Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00280 GAACTTGATAATCTTCAGTTCATCAGAGCTGAAATGGACGAGGTTAAAGAAGAAAATCAAAGGCTAAAGACGTGCATTGACAGAATCAAGAGAGACAGCCAGATTCTTCAAACGGAAATCTTCAGCAAATTGAAAGACGGGATGAAAAGTGCCGAAACGAACAAGATAGATCGAGAAATTAACGAATCGGAGCTCGTTTCGTTGAGTCTCGGATCATCTCCGAAGAACCCTAAAAAACCGAAATCAAAGATGGAAGGAGGGTTAAGTCTCGTACTCGAATCAAACTTATTCGAAGCTTCTTTAAACGCGAGCAAAAGCGATGGAAAGTATTTGGAAGAGCGTACGGAAGTCGAAGCTGCCGAGACATGGCCACCTAGTAAAGCTTCAAGGACGACGAGATCGAGCGAAGAAGAAAATGAAATTTCCATAACAAATCCTCCAAAAAAAGCTAGGGTTTCTGTGAGAGCTAGGTGTGAGACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGGCAGAAAATTGCAAAAGGGAATCCATGCCCTAGAGCTTATTACCGCTGCACCGGAACACCAACTTGTCCGGTTAGAAAACAGGTGCAAAGATGTGCAGAAGACATGAGAATTTTAACAACCACCTACGAAGGAAACCACAACCATCATCTTCCTCCTTCAGCCACTGCCATGGCTTCCACCACTTCTGCTGCTGCTTCAATGCTCCTCTCTGGTTCATCCTCATCTTTCATTTCCAATCCGTACGGACTAAACTTTCATCTCTCTGATCTCACAAACCACAGACCTTCTCTCTCTTCTCCTTCTTCTTCTTCTCACCCAACAATCACCTTAGACCTCACTTCGTCAAACCCTTCTTCTTCATTGAGCTTTTCTCAGAGAAACTCTTCTAGCCTTAACTTTGGATCATGGAGGAACGGGGACTATAGCAATGGCTACCAAACAGGACCCATTGATTACGCAGGGAAGCTTCTGCAAGATAATATCTATCAGACCCTGAAGAACAGTTCTGCCATTGATGCAGCTCCTTCTCAACAAGCTTCGCCAGACGCAGTTTCTGCAGCGACAAAGGCACTAACTGCAGACCCAAACTTTCAATCTGCTTTAAAAGCCGCACTCTCCTTGATTATCGACTCTCATAACAGTAATGGCGTTGGCCGGAGATTTAAGTGGCAAGAGGAGCCGTTGTTTTCTGTAACCAAGCCAAAAGAAGTTGCTTTTTGTTATTGTTTTATATTCTTGCTTACAAAAATTTCAGGAATACACTGTTATTTTTTTACTGCTTTGCAGCTTGCGGTGAAAAAATTTGACCTTAAATATACAAATGAGAAACAAGTATTGGTTTCTGCCAAGGACTCAGAAGTTGTTCCAGCTGTGGATGCTCCTGTGCTTTCTCATACGTCCGTTGATAAAAATGAAAGGAAGTTGGGGGTAAAGAACAATGAAGCTGCAAGTTTATCACACGAGGGATTTGCAGGAAATCAAGTTACAGAAATCCAAGGGACGACATGCGAAGATTCACTTGTTGATAATGAAAAAATTCGCCACGAGAAAGCAGCAATTAAGGTTCAGGCTGCTTTTAGGGGTTATTTGGCTCGTCGGGCACTTCGCGCCCTCAGAGGTATTATAAGGTTGCAGGCACTTATACGAGGGCACTTGGTTAGAAGGCAAGCTGTTGCTACGCTAAGCTGTATGCTGAGAATTGTTAAATTTCAAGCTGTTATTCGGGGGAGGATTGTGAGACATTCTGAAGAAGTGAAAAGAAAATGCATAGTTGTTAAGCCTATGGGACAACCATTAGTTGATCCTGCTGAAGTTAACCTTTCTGCTCGTATGGCAAAGTTTTCGGCGAATATTTTTATTTTCAAGTTGGTTGCTTCATCTCCGAATGCAAAGCCTCTTCAGATCCATTATGATACCGAGGATCAAAATTCAGTCTCTAGCTGGTTGGAACGCTGGTCTAAGATCCAATTCTGGAAACCACTTACCCGACCAAAAAATGTCGCCGAACCCAAATCCCAGAAAAAGCAGGGTAATGGTCAAATTCCCGAAGCACAAACTGTCAGATCAAAGCGCACAAGGAGACTTCCTGGGGCTAACAATGACACTGCCTCTATGCAAACGTCCTCTGAAATTGAGAAACCCAAACGAAATTTCAGGAAAGTTTTGGCCCATCCAGTGGATCAGGTGCAGGAAAATCCTCAAAGTGAGCTCGAAAAAGTTAAGCGGAGCTTAAGGAAGGTTCATAGTTCTATACCGGATAACTCTGTACAAATGGAAGCTGAAAAGCAAAAGGAGACTTCAGAGAAGAGTCCTGGTGCTTCTGGCCGTGAGCTTTTCGAAAGCAATGCGAATAACTTTAATGAAAAAATGAAGAAAGCGACACCAGTAATATCCAATGTGTCTAATGAAGAAATAAAGCATGAGCCACTAGTGATGGAAGAGATTCTCGATGATCAAGTTGTAGCAGATTTAAAGCCTTTGGAAGAGAACAACGATAAAGATCAAATCACTCTCAGAGAAGATGCTCTCAAGACGAAGGTTTCGACAGAGAACCACAGTAACGATGGGAATATTTCAGTCATAAATGGGGAATTGAGCCACAATGAAGATTCGATGAATGGTGAGAATCAGAAATCTAGCAAGAAAGTCTTGACTCCGGCAAAGCTAGCGGAAAATGGGTTGCAAAATAGTCCCACTTTACCGAGTTACATGGCAGCTACTGAATCTGCAAAGGCAAAGCTAAGAGCACAAGGATCACCCAGGTTGGAACAAGATACGGAAAAGAATAATAATATTGTTCGACGCCATTCTCTTCCTTCGTCAACTAATGGCAAAATCAGCTCTCAATCTCCAAGGACCCAGAGACTGGCTCAAACCGGTGGCAGAAGCAGACATAAAAACAAGTCTCATCTTCCTTTAAGGGATGGAAATGGTATGAAAAGTTTGGTCTATTTTATCCCCTGA 2982 42.79 ELDNLQFIRAEMDEVKEENQRLKTCIDRIKRDSQILQTEIFSKLKDGMKSAETNKIDREINESELVSLSLGSSPKNPKKPKSKMEGGLSLVLESNLFEASLNASKSDGKYLEERTEVEAAETWPPSKASRTTRSSEEENEISITNPPKKARVSVRARCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGTPTCPVRKQVQRCAEDMRILTTTYEGNHNHHLPPSATAMASTTSAAASMLLSGSSSSFISNPYGLNFHLSDLTNHRPSLSSPSSSSHPTITLDLTSSNPSSSLSFSQRNSSSLNFGSWRNGDYSNGYQTGPIDYAGKLLQDNIYQTLKNSSAIDAAPSQQASPDAVSAATKALTADPNFQSALKAALSLIIDSHNSNGVGRRFKWQEEPLFSVTKPKEVAFCYCFIFLLTKISGIHCYFFTALQLAVKKFDLKYTNEKQVLVSAKDSEVVPAVDAPVLSHTSVDKNERKLGVKNNEAASLSHEGFAGNQVTEIQGTTCEDSLVDNEKIRHEKAAIKVQAAFRGYLARRALRALRGIIRLQALIRGHLVRRQAVATLSCMLRIVKFQAVIRGRIVRHSEEVKRKCIVVKPMGQPLVDPAEVNLSARMAKFSANIFIFKLVASSPNAKPLQIHYDTEDQNSVSSWLERWSKIQFWKPLTRPKNVAEPKSQKKQGNGQIPEAQTVRSKRTRRLPGANNDTASMQTSSEIEKPKRNFRKVLAHPVDQVQENPQSELEKVKRSLRKVHSSIPDNSVQMEAEKQKETSEKSPGASGRELFESNANNFNEKMKKATPVISNVSNEEIKHEPLVMEEILDDQVVADLKPLEENNDKDQITLREDALKTKVSTENHSNDGNISVINGELSHNEDSMNGENQKSSKKVLTPAKLAENGLQNSPTLPSYMAATESAKAKLRAQGSPRLEQDTEKNNNIVRRHSLPSSTNGKISSQSPRTQRLAQTGGRSRHKNKSHLPLRDGNGMKSLVYFIP 993
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10699745 10707107 + Bpe006405.2 Bpe13g00280 113060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00280 993 ProSiteProfiles IQ motif profile. 521 549 IPR000048 GO:0005515
Bpe13g00280 993 MobiDBLite consensus disorder prediction 669 784 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 855 888 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 115 148 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 740 754 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 924 938 - -
Bpe13g00280 993 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 395 IPR044810 GO:0003700
Bpe13g00280 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 587 IPR027417 -
Bpe13g00280 993 Coils Coil 5 32 - -
Bpe13g00280 993 Pfam IQ calmodulin-binding motif 545 562 IPR000048 GO:0005515
Bpe13g00280 993 Pfam IQ calmodulin-binding motif 522 542 IPR000048 GO:0005515
Bpe13g00280 993 Gene3D - 520 563 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 677 717 - -
Bpe13g00280 993 MobiDBLite consensus disorder prediction 939 964 - -
Bpe13g00280 993 Pfam Protein of unknown function (DUF4005) 887 970 IPR025064 -
Bpe13g00280 993 ProSiteProfiles IQ motif profile. 545 572 IPR000048 GO:0005515
Bpe13g00280 993 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 5 395 - -
Bpe13g00280 993 Gene3D WRKY domain 148 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00280 993 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00280 993 MobiDBLite consensus disorder prediction 920 983 - -
Bpe13g00280 993 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00280 993 MobiDBLite consensus disorder prediction 267 297 - -
Bpe13g00280 993 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00280 993 ProSiteProfiles WRKY domain profile. 158 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00280 993 MobiDBLite consensus disorder prediction 851 888 - -
Bpe13g00280 993 SMART iq_5 543 564 IPR000048 GO:0005515
Bpe13g00280 993 SMART iq_5 520 542 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00791 Bpe13g00280 CCT
Bpe07g00791 Bpe13g00280 ECH
Bpe12g00555 Bpe13g00280 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00280 Bpe-Chr13:10699745 Bpe15g00723 Bpe-Chr15:17745681 4.99E-69 dispersed
Bpe12g00555 Bpe-Chr12:11403395 Bpe13g00280 Bpe-Chr13:10699745 2.87E-78 wgd
Bpe13g00280 Bpe-Chr13:10699745 Bpe15g00610 Bpe-Chr15:16979338 0 wgd
Bpe13g00280 Bpe-Chr13:10699745 Bpe07g00791 Bpe-Chr7:14322658 5.34E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22267 PF13178 DUF4005 9.70E-19 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00280 - - csv:101214198 511.531