Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00378 ATGAAAAACCTTCTTAAAAAGCTGCATATAGTCTCCACTCAATCAGAAGATGCAGGAGGGTCAACTTCATCAAGAACCAACAAGTTTGCTCGTAGTTCATCTCCTGATAGGCTGCACTCAAGGTCCCATCATAATTCTGAGCACAAGCCATTTTCCGGGCTATCAAATTGGCTAAACTCTGTTACTAATAGACATAGGCACAGCTCCCAATCTAGTTCTCATGTCAGAGGAGAGAGAATGGAGCCTTCTGATTCTGGTAGTACTAGTGGTTTAGAGGTCGTTTTGGACACTGCAAAGCGCGATTCTGAATCGAGTAACTCTAGAGATCCTGATATTGATGAGGAATATCAGATTCAGCTGGCTTTGGCGTTGAGTGCTAGAGAAGATCCCGAGGCTGTGCAGATTGAGGCTGTAAAGCAAATTAGTTTGGGCTCTTGTGATCCTGAAAATACTCCGGCTGAAGTTATCGCCTACCGTTACTGGAATTACAATTGTCTTAGCTATGATGATAAGATCATGGATGGCTTCTATGATCTCTATGGAGTCTTAACAGAATCTACCTCAGATAGAATGCCATCTCTGGTCGATCTGCAAGGAACTCCATTGTCTGACAGTGTCACTTGGGAAGCAATCCTGGTCAACAGAGCTGCTGATGCAAACTTACTGAAACTTGAGCAGATGGCCTTGGATATTGTTATCAAGAATCGGTCAAATGATCTTGTTTTTGGGGATAGAAATTTGGTTCGACAGCTTGCTGAATTAGTAGCTAACCAAATGGGAGGACCAGTTGGGGATCCTGAAAAGATGACAAGAAAATGGAAAAACCTTAGTTACACGTTGAAAGCAACTCTTGGTAGCTTGGTTTTGCCTCTTGGTTCTTTAACAGTTGGGTTGGCTCGTCATCGTGCATTGTTATTCAAGCTTTTGGCAGATGGTGTGGACATCCCATGTCGATTGGTGAAAGGACATCAATACACTGGTTTCGATGACGTGGCTATGAACTTTGTAAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCTGGCACACTTATTCCGGCTGATGCAGCTCTACCACGTGTAGCATATGATGAATCTAACTTTCATCCCACTCCATCATTTAGAGATGTTGGTTCTTCAAGCAGTGGGATTGGGAGTTCTTTCGAGGAAAATGCAGATTTTGGTACATTGGATAAGAAATCTGCGTTCAACAATTTTGGTTCTTGGGGAAAGGAAGGTGATGATAAAGTAGAATCCACTTCTTATGCAAATGTACGTGGCCCCAGCAGAAGTGGGGAAGGATTGAAGAAACATTCAGATAATAGTAAAAATTCTTCCAATACAGAGAAGGCCCAAGTGCAAGATTCGCCTGGCCGGTCTTACATGCATACTAGATCACCTTCGTGGACAGAAGGCGTTAGCTCACCTGCTGTGCGTAGAAAGAAAGTTAAAGATGTTTCACAATATATGATTGATGCAGCCATAGAGAATCCGCAATTGGCTCAGAAGCTCTACAATGTGTTGCTTGAAAGTGGGGTTGTTGCTCCTCCCAACTTGTTTACTGAAATTTATAACGATCAGTTAGATATGTCTAATCCCGAAACCAAATCTGATGAAATGAAGAAGCAGATAAGCTCCAAAGAAAATTCAGGCCATAATGATTATAACCCAGGTCAAATTTTGCCTCCCTTGCCACAAGAAAAAGGTAACTTTAGAACGAGTCCTACTGGCAAGCCACAACATGTCAAACATGCAGACTCATCAGGGGCCAACTTTCCTCCTGAGACCAGGGAGCCAATTGGACAACCTATCTTGATACAGTCAGGCACAGCTCCTGGGAAGTACAGCCAAAAGGTTCCAGTTGCGGCAGCTGCAGCTGCTGCAGCGGCTGTTGTTGCATCTTCCATGGTGGTGGCTGCAGCAAAGTCGAGTGCCAACGCCGGTCTTGAACTTCCAGTGGCAGCAGCTGCCACTGCCACTGCCACTGCCGCCGCCGCCGCCGTGGTAGCCACAACGGCTGCTGTGAGTAAGCAGTATGAGCAGGTGGATCTAGATGGTGCTTTTTATGAACCGATGGGTATCTGGGTGAGGGAAAATGATGGGTTGGGAGCCATTTTAGAAGATGAGAGAATATCAGATAGATCAGTTGGGAATGAAAGCACAAAGTCTGATGCTACACTTGATGATGTTGTCGAGTGTGAGATTGCATGGGAGGAAATCACCTTGGGTGAGCGTATCGGACTTGGATCATATGGGGAGGTGTATCGTGGTGACTGGCTCGGAACTGAGGTTGCTGTGAAGAGGTTTCTCGACCAAGATATTTCAGGTGAAATGCTAGAAGAATTCAAAAGTGAGGTGCGGATAATGAAAAGAATTCGTCATCCCAACGTTGTTCTCTTCATGGGAGCTGTTACCCGAGCTCCCAATCTTTCGATCATTACAGAATTTCTTCCTAGAGGTAGTTTGTACAGATTAATTCACAGACATAACAACCAGCTCGATGAACGAAAGCGGTTAAAAATGGCCCTTGATGCGGCTCGAGGGATGAATTATTTGCACAACTGCAGTCCGGTCATCGTACACCGAGATTTAAAATCGCCAAATCTTCTCGTCGATAAAAATTGGGTGGTGAAGGTATGTGATTTTGGCTTATCACGAATGAAGCACAATACATATCTCTCTTCAAAATCAACTGCAGGAACTGCTGAGTGGATGGCTCCGGAGGTGCTAAGAAACGAACGTTCGGACGAAAAATGTGATGTTTTTAGTTTTGGGGTGATATTGTGGGAGTTGTCGACTCTTCGACAGCCATGGGGAGGAATGAACCCGATGCAAGTTGTGGGTGCGGTTGGATTCCAACATCGCCGGCTCGACATTCCGGACGATATGGATCCGGCCATTGCAGACATTATAAGAAAATGTTGGCAAACAGATCCAAAACTGAGACCCACATTTGCTGAGATCATGACTGCTCTAAAGCCATTGCAGAAGCCTATGAACAGCTCTCAATCTCAGAGAGCTGCTCGAGTTGCAGAATCGTCAGTCGGCTAG 3063 44.92 MKNLLKKLHIVSTQSEDAGGSTSSRTNKFARSSSPDRLHSRSHHNSEHKPFSGLSNWLNSVTNRHRHSSQSSSHVRGERMEPSDSGSTSGLEVVLDTAKRDSESSNSRDPDIDEEYQIQLALALSAREDPEAVQIEAVKQISLGSCDPENTPAEVIAYRYWNYNCLSYDDKIMDGFYDLYGVLTESTSDRMPSLVDLQGTPLSDSVTWEAILVNRAADANLLKLEQMALDIVIKNRSNDLVFGDRNLVRQLAELVANQMGGPVGDPEKMTRKWKNLSYTLKATLGSLVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGHQYTGFDDVAMNFVKIDDGREYIVDLMADPGTLIPADAALPRVAYDESNFHPTPSFRDVGSSSSGIGSSFEENADFGTLDKKSAFNNFGSWGKEGDDKVESTSYANVRGPSRSGEGLKKHSDNSKNSSNTEKAQVQDSPGRSYMHTRSPSWTEGVSSPAVRRKKVKDVSQYMIDAAIENPQLAQKLYNVLLESGVVAPPNLFTEIYNDQLDMSNPETKSDEMKKQISSKENSGHNDYNPGQILPPLPQEKGNFRTSPTGKPQHVKHADSSGANFPPETREPIGQPILIQSGTAPGKYSQKVPVAAAAAAAAAVVASSMVVAAAKSSANAGLELPVAAAATATATAAAAAVVATTAAVSKQYEQVDLDGAFYEPMGIWVRENDGLGAILEDERISDRSVGNESTKSDATLDDVVECEIAWEEITLGERIGLGSYGEVYRGDWLGTEVAVKRFLDQDISGEMLEEFKSEVRIMKRIRHPNVVLFMGAVTRAPNLSIITEFLPRGSLYRLIHRHNNQLDERKRLKMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHNTYLSSKSTAGTAEWMAPEVLRNERSDEKCDVFSFGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIIRKCWQTDPKLRPTFAEIMTALKPLQKPMNSSQSQRAARVAESSVG 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11520049 11527396 - Bpe006502.1 Bpe13g00378 113158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 534 604 - -
Bpe13g00378 1020 SMART serkin_6 744 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00378 1020 SUPERFAMILY Protein kinase-like (PK-like) 727 994 IPR011009 -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 1 92 - -
Bpe13g00378 1020 ProSitePatterns Protein kinases ATP-binding region signature. 750 771 IPR017441 GO:0005524
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 8 31 - -
Bpe13g00378 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Bpe13g00378 1020 Gene3D Transferase(Phosphotransferase) domain 1 823 1010 - -
Bpe13g00378 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1011 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 49 68 - -
Bpe13g00378 1020 Pfam Protein tyrosine and serine/threonine kinase 744 996 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 Gene3D Phosphorylase Kinase; domain 1 737 821 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 536 552 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 1000 1020 - -
Bpe13g00378 1020 PRINTS Tyrosine kinase catalytic domain signature 857 875 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 PRINTS Tyrosine kinase catalytic domain signature 967 989 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 PRINTS Tyrosine kinase catalytic domain signature 818 831 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 PRINTS Tyrosine kinase catalytic domain signature 904 914 IPR001245 GO:0004672|GO:0006468
Bpe13g00378 1020 Pfam Ethylene-responsive protein kinase Le-CTR1 153 356 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 32 48 - -
Bpe13g00378 1020 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1011 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 412 484 - -
Bpe13g00378 1020 MobiDBLite consensus disorder prediction 449 477 - -
Bpe13g00378 1020 CDD STKc_MAP3K-like 750 996 - -
Bpe13g00378 1020 ProSiteProfiles Protein kinase domain profile. 744 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01547 Bpe-Chr4:21824958 Bpe13g00378 Bpe-Chr13:11520049 2.58E-38 dispersed
Bpe05g00266 Bpe-Chr5:15618203 Bpe13g00378 Bpe-Chr13:11520049 1.49E-61 dispersed
Bpe13g01207 Bpe-Chr13:17402564 Bpe13g00378 Bpe-Chr13:11520049 6.87E-50 dispersed
Bpe04g01116 Bpe-Chr4:9134316 Bpe13g00378 Bpe-Chr13:11520049 2.00E-104 transposed
Bpe08g01480 Bpe-Chr8:15522659 Bpe13g00378 Bpe-Chr13:11520049 1.71E-93 transposed
Bpe14g00638 Bpe-Chr14:5206061 Bpe13g00378 Bpe-Chr13:11520049 1.15E-06 transposed
Bpe13g00378 Bpe-Chr13:11520049 Bpe15g00509 Bpe-Chr15:16319146 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63659 PF07714 PK_Tyr_Ser-Thr 1.40E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00378 - - pper:18776750 1364.36