Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00301 ATGGGGTGTGTGAGCTCAAAGCAGGCGGTGTTAGTGACGCCTGCGTTGGATCACACCAGTGTCTTTAAGGACAATGCCTCGTTGGGTCTTGGGCAATCGGGTCGGAGCTGTTCGGAACTGGAGAAGGAAGGGAAGTCGAACGTGAAGGCGAGGATCAAAGCTCCGGCTGGGCTGGGGGAGTCAGGTAGCGAGTTAGGTGAGTCAGGGAGAACAAGCTCGAATGGCGGAGGTGGAGAATCTTTGAGCTTCCGACTGGGGAATCTGCACAAATACCTCGAGAGGGAGCAAGTGGCGGCGGGTTGGCCGTCCTGGCTCTGCGCTGTCGCCGGAGAAGCGGTTCACGGTTGGGTTCCTCTTCGTGGTGATGCCTTCGAGAAGTTGGAAAAGATTGGACAAGGAACGTATAGTAGTGTATTTCGAGCCCAAGAGCTTGAAACAGGAAGGATAGTTGCTTTGAAGAAGGTTCGATTTGACAATTTCGAGCCAGAGAGTGTTCGGTTTATGGCTCGGGAGATAACGATTCTCCGCAGGCTCGACCACCCCAACATTGTGAAATTGGAAGGCTTGATTACATCACGATTATCGTGTAGTATCTACCTCATCTTTGAGTACATGGACCATGACATTACTGGCCTACTTTCTTGTCCTGATGTCAAGTTCAGTGAATCACAGATCAAATGTTATATGAAGCAGTTGTTATCTGGGCTCGAGCATTGTCACTCTCGGGGCGTAATGCATAGAGATATTAAAGGATCTAATCTCCTGGTGAACAATGAAGGAGTTTTGAAAGTAGCTGATTTTGGATTGGCCAATTTCCTTGTTTCTGCCGGTCATCGACACCCATTGACTAGTCGTGTTGTCACTTTGTGGTATCGTCCTCCGGAGCTTCTGCTCGGGTCGACAGATTATGGAGCAGCTGTTGATCTTTGGAGTGTTGGCTGTGTTTTTGCTGAACTGCTTCTTGGAAAGCCAATTCTCCAAGGGAGAACAGAGGTGGAACAACTGCACAAAATTTTCAAGCTTTGTGGGTCTCCTCACGAAGAATATTGGAAAAAATCGAAACTTCCGCACTCGACACTGTTCAAACCACAGCAACCTTATGAGAGTTGTCTAAGGGTGACCTTTAAAGATTTTCCTGCAACTACCGTCAACCTTCTCGAAACTCTTCTGTCTGTTGAACCATATAAACGCGGGACTGCCTCGTTTGCTCTTGCATCAGAGTATTTTGCTACAAAGCCATATGCCTGCGATCCATCAAGCATGCCAAAGTACCCACCTAGCAAAGAAATCGACGCAAAAAATCGCGAAGATGCTGGAAGGAAAAGGGTTGGTGGGAGAGCCCATGGTGCAGAAACTCGAAAGCCAACACGAAAATCTGTTGGTATCTGTAAATTGGCACCAGCAGAGGAGTTGGCATTACTAACTCGAGAGCCGGACAAGAAGAACATTATGAATTCACAGAATCTTAAAAATGGAAGAACAATCAAAGTAGGGGAGGAGTCAAAGTCCATGGCTGGTAAACTAGAAGATGCTATTCATGTAAAGAATGCATCTCAAGGAGACATTCCCTTTTCGGGTCCTTTACAAGTTTCCACGTCGAGTGGCTTTGCATGGGCGAAAAGACGAAAAGAAAATTCTTCTACAAGATCCCATAATCGATCCATTTCGAGAGGACACAATATAAACCCCTTGGAGTTTTCTTCCTTTTCACACTCGAGAAATAACATTGACTCAAAGAGGCATGAAAATGGAGATTCTCGTGTAGATTCTAAAGGTCGCGATTCCAATGATATCGCCAAGATTGGTTCGTGGAATCAGTGGGGTAAGTTTGAACGGCCCGATTCGTTTGACGGGTCCGAAGATTACCACTCACAAGAACTATCGTTGCCTCTTTATCTACGAGAGGAGATGAAAACTAAGAGAAGCGCTATGGGATATCAGGATCAAGAGGAAAATGTTGAATTCTCTGGGCCATTAACATCTCAGTCTTATCGGATGGATGAACTTTTAGCTAGACACGAACGACAAATCCGGCAGATAGTTCGAAAAACATGGTTTCAAAGAGGTACGATAGTTGATCGAAGGAAATTAAAATTTTTTTCGAGAAATATTATTTAA 2118 45.66 MGCVSSKQAVLVTPALDHTSVFKDNASLGLGQSGRSCSELEKEGKSNVKARIKAPAGLGESGSELGESGRTSSNGGGGESLSFRLGNLHKYLEREQVAAGWPSWLCAVAGEAVHGWVPLRGDAFEKLEKIGQGTYSSVFRAQELETGRIVALKKVRFDNFEPESVRFMAREITILRRLDHPNIVKLEGLITSRLSCSIYLIFEYMDHDITGLLSCPDVKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFLVSAGHRHPLTSRVVTLWYRPPELLLGSTDYGAAVDLWSVGCVFAELLLGKPILQGRTEVEQLHKIFKLCGSPHEEYWKKSKLPHSTLFKPQQPYESCLRVTFKDFPATTVNLLETLLSVEPYKRGTASFALASEYFATKPYACDPSSMPKYPPSKEIDAKNREDAGRKRVGGRAHGAETRKPTRKSVGICKLAPAEELALLTREPDKKNIMNSQNLKNGRTIKVGEESKSMAGKLEDAIHVKNASQGDIPFSGPLQVSTSSGFAWAKRRKENSSTRSHNRSISRGHNINPLEFSSFSHSRNNIDSKRHENGDSRVDSKGRDSNDIAKIGSWNQWGKFERPDSFDGSEDYHSQELSLPLYLREEMKTKRSAMGYQDQEENVEFSGPLTSQSYRMDELLARHERQIRQIVRKTWFQRGTIVDRRKLKFFSRNII 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10845873 10849914 - Bpe006427.1 Bpe13g00301 113081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00301 705 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00301 705 MobiDBLite consensus disorder prediction 419 456 - -
Bpe13g00301 705 SUPERFAMILY Protein kinase-like (PK-like) 118 415 IPR011009 -
Bpe13g00301 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Bpe13g00301 705 MobiDBLite consensus disorder prediction 551 573 - -
Bpe13g00301 705 Gene3D Transferase(Phosphotransferase) domain 1 207 447 - -
Bpe13g00301 705 MobiDBLite consensus disorder prediction 49 78 - -
Bpe13g00301 705 PANTHER CELL DIVISION PROTEIN KINASE 1 687 - -
Bpe13g00301 705 MobiDBLite consensus disorder prediction 535 597 - -
Bpe13g00301 705 MobiDBLite consensus disorder prediction 428 456 - -
Bpe13g00301 705 Pfam Protein kinase domain 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00301 705 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 687 - -
Bpe13g00301 705 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Bpe13g00301 705 CDD STKc_CDK9_like 124 409 - -
Bpe13g00301 705 MobiDBLite consensus disorder prediction 574 596 - -
Bpe13g00301 705 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Bpe13g00301 705 SMART serkin_6 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01443 Bpe-Chr11:10710340 Bpe13g00301 Bpe-Chr13:10845873 0 dispersed
Bpe13g00301 Bpe-Chr13:10845873 Bpe14g01150 Bpe-Chr14:8570446 0 dispersed
Bpe13g00301 Bpe-Chr13:10845873 Bpe15g00594 Bpe-Chr15:16852546 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63656 PF00069 Pkinase 1.00E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00301 - - csv:101220347 1015.76