Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00245 ATGGAAGGAGATGAAATATCGGAAGATGCTGTATCAACTGATACTGCCAAATTACCCGGAACTGTCAACTGGGGTACTGCAACGGTGATTGGAGTTTTTGCAGGATTGTTATATGGAGGTAGCAAAGAGGCTGCAGCATCAGTGAGCAAAGATGCAGAAGTGATGTTGAAGCTCGGGAGTACACCAGATAAACGTGAGCAATATCGGTTGATGAGAGATGCAATGGAAAAGAGGTTTGTTCGAGTTACTCGTGGCTCAATCATTGGTGGAGTGCGGCTTGGGATGTTCACAGCTGCATTTTGCGGCTTACAAAATCTGCTTGCTGAAAACCGCGGAGTCCAAGATGTTTTCAACATTGTCGGGGCTGGTTCTGCCACTGCTGCTACATTTGGTCTAATACTGCCAGGATCACTCAGGTGGCGTGCGAGGAATATGGTGCTGGGTTCCGTCTTAGGAGCAGCAGTTTGCTTCCCAGTTGGATGGCTCCAGTTGAAGCTCGTCGAGAAAGCAAACAATGGGAATGAGGCAGTTACGAGTCGGGATTCGAATCAAACGAGGGAAGGAAGGAGTGGGGTTGGCGCTGCAATTGAGAGGCTTGAAGGAAATTTGAGGAAATAA 618 48.06 MEGDEISEDAVSTDTAKLPGTVNWGTATVIGVFAGLLYGGSKEAAASVSKDAEVMLKLGSTPDKREQYRLMRDAMEKRFVRVTRGSIIGGVRLGMFTAAFCGLQNLLAENRGVQDVFNIVGAGSATAATFGLILPGSLRWRARNMVLGSVLGAAVCFPVGWLQLKLVEKANNGNEAVTSRDSNQTREGRSGVGAAIERLEGNLRK 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10410667 10412742 - Bpe024934 Bpe13g00245 113025

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00245 205 Coils Coil 196 205 - -
Bpe13g00245 205 PANTHER C3ORF1 PROTEIN-RELATED 18 205 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00245 - - - zju:107418382 325.094
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g768 . . . . . Bpe13g00245 Bma06g00215 . . Cmo18g00134 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0147 Cone19ag0144 Lsi02g00380 Csa01g00859 Chy12g01262 Cme12g01687 . . Bda11g01658 . . . . . Sed08g2519 . . . Cma18g00176 . Car18g00166 Cpe09g01020 . Bhi08g01622 Tan05g1997 Cmetu12g1080 . Hepe07g2220 . . Cla01g01306 Cam01g1425 Cec01g1458 Cco01g1465 Clacu01g1371 Cmu01g1278 Cre01g1260 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00245 Bpe_Chr13 FPKM 0.363733 0.0 2.015657 1.291962 0.0 0.0 0.0 0.0 0.512649 0.0