Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00265 ATGGCGAAATCCGGCGAAGTTTGCCGGCGGAGTTTGCCGGAGGAAGGGTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTAGCTGTCGACGATAGCCATGTCGATCGGAAGGTTATCGAGAGGTTGCTTAGGATCTCCTCCTGTAAAGTGACAGCAGTAGAGAGTGGTACGAGAGCTCTTCAGTTTCTGGGGTTGGATGGAGCTAAAACATCTGGAATTGATGGTTTGAAAGTGAATCTGATAATGACAGATTACTCGATGCCTGGGATGACAGGATATGAACTGCTGAAGAAGATCAAGGAATCGTCGGATTTCAGAGAAGTTCCTGTAGTCGTGATGTCGTCTGAGAATATCTTAGCTCGTATTGATAGGTGTTTGGAGGAAGGCGCAGAAGAGTTTATCGTGAAGCCGGTGAAACTCTCCGACGTGAAGCGATTGAAAGATTTTGTGATAACAAAAGGGAAAAGCGACGAAACTAGAGGGCGGAGATCGGAAAAGAGGAAGCGTCGAGAGGAAGAAAATGGGTTCTCCGACAATCCCGCGCGGAATTGTGCTGTTTCCACTCAGCTACGCAAGAAGCCTAGATTGTGCAAGATGAATTGA 603 47.93 MAKSGEVCRRSLPEEGSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVNLIMTDYSMPGMTGYELLKKIKESSDFREVPVVVMSSENILARIDRCLEEGAEEFIVKPVKLSDVKRLKDFVITKGKSDETRGRRSEKRKRREEENGFSDNPARNCAVSTQLRKKPRLCKMN 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10597931 10598989 + Bpe006388.1 Bpe13g00265 113045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00265 200 SUPERFAMILY CheY-like 23 146 IPR011006 -
Bpe13g00265 200 CDD REC_typeA_ARR 26 146 - -
Bpe13g00265 200 MobiDBLite consensus disorder prediction 155 200 - -
Bpe13g00265 200 Pfam Response regulator receiver domain 26 143 IPR001789 GO:0000160
Bpe13g00265 200 Gene3D - 24 197 - -
Bpe13g00265 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 184 IPR045279 GO:0009736
Bpe13g00265 200 SMART REC_2 24 147 IPR001789 GO:0000160
Bpe13g00265 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 18 184 - -
Bpe13g00265 200 MobiDBLite consensus disorder prediction 155 177 - -
Bpe13g00265 200 ProSiteProfiles Response regulatory domain profile. 25 151 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00265 Bpe15g00623 CCT
Bpe13g00265 Bpe15g00623 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01964 Bpe-Chr4:24500677 Bpe13g00265 Bpe-Chr13:10597931 1.46E-48 dispersed
Bpe10g00821 Bpe-Chr10:14251925 Bpe13g00265 Bpe-Chr13:10597931 4.06E-65 dispersed
Bpe11g01741 Bpe-Chr11:13784786 Bpe13g00265 Bpe-Chr13:10597931 2.99E-64 dispersed
Bpe13g00265 Bpe-Chr13:10597931 Bpe15g00976 Bpe-Chr15:19368717 1.01E-43 dispersed
Bpe13g00265 Bpe-Chr13:10597931 Bpe15g00623 Bpe-Chr15:17074805 2.12E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22265 PF00072 Response_reg 3.30E-21 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00265 K14492 - zju:107419317 242.662