Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00259 ATGATTCGGAGAGTGGTGAAAGAGGAATTGGAGCTGATAATGGAAAAGTATTGTGCAGGCATAGAACGGATAATTCGGGATGACAGCAAGGAGAATTTATTTTCTCAGTCAGGAGTTTTACAACTAAAATTTGTGAACTCCCTCTCTCTCCCAATTTATACTGGAACTCGGATAATGGGAGTAGATAATTCCAGCTTAGAAATTGCACTGATCAATGAGCTGACTGGAAAATATGTTGACTTTGAGCCTGAATCCTCAGCAAAGGTCGAAATTTTAGTCCTCGAGGGTGATTTTGATGGTGAGGATCGTGAGAGTTGGACATGTGACACATTTTGTAACAACATTTTGAGGGAGAGAGAAGGAAGGAAACCCCTTCTTGCAGGAGACGTGGTTTTGAATCTTAAAGATGGCGCTGGTTTGATCGGAGAGATTTATTTTACGGATAATTCAAGCTGGACTAGGAGCCGTAAATTCAGGCTCGGGGCGAGAGTTGTGGATAAATGTCCTACAAATAGAATACGAGAAGCAAAGACCGAACCCTTTATTGTCAGAGACCACCGTGGAGAGTGTGAGTACTTTGCTCAAATATGGTGTCGATTAATAAAATCCATATCGATTTTTGAAAAGACAAATAACCCTTGTTCGTTATCATTTATGATAAAACTTAATCTAGTTTTTTGTTGCAGCATACAAAAAACATCATCCTCCAATGTTGTCGGACAAGGTATGGAGATTAGTGAAAATAGGAAAGGATGGAGCGTTTCATAA 768 39.71 MIRRVVKEELELIMEKYCAGIERIIRDDSKENLFSQSGVLQLKFVNSLSLPIYTGTRIMGVDNSSLEIALINELTGKYVDFEPESSAKVEILVLEGDFDGEDRESWTCDTFCNNILREREGRKPLLAGDVVLNLKDGAGLIGEIYFTDNSSWTRSRKFRLGARVVDKCPTNRIREAKTEPFIVRDHRGECEYFAQIWCRLIKSISIFEKTNNPCSLSFMIKLNLVFCCSIQKTSSSNVVGQGMEISENRKGWSVS 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10548626 10549646 - Bpe006382.3 Bpe13g00259 113039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00259 255 PANTHER OS02G0177800 PROTEIN 1 189 IPR012416 GO:0005516
Bpe13g00259 255 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 189 - -
Bpe13g00259 255 Pfam Calmodulin binding protein-like N-terminal domain 40 186 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00259 Bpe15g00529 CCT
Bpe12g00581 Bpe13g00259 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00259 Bpe-Chr13:10548626 Bpe13g01208 Bpe-Chr13:17426729 6.14E-42 dispersed
Bpe12g00581 Bpe-Chr12:11587717 Bpe13g00259 Bpe-Chr13:10548626 2.36E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00259 - - mesc:110617215 231.491