Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00390 ATGTCGTCGCTGGATTCAAATTATGACGACGACGACGACGGCTCGTTATCGGAACCCAACGTCTCTGACCAACCGCCGATTCCTCGCGTGGCGGAACCCTCGACTGAACCATCGACCGAATCTGACCTTGAAGAGAAGCCTTGTACTTCATCTCCATTGTCAAAACCTGCTCCTCCGACTCCTTACGAGATCCCTCTCTCGTGGCCATCCGATGGTAAGCTTAGTATCCAATGGATTCTCAATCTAACTGCCTCCTTCGAATGGTCTTCCAGAAATTTGCCTCCCTCCGGTTTTCCCTCTGTTCTTCCGGTTCCTGTGTTTGATAGTCTGGTTCTCGCTGCCTCTAAGATTCTTCACAAGGAACCTAATTGCCTGACAATTCTTGAAGATTTTGTCGAAAGCAGCACCGATGCGGTTGTGGTGGTCGTTGGAGATATTCACGGCCAGTTGCACGATCTCCTCTTTCTCTTTCAAGACGCAGGCTTTCCTTCTGAAAACCGCTTCTTTGTCTTCAATGGCGATTACGTTGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTTATTTTATTGGCTTGGAAGGTTTTTATGCCTCATCAAGTATTTCTTCTTCGAGGAAACCATGAATCAAAGTATTGCACGTCTGTTTACGGGTTTGAAAAGGAAGTGCTGGAAAAATATGGAGACAAAGGTAAGCATGTTTATCGAAAGTGTTTGGGATGCTTTGAAGGGCTGCCTCTGGCCTCCATCATCGCTGGAAATGTTTATACGGCTCACGGAGGGCTTTTCCGCAGTGTAACAGTGCCCACATCAAAGAGATCAAAAGGAAAGAAGAATCGTAAAATAATCGTGAATTCTGAAGCTACCACGATATCTCTTGGTTCTTTGGAAGAACTGCAGAAGGCCAGGCGATCGGTTCTTGATCCTCCATGGGAAGGTTTAAATTTGATTCCTGGCGATGTTCTTTGGTCTGATCCATCAATGAATCCTGGTCTTTCTCCAAATAAAGAGAGAGGCATAGGCTTGTTGTGGGGACCTGATTGCACTGAAGAGTTCTTGAAGAAATTGCAACTAAAGTTGATTATTAGATCTCATGAAGGTCCTGACGCTCGAGAAAAGAGGCCGGGTCTTTCAGGAATGCAGGAAGGCTACACCATAGATCATGTTGTTGAGTCAGGGAAGCTAATTACTTTGTTCAGTGCTCCAGACTACCCTCAGTTTCAGGCTTCCGAGGAAAGGTACAAAAATAAAGGCGCATATATTGTTTTGGAGGCCCCAAATTTTGATGTTCCGGTATTTCATAGTTTTGAAGCAGTCAGTCCTAGGCCGAAGGCGCATCCCTATTATGACTATGTAGATGTAATCGATTCGGACGAAGAGTTGGACTTGACGTCGATGGTAACTGATCCATCGACGGTGACATAA 1422 45.64 MSSLDSNYDDDDDGSLSEPNVSDQPPIPRVAEPSTEPSTESDLEEKPCTSSPLSKPAPPTPYEIPLSWPSDGKLSIQWILNLTASFEWSSRNLPPSGFPSVLPVPVFDSLVLAASKILHKEPNCLTILEDFVESSTDAVVVVVGDIHGQLHDLLFLFQDAGFPSENRFFVFNGDYVDRGAWGLETFFILLAWKVFMPHQVFLLRGNHESKYCTSVYGFEKEVLEKYGDKGKHVYRKCLGCFEGLPLASIIAGNVYTAHGGLFRSVTVPTSKRSKGKKNRKIIVNSEATTISLGSLEELQKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKLQLKLIIRSHEGPDAREKRPGLSGMQEGYTIDHVVESGKLITLFSAPDYPQFQASEERYKNKGAYIVLEAPNFDVPVFHSFEAVSPRPKAHPYYDYVDVIDSDEELDLTSMVTDPSTVT 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11649446 11652875 + Bpe006514.1 Bpe13g00390 113170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00390 473 SUPERFAMILY Metallo-dependent phosphatases 97 449 IPR029052 -
Bpe13g00390 473 Gene3D - 100 462 IPR029052 -
Bpe13g00390 473 SMART pp2a_7 112 439 IPR006186 GO:0016787
Bpe13g00390 473 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 45 465 - -
Bpe13g00390 473 MobiDBLite consensus disorder prediction 1 64 - -
Bpe13g00390 473 ProSitePatterns Serine/threonine specific protein phosphatases signature. 203 208 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 299 326 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 139 166 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 239 265 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 169 196 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 393 409 IPR006186 GO:0016787
Bpe13g00390 473 PRINTS Serine/threonine phosphatase family signature 202 226 IPR006186 GO:0016787
Bpe13g00390 473 CDD MPP_PP7 68 449 IPR041754 -
Bpe13g00390 473 MobiDBLite consensus disorder prediction 1 17 - -
Bpe13g00390 473 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 45 465 - -
Bpe13g00390 473 Pfam Calcineurin-like phosphoesterase 140 367 IPR004843 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00390 Bpe-Chr13:11649446 Bpe15g01109 Bpe-Chr15:20224390 8.32E-45 dispersed
Bpe13g00390 Bpe-Chr13:11649446 Bpe13g00561 Bpe-Chr13:12813311 4.75E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00390 K04460 - csv:116402529 742.265