Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00250 ATGGCTTCATCGAGCTTTTACAGTTCACCATGCGCCGCCTGCAAATTTCTCAGAAGAAAATGCTTACCGGGCTGCGTATTCGCACCTTATTTTCCACCAGAAGAACCTCAAAAATTTGCAAATGTTCACAAGATTTTCGGAGCCAGTAATGTAACGAAGCTTCTCAATGAGATTCTTCCTCATCAGAGAGATGATGCAGTTAATTCTCTTGCCTACGAAGCAGAGGCAAGAATAAGAGATCCAGTCTTTGGGTGTACTGGAACCATCTCATTTTTCCAACGACAAGTCCAGAGACTCCAGAAAGAGCTGGACGCTGCAAACGCCGATCTGATTCGATATTCTTGCTTTGGGATTCCACCAAATTTTCAGATACAACGAGAAGTAGTTTTTGTTCCGCAAATGTCTTCTCGCATGAAACAATTTGAGTTCAACAGAATGGCCAGCAGTGAGGAAGGAGGGATAAACGAGAACCCTAATTCTTTCCCAGCCAATTACGCACTTCCTTGGAGTGAGAATCATCTGTGTATATCAATGGAGGAGGAGCAGATGGCCCTGAACAAGAGTCTCTGA 570 44.04 MASSSFYSSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKIFGASNVTKLLNEILPHQRDDAVNSLAYEAEARIRDPVFGCTGTISFFQRQVQRLQKELDAANADLIRYSCFGIPPNFQIQREVVFVPQMSSRMKQFEFNRMASSEEGGINENPNSFPANYALPWSENHLCISMEEEQMALNKSL 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10454390 10454959 - Bpe006370.1 Bpe13g00250 113030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00250 189 Coils Coil 89 109 - -
Bpe13g00250 189 PANTHER ELONGATED PETIOLULE 1 1 176 - -
Bpe13g00250 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bpe13g00250 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bpe13g00250 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 176 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00855 Bpe13g00250 CCT
Bpe07g00855 Bpe13g00250 ECH
Bpe12g00665 Bpe13g00250 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00665 Bpe-Chr12:12311949 Bpe13g00250 Bpe-Chr13:10454390 9.49E-80 dispersed
Bpe13g00250 Bpe-Chr13:10454390 Bpe14g00045 Bpe-Chr14:687932 1.54E-49 dispersed
Bpe13g00250 Bpe-Chr13:10454390 Bpe07g00855 Bpe-Chr7:14679814 2.52E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22262 PF03195 LOB 1.70E-40 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00250 - - tcc:18604002 246.899