Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00279 ATGGATTGGATCGTGGATAGTGGTGCTTCTACCCACGCTGCCTCACGACAACCGTTTGTGAAGAGTTTGTCCAAGTGCCCAAAACACGGTTTACATAATCCCTTCAAAGCACCAGAGCGATATATTTTGTTTGGAGACGTTTCTGCAAAAGCAGCGCACATGCTTTCCCTTCCCAAGGTTGCTGATTTCTTCACGAGGTTAGTACAAAGAGTTTCTCCAAAAAGTTATCAGCAGGCTTTTGGTGAAGTACACGTTACTCAAAAATTTCTAGAGAATTTTTCTGGTGATCAGGTTCGGTTCCTGGCAAGGTCTTTTCAAGTGCCCGGAAATCATGTTGGACAGCAAAGTCACGGTTTTCGATGGCCATATGGTCCTGTTGCAATTATTACTCCCTTCAATTTTCCTCTAGAAATACCTGTTCTTCAATTGATGGGTGCACTTTACATGGGTAACAAGCCCCTTCTAAAAGTTGATAGCAAGGTCAGCATTGTAATGGAGCAAATGATTCGATTGCTTCACTATTGTGGTTTACCTATGGAAGACGTTGATTTGATAAATTCTGATGGGAAGACGATGAATGAGCTGTTGATGGGGGCAAATCCAAGAATGACGCTCTTTACTGGAAGCTCCAGAGTTGCAGAGAAACTGGCCGGTGAGTTAAAAGGTCGGATTAAATTGGAAGATGCTGGATTCGACTGGAAAATTCTGGGACCTGATGTTCAGGAGGAGGATTATGTTTCGTGGGTATGCGATCAGGATGCATACGCCTGTAGTGGTCAGAAGTGCTCTGCACAATCAATTCTCTTCATGCATGAGAACTGGTCAAGAACTTCATTTTTGTCCAAACTAAAAGAACTTGCCGAGAGAAGGAAGTTAGAAGACTTGACGGTTGGCCCTGTCCTTACAATTACAACTGAAGCAATGATGGATCACATCAATAAGCTACTCCAGATTTCTGGTTCAAAGCTTTTGTTTGGAGGGGAACCTTTGGAAAACCACTCCATTCCATCCATATATGGTGCCTTGAAGCCGACTGCAGTTTATGTTCCACTCGAAGAGATAATGAAGGACCAAAACTATGAGCTGGTAACAAGAGAAATTTTCGGACCATTTCAGATTATAACCGACTATAAAGCTGATCAACTTCCATTAGTGTTGGAAGCTTTGGAGAAGATGCACGCCCATTTAACTGCTGCCGTTGTGTCAAATGATCCTCTTTTCTTGCAGGCAATTATCGGAAATTCTGTCAACGGCACAACATATGCTGGACTTCGAGCAAGAACGACTGGAGCTCCACAAAATCATTGGTTTGGACCTGCCGGAGATCCGAGGGGTGCAGGGATTGGAACTCCTGAAGCGATAAAGCTGGTTTGGTCATGCCATAGAGAGATCATTTATGACTTTGGTCCCCTTCCCAAACACTGGAAAATCCCTCCATCTACTTAA 1446 43.64 MDWIVDSGASTHAASRQPFVKSLSKCPKHGLHNPFKAPERYILFGDVSAKAAHMLSLPKVADFFTRLVQRVSPKSYQQAFGEVHVTQKFLENFSGDQVRFLARSFQVPGNHVGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSIVMEQMIRLLHYCGLPMEDVDLINSDGKTMNELLMGANPRMTLFTGSSRVAEKLAGELKGRIKLEDAGFDWKILGPDVQEEDYVSWVCDQDAYACSGQKCSAQSILFMHENWSRTSFLSKLKELAERRKLEDLTVGPVLTITTEAMMDHINKLLQISGSKLLFGGEPLENHSIPSIYGALKPTAVYVPLEEIMKDQNYELVTREIFGPFQIITDYKADQLPLVLEALEKMHAHLTAAVVSNDPLFLQAIIGNSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDFGPLPKHWKIPPST 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10685412 10693286 - Bpe006404.1 Bpe13g00279 113059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00279 481 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 14 480 IPR044638 GO:0004029
Bpe13g00279 481 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 255 266 IPR016160 GO:0016491
Bpe13g00279 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 235 424 IPR016163 GO:0016620
Bpe13g00279 481 Pfam Aldehyde dehydrogenase family 60 420 IPR015590 GO:0016491
Bpe13g00279 481 SUPERFAMILY ALDH-like 59 447 IPR016161 GO:0016491
Bpe13g00279 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 232 IPR016162 GO:0016491
Bpe13g00279 481 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 14 480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00279 Bpe-Chr13:10685412 Bpe13g00492 Bpe-Chr13:12333457 1.19E-12 dispersed
Bpe12g00577 Bpe-Chr12:11564836 Bpe13g00279 Bpe-Chr13:10685412 7.26E-11 wgd
Bpe13g00279 Bpe-Chr13:10685412 Bpe07g00817 Bpe-Chr7:14464866 4.24E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00279 K00294 - qsu:111987570 866.3