Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00207 GCTACCTCTTGCATGGATTCCAAGTCTGGTTTTTGTGTTAGGACCCAGATTTTTCACAGTCTCCGACCTCCGGTGCCTCTCCCGCCGATATCCGAACCACTCTCTTTGACCCAGTTCGCATTATCTATTCTCCGGTTGTCCTCTCCGGCCACCAACACCACCGCTCTTATCGATTCCGACTCCGGCCACCACCTATCATACCCTTTATTCCTGCGGCGGGTACAAACTCTCAGCTTCAACCTCCGAGCCCTTACTTCTCTCTCCAAGGGAGATGTGGCTTTCATTCTGTCGCCTTCTTCTCTTCAGATTCCGGTCCTCTACTTTTCTCTGCTATCTCTGGGTGTGGTTGTTTGTCCGGCTAATCCACTGGGTTCCGACTCGGAAGTGGCTCACCAGATTCAACTGAGCAAACCAGTCATTGCTTTCGCGACCTCCTCTACAGCCAAGAAGATTCCCAACCTCAAATTTGGTAGTATTCTGATAGACACGCCGAATTTCTTCTCCATGATGAACGAAACTAAACCAGTCGACGGAAAAAACAGTCTTTCAGATCCGGTTGAGGTGAAACAGTCTGATTCCGCTGCGATTCTTTACTCCTCTGGCACAACCGGACGAGTCAAGGGCGTTTTACTGAGTCACCGAAACTTCATCGCCTTAATCGCTAGATTTTACGGTCGCAACCACCAAGAGGATACTGCTGAAACTCCGGCCAACCCCGTCTCATTGTTCACGTTGCCGCTCTTTCATGTTTTCGGTTTCTTCATGCTCGTACGGGCGATTTCAATGGGGGAGACGCTGGTTCTGATGCAAAGGTTTGATTTTGAGGCATTGCTGAGAGTGGTGGAGAAGTTCAGGGTCAACTACATGCCAGTTTCGCCGCCTCTTGTGGTGGCTCTGGTCAAGTCAGATTTGACGGCGAAATATGATCTTAGCTCGCTTCTGCTACTTGGTTCCGGCGGAGCTCCGCTTGGAAAAGAGATTGTTGACAGATTCAGGGAGAAATTTCCCACCGTGGAAATTTCGCAGGGATACGGTTTGACTGAAAGCACAGGACGGGCGACGAGCTTAGTAGGGCCAGAGGAGTACAAGCATATAAGCTCAGTGGGAAAATTGGCTGAAAATATGGAAGCCAAGACAGTAGACCCTACGACCGGAGCGGCATTGCCTCCTGGCCAGAAAGGCGAGCTGTGGCTCCGAGGCCCCACGATCATGCAAGGCTATATCGGAGACGATGAGGCGACTTCTGCAACCTTGGATCCAGAAGGATGGCTGAAGACCGGTGATCTCTGTTATTTCGATTCGAATGGTTACCTCTACATTGTTGATCGCTTGAAGGAATTGATAAAGTACAAGGCATATCAGGTACCCCCCGCCGAATTGGAGCATTTACTTCAGGCCAATTCCGAGATTGCAGATGCTGCTGTAATTCCGTACCCCGACGAAGATGCCGGAGAAATCCCCATGGCGTATGTAGTACGAAAGCCAGGAAGCAATATCACAGAGGCCCAAGTTGTAGATTTCATTGCAAAACAGGTGGCGCCGTACAAGAAAATACGACGAATAGCTTTCATAAACTCCATCCCGAAATCTCCAGCCGGAAAGATATTGAGGAGGGAGCTTGTCCAACAAGCCCTTTCTAGTGGTTCGTCAAAGCTG 1656 50.0 ATSCMDSKSGFCVRTQIFHSLRPPVPLPPISEPLSLTQFALSILRLSSPATNTTALIDSDSGHHLSYPLFLRRVQTLSFNLRALTSLSKGDVAFILSPSSLQIPVLYFSLLSLGVVVCPANPLGSDSEVAHQIQLSKPVIAFATSSTAKKIPNLKFGSILIDTPNFFSMMNETKPVDGKNSLSDPVEVKQSDSAAILYSSGTTGRVKGVLLSHRNFIALIARFYGRNHQEDTAETPANPVSLFTLPLFHVFGFFMLVRAISMGETLVLMQRFDFEALLRVVEKFRVNYMPVSPPLVVALVKSDLTAKYDLSSLLLLGSGGAPLGKEIVDRFREKFPTVEISQGYGLTESTGRATSLVGPEEYKHISSVGKLAENMEAKTVDPTTGAALPPGQKGELWLRGPTIMQGYIGDDEATSATLDPEGWLKTGDLCYFDSNGYLYIVDRLKELIKYKAYQVPPAELEHLLQANSEIADAAVIPYPDEDAGEIPMAYVVRKPGSNITEAQVVDFIAKQVAPYKKIRRIAFINSIPKSPAGKILRRELVQQALSSGSSKL 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10124954 10127693 + Bpe024930 Bpe13g00207 112987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00207 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 542 - -
Bpe13g00207 552 CDD 4CL 28 540 - -
Bpe13g00207 552 Gene3D - 24 445 IPR042099 -
Bpe13g00207 552 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Bpe13g00207 552 Pfam AMP-binding enzyme 52 450 IPR000873 -
Bpe13g00207 552 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 18 542 - -
Bpe13g00207 552 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Bpe13g00207 552 Gene3D - 446 547 IPR045851 -
Bpe13g00207 552 SUPERFAMILY Acetyl-CoA synthetase-like 51 545 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00171 Bpe-Chr5:5627243 Bpe13g00207 Bpe-Chr13:10124954 2.83E-157 dispersed
Bpe11g00825 Bpe-Chr11:6153213 Bpe13g00207 Bpe-Chr13:10124954 5.16E-132 dispersed
Bpe13g00207 Bpe-Chr13:10124954 Bpe09g00463 Bpe-Chr9:12619951 3.08E-107 dispersed
Bpe13g00206 Bpe-Chr13:10082510 Bpe13g00207 Bpe-Chr13:10124954 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00207 K01904 - csv:101211791 746.503