Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00398 ATGAACTTTTTGAGGGTGTGTTGGAGGCCATCCTCCGACCCTTTTCTCCAAGCCGACTCCTCAAATGGCCGGCAAGATGGATTGCTTTGGTACAAGGACATTGGACAGCACGCAGGCGTTGAATTTTCGATGGCTGTGGTTCAGGCCAACAATTTGTTGGAGGATCAAAGCCAAATTGAGTCAAGTTCGTTGAGCTCACTCGATTTTGGCCTGGACGGCATGTTTGTTGTCATTTATTACAGTCACGGAGGCCCCGTGACATCTCATTTCATCTGCGATCATTTATTCTACCATCTCAAAAGATTTGCATCGGAGCAGCAATCGATGTCAGCAGAGGTGATAAGAAAAGCCTATCAAGCGACAGAGGAGGGGTTTTTGTCATTTGTTGCTAAGCAATGGCCGATGAACTCACAAATAGCAGCTGTTGGATCTTGCTGCTTGGTCGGTGTGATTTGCAGAGGCACCCTCTACATTGCCAACCTCAGAGATTCCCGTGCTGTTCTTGGTAGACTTGTCAGGTCTAATGGGGAGGTTCTTGCCATTCTGCTCTCCGCAGAACATAATGTCGGGATAGAATCTATTCAGCAAGAGATGCAGTCTTTGCACCCTGATGATCACCATATTGTTGTTTCCAACCATGATGTATGGCAAGTAAAGGGTTTGATAAAGGGAATCGCCAGGAGGCTCGTAAAAACTGCACTGCAACAAGCGGCTAAGAAACGAGAGATAAGATATTCTGATCTGAACAAAATCGACCGCGGTAGGCAAATGTCCGTGGTACAGATTGAGCACAGTGAGACCACTGAGAGGGGCAAACCTAAAATTGGTGGTCTAAGCGATCCACGCCTGGGTACCATTGATCGAAAGATGAAATGTGAAACTTGCACTGCAAACATGGCTGAGTGTCCTGGGCACTTTGGGCACCTCGAGCTTGCCAAGCCTATGTTCCATATTGGTTTCATGAAGACAGTTCTGGCTATCATGCGCAGTGTTTGTTTCAATTGCTCAAAGATCCTAGTGGATGAGGAAGATCCCAAGTTCAAGCAAGCTTTGCGTATAAGAAATCCCAAGAACAGGCTTAAAAAAATTTTGGATGCCTGCAAAAACAAAACTAAGTGTGAAGGTGGTGATGAAATTGACGTCCAAGGTCAGGAATTGGAAGAAACAGTGAAGAAGAGTCGAGGGGGCTGCGGTGCTCAGCAGCCAAAGCTCACTATAGATGGTATGAAGATGATTGCAGAATACAAGGCCCAAAGAAAGAAAAATGACGATCAGGAACAGCTTCCTGAACCCGTGGAAAGAAAGCAGACACTAACTGCAGAAAGGGTTCTTAGCGTTTTGAAAAGAATTAGTGATGAGGATTGTCAACTATTGGGCTTGGATCCAAAGTATGCCCGTCCAGATTGGATGATTCTCCAAGTTCTTCCTATCCCTCCTCCTCCAGTTAGACCCTCTGTCATGATGGACGCCACATCCAGGAGTGAGGCAAGACTTCTAATCTTCTCCTCCTTAAAACTCGAGTTCCTGTATATTTTAGATGATCTAACTCATCAGTTAGCCATGATTATAAGACACAACGAGACTCTCAGGAGGCAGGAAAGAAATGGATCACCTGCACATATTATTTCTGAGTTTGCACAATTATTGCAGTTCCATATAGCAACATATTTTGACAACGAACTTCCTGGACTCCCTAGGGCTACACAGAGATCAGGGAGGCCTATAAAGTCTATATGCAGTAGGCTCAAGGCAAAGGAAGGACGAATCAGAGGCAATTTGATGGGAAAACGTGTGGATTTTTCAGCGAGAACAGTTATCACACCTGATCCAAACATTAATATTGATCAACTTGGTGTGCCATGGAGTATTGCTTTGAATCTCACTTATCCGGAGACGGTGACTCCATATAATATTGAAAGACTCAAAGAGCTTGTTGAGTATGGACCTCATCCTCCGCCTGGAAAAACTGGGGCGAAGTATATAATTCGTGACGATGGGCAGAGGCTTGATCTTAGGTATTTAAAGAAGAGTAGTGATCACCATTTGGAGCTTGGATACAAGGTGGAGCGCCATTTGAATGATGGGGATTTTGTTCTATTTAATCGACAACCAAGTCTTCATAAAATGTCAATTATGGGGCACAGGATTAAGATTATGCCATATTCAACCTTCCGACTGAACTTATCGGTCACATCGCCCTACAATGCTGATTTTGATGGCGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACTCGGGCTGAAGTACTGGAACTCATGATGGTTCCTAAGTGTATTGTATCTCCTCAGTCAAACCGGCCTGTTATGGGAATAGTCCAGGATACACTTCTAGGATGCCGTAAGATAACAAAGAGGGATACCTTCATAACTAAGGATGTTTTTATGAATATCTTGATGTGGTGGGAGGATTTTGATGGAAAAGTCCCTGCTCCTGCAATTTTGAAGCCGCAGCCTCTTTGGACTGGCAAACAAGTTTTTAATCTTATTATACCAAAACAAATAAATCTCACTAGGACTGCAGCCTGGCATGCAGAGTCAGAATCTGGATCCATCACGCCTGGAGATACATTTGTCAGGATTGAGAAGGGGGAATTACTTTCAGGAACTCTCTGCAAGAAGACACTGGGGACCTCCACCGGAAGTCTTATACATGTCATTTGGGAGGAGGTTGGTCCAGATGCAGCCCGCAAATTTCTTGGCCATACACAGTGGCTTGTCAATTACTGGCTTCTGCAAAATGGTTTCAGCATTGGTATTGGGGATACTATTGCTGATGCAGCAACCATGGAAAAGATCAATGAAACAATTTCTGGAGCAAAAAATAAAGTGAAAAATCTTATCAAGATGGCTCAAGAAAGGAGTCTAGAGCCTGAGCCGGGACGAACTATGATGGAGTCATTTGAAAATAAAGTGAATCAGGTTTTGAATACGGCTCGTGATGATGCTGGTAGCAGTGCCCAGAAAAGTTTGTCAGAGAGTAACAATCTTAAAGCTATGGTTACCGCTGGTTCTAAAGGCAGTTTTATAAACATTTCACAGATGACTGCTTGTGTGGGGCAGCAGAATGTTGAAGGAAAACGTATACCATTTGGGTTCATTGATAGAACATTACCGCATTTTACAAAAGATGATTATGGCCCTGAAAGTCGTGGCTTTGTTGAGAACTCATACTTGCGAGGACTGACACCACAGGAGTTCTTTTTTCATGCAATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTGAAGACCTCTGAAACTGGGTACATTCAGAGGAGGCTGGTAAAGGCCATGGAAGATATTATGGTTAAATATGATGGAACTGTAAGGAACTCGCTGGGGGATGTTATTCAATTTTTATATGGAGAAGATGGTATGGATGCTGTCTGGATAGAGTCACAAAAGCTTGACTCTTTGAAGATGAAAAAAACAGAGTTTGATAGAGTCTTCAGATATGAGTTTGATGATGAAAATTGGAAACCAAATTACATGTTACCAGAACATATTGAAGATTTGAAAACCATTAGAGAGTTCAGAAACGTTTTTGATGCTGAGGTTCAAAAATTGGAAGCAGACAGGTATCAACTTGGAACTGAAATCACAACCACTGGTGATAACACATGGCCAATGCCTGTCAATCTCAAAAGGCTTATTCAGAATGCACAGAAGACATTCAAGATTGATTTTCGGAGGGCTTCTGACATGCACCCGATGGAAATTGTTGAAGCCATCGATAAACTTCAAGAACGACTGAGGGTTGTTCCTGGTGACGATTTATTGAGTGTGGAGGCTCAAAAGAACGCAACACTGTTCTTTAATATATTGCTCCGTAGTACTTTCTCTAGTAAAAGAGTTTTGGAAGAGTACCGACTTACCCGAGAAGCATTTGAGTGGGTTATTGGGGAGATAGAGTCACGTTTCCTACAGTCATTAGTTGCACCTGGTGAAATGATTGGTTGTGTGGCTGCACAATCCATTGGAGAGCCCGCAACTCAGATGACTTTAAATACCTTTCACTATGCTGGTGTGAGTGCCAAAAATGTCACTCTTGGAGTTCCCAGACTTAGGGAAATCATCAACGTAGCCAAGAGAATCAAAACACCTTCTCTCTCTGTGTATCTGAAACCTGAAGCAAATAAAACTAAGGAAAGGGCTAAAAACGTTCAATGTGCTTTGGAGTACACTACTCTGAGGAGTGTTACTCAAGCTACGGAAGTATGGTATGATCCAGACCCAATGAGCACTATAATCGAGGAAGATGTTGATTTTGTGAAGTCTTATTATGAAATGCCAGATGAGGAAATTGCACCTGAAAAAATATCACCTTGGTTACTTCGGATGGAGTTGAATCGGGAGATGATGGTTGATAAAAAGTTAAGCATGGCCGATATTGCTGAGAAGATCAACCTTGAGTTTGATGATGATTTGACTTGTATATTTAATGATGACAATGCTGAAAAACTGATCCTTAGGATCCGTATCATGAACGATGAAGCTCCAAAAGGGGAATTAAATGATGAATCTGCAGAAGATGATGTTTTTCTAAAGAAGATTGAGAGCAACATGTTAACTGAAATGGCTCTTCGAGGTATACCAGACATCAACAAGGTATTTATTAAAAGTGGGAAAATAAACAAGTTTGATGAAAATGATGGATTTAAACCAGAGAACGAGTGGATGCTTGATACTGAAGGTGTTAATCTGTTAGCGGTTATGTGTCATGAAGATGTTGATTCAAGGAGAACTACAAGCAATCACTTGATTGAAATTATTGAAGTTCTTGGAATTGAGGCTGTCCGCAGATCCCTTCTTGATGAATTGCGTGTTGTTATATCTTTTGACGGATCATACGTAAATTATCGGCATCTTGCCATTCTTTGTGATACTATGACATACCGAGGCCACTTGATGGCCATCACACGTCATGGTATAAATCGAAATGATACTGGACCGATGATGAGATGCTCATTTGAAGAAACTGTGGACATTCTACTTGATGCAGCAGTTTATGCTGAAGCAGATCACCTCAGAGGTGTTACTGAAAATATAATGTTGGGGCAGCTAGCACCTATTGGGACAGGAGACTGTGCCTTGTATCTTAACGATGCGATGTTGAAAAATGCTATTGAGCTCCAGCTACCTAGCTACATGGATGGATTAGATTTTGGCATGACACCTTCCCGTTCACCAGGAACAGGCACTCCATATCATGAGGGTTTAATGTCGCCCAATTATCTGCTGAGCCCTAATCTCCGCTTGTCACCCATTTCAGATGCTCAGTTTTCTCCTTATGTAGGGGCAATGCCCTTCTCTCCGACTTCTTCACCAGGCTACAGCCCATCTTCTCCTGGCTATAGTCCTTCATCACCTGGCTATAGTCCCACCTCTCCTGGCTACAGTCCCACCTCTCCTGGCTACAGTCCCACATCTCCAACTTACAGTCCTAGTTCTCCTGGTTACAGTCCTACAAGTCCTGCATATTCGCCTACAAGTCCCTCTTACTCACCCACCTCACCCAGTTACAGTCCCACCTCTCCCAGTTACAGCCCCACCTCTCCCAGTTACAGCCCCACGTCCCCCAGCTACAGCCCCACTTCCCCCAGCTACAGCCCCACTTCCCCAAGCTATAGCCCAACATCACCTGCTTACAGCCCCACGTCTCCTGCCTACAGTCCCACTTCTCCTGCATACAGTCCTACTTCTCCATCTTACAGTCCTACTTCTCCTTCTTACAGTCCCACCTCCCCGTCCTACAGTCCAACCTCCCCATCCTATAGTCCGACGTCACCATCATACAGCCCTACCTCCCCAGCTTATAGCCCTACCTCTCCTGGGTACAGCCCAACTTCTCCGAGTTATAGTCCAACATTACCAAGTTATAGTCCCACATCTCCAAGTTACAATCCTCAGTCAGCAAAATACAGCCCATCACAGGCTTACTCGCCCAGCAGTCATAGACTGTCTCCTTCAAGTCCATATAGTCCAACATCTCCCACTTACAGCCCGACATCCCCGACATATTCACCAACTTCACCAGAGTACTCTCAATCAAGTCCAACATATAGTCCTAGCAGCCCGTATAACTCCGGAGTGAGCCCAGACTACAGCCCTAGTTCTCCACCATACAGTCCTAGTGCAGGATACTCTCCATCAGCTCCTGGGTATTCACCGTCATCTGCTAGTCAATACACTCCACAGATGAGCGAGAAGGGCGACAGGAGCGAGAAGGACGATTGA 6261 44.03 MNFLRVCWRPSSDPFLQADSSNGRQDGLLWYKDIGQHAGVEFSMAVVQANNLLEDQSQIESSSLSSLDFGLDGMFVVIYYSHGGPVTSHFICDHLFYHLKRFASEQQSMSAEVIRKAYQATEEGFLSFVAKQWPMNSQIAAVGSCCLVGVICRGTLYIANLRDSRAVLGRLVRSNGEVLAILLSAEHNVGIESIQQEMQSLHPDDHHIVVSNHDVWQVKGLIKGIARRLVKTALQQAAKKREIRYSDLNKIDRGRQMSVVQIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRSVCFNCSKILVDEEDPKFKQALRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQELEETVKKSRGGCGAQQPKLTIDGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDATSRSEARLLIFSSLKLEFLYILDDLTHQLAMIIRHNETLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQINLTRTAAWHAESESGSITPGDTFVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISGAKNKVKNLIKMAQERSLEPEPGRTMMESFENKVNQVLNTARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKTEFDRVFRYEFDDENWKPNYMLPEHIEDLKTIREFRNVFDAEVQKLEADRYQLGTEITTTGDNTWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKNATLFFNILLRSTFSSKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEIAPEKISPWLLRMELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENDGFKPENEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIGTGDCALYLNDAMLKNAIELQLPSYMDGLDFGMTPSRSPGTGTPYHEGLMSPNYLLSPNLRLSPISDAQFSPYVGAMPFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTLPSYSPTSPSYNPQSAKYSPSQAYSPSSHRLSPSSPYSPTSPTYSPTSPTYSPTSPEYSQSSPTYSPSSPYNSGVSPDYSPSSPPYSPSAGYSPSAPGYSPSSASQYTPQMSEKGDRSEKDD 2086
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11713551 11731281 - Bpe006523.1 Bpe13g00398 113178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1926 1932 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam Protein phosphatase 2C 74 173 IPR001932 -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1919 1925 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Gene3D - 31 224 IPR036457 -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1912 1918 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 ProSiteProfiles PPM-type phosphatase domain profile. 41 264 IPR001932 -
Bpe13g00398 2086 Gene3D - 1107 1159 - -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1933 1939 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 MobiDBLite consensus disorder prediction 2057 2076 - -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 2001 2007 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 6 1134 1318 IPR007075 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 7 1403 1537 IPR007073 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 3 767 930 IPR007066 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 MobiDBLite consensus disorder prediction 1781 2086 - -
Bpe13g00398 2086 Gene3D RNA polymerase Rpb1, domain 3 771 924 IPR042102 -
Bpe13g00398 2086 PANTHER DNA-DIRECTED RNA POLYMERASE 252 1801 IPR045867 GO:0003899|GO:0006351
Bpe13g00398 2086 CDD RNAP_II_Rpb1_C 1297 1709 - -
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 1 252 593 IPR007080 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 2008 2014 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 2 595 763 IPR000722 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 MobiDBLite consensus disorder prediction 1781 2002 - -
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 4 960 1061 IPR007083 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1863 1869 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 252 1801 - -
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1808 1821 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1794 1807 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1843 1856 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1836 1849 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1941 1954 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1899 1912 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1885 1898 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1822 1835 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1878 1891 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1913 1926 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1815 1828 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1969 1982 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1850 1863 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1927 1940 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1892 1905 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 2016 2029 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1829 1842 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1871 1884 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1779 1793 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1857 1870 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 2002 2015 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Pfam RNA polymerase Rpb1 C-terminal repeat 1864 1877 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Gene3D - 586 770 - -
Bpe13g00398 2086 SMART PP2C_4 31 262 IPR001932 -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1856 1862 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Gene3D - 1048 1106 - -
Bpe13g00398 2086 Gene3D - 1660 1703 - -
Bpe13g00398 2086 SUPERFAMILY PP2C-like 51 207 IPR036457 -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1842 1848 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 SMART rpolaneu7 468 791 IPR006592 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 Gene3D RNA polymerase II, clamp domain 510 558 IPR044893 -
Bpe13g00398 2086 Gene3D RNA polymerase II, clamp domain 233 352 IPR044893 -
Bpe13g00398 2086 PRINTS Proline rich extensin signature 1805 1826 - -
Bpe13g00398 2086 PRINTS Proline rich extensin signature 1777 1789 - -
Bpe13g00398 2086 PRINTS Proline rich extensin signature 1857 1874 - -
Bpe13g00398 2086 PRINTS Proline rich extensin signature 1840 1856 - -
Bpe13g00398 2086 PRINTS Proline rich extensin signature 1875 1900 - -
Bpe13g00398 2086 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 252 1710 - -
Bpe13g00398 2086 MobiDBLite consensus disorder prediction 2008 2044 - -
Bpe13g00398 2086 Gene3D RNA polymerase ii 627 690 - -
Bpe13g00398 2086 Coils Coil 937 957 - -
Bpe13g00398 2086 Gene3D - 929 1047 IPR038120 -
Bpe13g00398 2086 ProSitePatterns Eukaryotic RNA polymerase II heptapeptide repeat. 1849 1855 IPR000684 GO:0003677|GO:0006366
Bpe13g00398 2086 Gene3D - 1403 1538 IPR038593 -
Bpe13g00398 2086 CDD RNAP_II_RPB1_N 255 1114 - -
Bpe13g00398 2086 Pfam RNA polymerase Rpb1, domain 5 1068 1658 IPR007081 GO:0003677|GO:0003899|GO:0006351
Bpe13g00398 2086 CDD PP2Cc 42 204 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00793 Bpe-Chr11:5923764 Bpe13g00398 Bpe-Chr13:11713551 4.96E-18 dispersed
Bpe13g00398 Bpe-Chr13:11713551 Bpe07g00712 Bpe-Chr7:13703790 1.90E-08 dispersed
Bpe15g00974 Bpe-Chr15:19342241 Bpe13g00398 Bpe-Chr13:11713551 4.20E-52 dispersed
Bpe13g00398 Bpe-Chr13:11713551 Bpe05g00296 Bpe-Chr5:16261037 2.01E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00398 K03006 - csv:101220606 2885.13