Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00370 ATGGGAGACGGCCTTATTCTTCGTGGTACAATGAGGGCTCACACCGATATGGTGACGGCAATTGCCACTCCGATCGACAACGTTGACATGATTGTGACCTCTTCCCGTGACAAATCGATCATCGTTTGGCAGCTAACTAGGGGTGAGAAGACCTACGGTGTTCCGCGCCGTCGTCTGACCGGACATTCTCACTTCGTCGAGGATGTTGTTCTCTCGTCCGATGGTCAATTCGCTCTCTCTGGCTCGTGGGACGGCGAGCTCCGTCTCTGGGACCTTGCTGCTGGTGTCTCTGCTCGGAGATTCGTTGGGCATACTAAGGATGTGCTTTCTGTCGCATTCTCTTATGATAATCGTCAGATTGTTTCGGCCTCTCGGGACCGTACAATTAAGCTGTGGAACACTTTGGGTGAGTGCAAGTATACCATCCAGGAGGGTGATGCTCATTCAGACTGGGTCAGCTGTGTTAGATTCAGCCCTAACACTAACCAGCCGACCATTGTTTCTGCCTCGTGGGACAAGACCGTCAAGGTCTGGAACTTGTCCAATTGCAAGCTGCGGAGCACGTTGACTGGTCACAGTGGATATGTGAACACGGTTGCTGTGTCTCCTGATGGTTCACTTTGCGCAAGTGGAGGGAAGGACGGAGTGATTCTCCTGTGGGATTTGGCTGAGGGAAAGAGACTGTACTCGTTGGAACCGGGCTCTATTATTCATGCACTTTGTTTTAGCCCCAATAGGTATTGGCTTTGCGCGGCAACTGAGAACGGCATTAAGATCTGGGACCTGGAGAGCAAGAGCATTGTTGAGGATTTGAAGGTCGATCTCAAGGCTGAAGCAGAGAAGACTGATGACACACATGCTGCTACTGCCAACAAGAGGAAGGTCATCTACTGCACAAGCCTGAGCTGGAGTGCTGATGGTAGCACATTGTTTAGTGGGTACACCGACGGAGTGATCAGAGTCTGGGGCATCGGCCGGCTGTAG 984 51.93 MGDGLILRGTMRAHTDMVTAIATPIDNVDMIVTSSRDKSIIVWQLTRGEKTYGVPRRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSARRFVGHTKDVLSVAFSYDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHSDWVSCVRFSPNTNQPTIVSASWDKTVKVWNLSNCKLRSTLTGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLEPGSIIHALCFSPNRYWLCAATENGIKIWDLESKSIVEDLKVDLKAEAEKTDDTHAATANKRKVIYCTSLSWSADGSTLFSGYTDGVIRVWGIGRL 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11453677 11455959 + Bpe006496.1 Bpe13g00370 113150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 59 92 - -
Bpe13g00370 327 CDD WD40 7 322 - -
Bpe13g00370 327 ProSitePatterns Trp-Asp (WD) repeats signature. 166 180 IPR019775 -
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 101 133 - -
Bpe13g00370 327 SMART WD40_4 224 261 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 289 323 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 52 91 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 182 221 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 94 133 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 4 44 IPR001680 GO:0005515
Bpe13g00370 327 SMART WD40_4 135 179 IPR001680 GO:0005515
Bpe13g00370 327 Gene3D - 4 327 IPR015943 GO:0005515
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 101 133 IPR001680 GO:0005515
Bpe13g00370 327 ProSitePatterns Trp-Asp (WD) repeats signature. 78 92 IPR019775 -
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 188 IPR001680 GO:0005515
Bpe13g00370 327 SUPERFAMILY WD40 repeat-like 6 322 IPR036322 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 55 91 IPR001680 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 185 221 IPR001680 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 235 261 IPR001680 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 99 133 IPR001680 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 144 179 IPR001680 GO:0005515
Bpe13g00370 327 Pfam WD domain, G-beta repeat 296 322 IPR001680 GO:0005515
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 11 53 IPR001680 GO:0005515
Bpe13g00370 327 PANTHER RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 1 326 IPR045223 GO:0015935|GO:0043022
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 327 IPR001680 GO:0005515
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 182 - -
Bpe13g00370 327 ProSitePatterns Trp-Asp (WD) repeats signature. 208 222 IPR019775 -
Bpe13g00370 327 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Bpe13g00370 327 PRINTS G protein beta WD-40 repeat signature 120 134 IPR020472 -
Bpe13g00370 327 PRINTS G protein beta WD-40 repeat signature 208 222 IPR020472 -
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 230 IPR001680 GO:0005515
Bpe13g00370 327 PANTHER BNAA06G12310D PROTEIN 1 326 - -
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 291 327 - -
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 100 IPR001680 GO:0005515
Bpe13g00370 327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 226 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00370 Bpe15g00520 CCT
Bpe12g00703 Bpe13g00370 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00419 Bpe-Chr11:3192726 Bpe13g00370 Bpe-Chr13:11453677 1.71E-12 dispersed
Bpe13g00370 Bpe-Chr13:11453677 Bpe06g00115 Bpe-Chr6:1804140 8.61E-08 dispersed
Bpe02g00431 Bpe-Chr2:2822589 Bpe13g00370 Bpe-Chr13:11453677 2.35E-06 transposed
Bpe02g00994 Bpe-Chr2:9754380 Bpe13g00370 Bpe-Chr13:11453677 1.78E-19 transposed
Bpe13g00370 Bpe-Chr13:11453677 Bpe15g00520 Bpe-Chr15:16369703 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00370 K14753 - zju:107418716 613.994