTCACAAGCCTGATCGCAAAGAATTTACCAAGGTTGCCTTTCGTACGGCGATTGGCTTTGTCGTGATGGGCTTCGTTGGATTCTTCGTCAAGTTGATCTTCATTCCGATCAATAACATCATCGTCGGTTCTGGTTAG | 897 | 52.84 | WPKSREATARTISTATQMESNQQAQSSPYPPAQPPPPPPPQPSQFHHLLQQQQQQLQMFWSYQRQEIEQVNEFKNHQLPLARIKKIMKADEDVRMISSEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDIVPRDEIKDEAGLESVVGATASGVPYYYPPLGQPAGAPAGMMIGRPAMDPTGMYMQPPSQAWQSVWQAPPEDGTYGSGGNTGLGNLNGQREFAKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9976332 | 9985638 | + | Bpe006321.1 | Bpe13g00200 | 112980 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g00200 | 298 | MobiDBLite | consensus disorder prediction | 28 | 44 | - | - | |
Bpe13g00200 | 298 | ProSitePatterns | Protein secE/sec61-gamma signature. | 243 | 271 | IPR001901 | GO:0006605|GO:0006886|GO:0016020 | |
Bpe13g00200 | 298 | MobiDBLite | consensus disorder prediction | 7 | 27 | - | - | |
Bpe13g00200 | 298 | Hamap | Protein translocase subunit SecE [secE]. | 238 | 293 | IPR001901 | GO:0006605|GO:0006886|GO:0016020 | |
Bpe13g00200 | 298 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 77 | 140 | IPR003958 | - | |
Bpe13g00200 | 298 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 20 | 240 | - | - | |
Bpe13g00200 | 298 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Bpe13g00200 | 298 | SUPERFAMILY | Histone-fold | 36 | 149 | IPR009072 | GO:0046982 | |
Bpe13g00200 | 298 | Pfam | SecE/Sec61-gamma subunits of protein translocation complex | 242 | 294 | IPR001901 | GO:0006605|GO:0006886|GO:0016020 | |
Bpe13g00200 | 298 | TIGRFAM | secE_euk_arch: protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic | 240 | 295 | IPR008158 | GO:0008320|GO:0015031|GO:0016020 | |
Bpe13g00200 | 298 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 | 20 | 240 | - | - | |
Bpe13g00200 | 298 | SUPERFAMILY | Preprotein translocase SecE subunit | 237 | 294 | IPR023391 | - | |
Bpe13g00200 | 298 | Gene3D | Histone, subunit A | 43 | 155 | IPR009072 | GO:0046982 | |
Bpe13g00200 | 298 | Gene3D | Preprotein translocase SecE subunit | 238 | 297 | IPR023391 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe13g00200 | Bpe15g00222 | CCT | |
Bpe07g00892 | Bpe13g00200 | CCT | |
Bpe07g00892 | Bpe13g00200 | ECH | |
Bpe13g00200 | Bpe15g00222 | ECH | |
Bpe12g00479 | Bpe13g00200 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01366 | Bpe-Chr11:10229589 | Bpe13g00200 | Bpe-Chr13:9976332 | 9.43E-62 | dispersed | |
Bpe12g00479 | Bpe-Chr12:10559664 | Bpe13g00200 | Bpe-Chr13:9976332 | 1.25E-37 | dispersed | |
Bpe13g00200 | Bpe-Chr13:9976332 | Bpe15g00914 | Bpe-Chr15:18944838 | 3.76E-69 | dispersed | |
Bpe01g00338 | Bpe-Chr1:2125765 | Bpe13g00200 | Bpe-Chr13:9976332 | 8.20E-11 | transposed | |
Bpe13g00200 | Bpe-Chr13:9976332 | Bpe15g00222 | Bpe-Chr15:13346986 | 0 | wgd | |
Bpe13g00200 | Bpe-Chr13:9976332 | Bpe07g00892 | Bpe-Chr7:14974056 | 1.11E-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22258 | PF00808 | CBFD_NFYB_HMF | 1.00E-17 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g00200 | - | - | csv:101213576 | 317.775 |