Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00409 ATGGCTTCTCTTCACCCCCTTCGCCGAAACTCTCTCTATCCTCCAGTTATTCAATCAAATCCCGACGCCCATGCCCAGATGTCATTCGTCTCCCGTTCGGATCTCAATCCGCCTTCTTCTAATCTTTATCCCACTATCGACATGAGAGATCTCACAGAGAATCTATTCCCGGAGAACAGAGATTATCGCGACCCTTATCAGGTTCCTCCTTCGGCTCCTCCTGTAGCGGTGGAGGAGGTTCTTGTTAAAATCCCTGGGGCTATTCTTAATATCATCGACAGGCATTACAGTGTTAAGCTTGCATGTGGCGATTTTTCTATTGTCCGTCTACGACAGTGCGAAAATGTTGTCGCGATGCTCGCTCGCGTCTCTGATGAGATCCAATGGCCATTGATAAAAGATGAGGCGGTAGTAAAACTCGATGAATCGCATTACTTCTTCTCACTTCGCCCTCCCAAAAAAGGAGATTCCGATTCTGAATCGAGCGACGAGGAAGAGGGAAGAAGGAACGATCATGGCTCCGAAAGTTTGCTGAACTACGGGCTGACAATCCCATCAAAAGGGAAAGAAAAATCATTGAAGGAACTGGACCGAATTTTGGACCAATTTAGTAGCTTCACGGTACAGAAGGTGTCGTACAAGGCAAAAAAGGGAGAGGCGTTGGACGTGTCTCTGGCCGAGGAGATGTCTGCGGCGGATCTGAAATCAGGGAAGAAGAAGAAACTGATGGAGGGCAAGTGTGCGGCTTACTGGACCACATTGGCTCCTAATGTCGAGGATTACAGTGGGACTGCAGCAAAGTTGATCGCCGCCGGTTCAGGTCACGTGATCAAGGGAATTTTATGGAGTGGAGATGTGACTGCAGAGAGATTGAAATGGGGGAATGAGGTGATGAAGAAGAAGATGAGCCATAGCTCTGAAGTAGAAATTGACCCTCAAACTCTGAAGAGAATTAAAAGGGTTAAGAGGGTGACAAAAATGACGGAGAAAGTGGCAAACGGAGTCCTTTCGGGAGTTATCAAAGTTTCAGGATACTTAACAAGTTCAGTGGCAAATTCGAAAGTCGGCAAGAAATTTTTTGGCCTCCTCCCTGGTGAAATTCTGCTAGCTTCCTTGGATGGATTCAGTAGAGTTTGTGACGCAGTCGAAGTGGCCGGGAAAAATGTCATGTCTACATCTGCTACTGTGACCACAGATTTCGTGTCCCACAGATACGGGGAAGAAGCTAGCCGTGCAACCAATGAAGGTCTGGACGCTGCTGGCCATGCTATAGGGACTGCATGGGCTGCTTTCAAGATCCGAAAGGCTCTCAATCCGAAAAGTGTCCTCAAATCTTCTAGCCTTGCCAAATCTGCTATCAAAGCTGGGGTGGCCGACATGAAAGCCAAGAAATCCAAAAATGGCAGAAAAGTAGTCGATTGTCGGCTTAAAATTTCTGAATGCTTCTCCCCTCTGACCAATCCAATGGCTACTCCTATGAGGAGGGTGTTTGACAGAATATCGGGTCTCACAAGAACTCTACAGAGGAGCAAAGCTCCTCGAGGAAGAAGACTCTTTCACAGAGATGTTGAGCAGCAAGAATTTCAGTTTGCCAGCACTCATTGTCTCTCATCCTACTACAGTGTCTTTGCAGCTCGCCTTGCTATAATGGTCATGTTGGCGATTTTGATCGGACTGTTAACGCTATTGACGTGGCATTTTACGAAAATCTACACAGCAGAGTCTCTGAATAGCTTAGCATATGGCGTTCGGCACGAGCTTCTGCAACGGCCCATTCTACGAATGTGGAGCATCTTGAACTCGAGTTCTGAAATAACGACAGCCCAAGTTAAACTCTCAGAATACGTGATTCGGAAGTATGACAAGCCTGCAACTCAAGCACAAGAAATCGAGTTGTATGAAGCGATGAAGGATGTGACTTGGGCACTATTTGCGAGTCAAAAAGCTCTAAATGCGATTACGATCAATTACCGAAACGGATTTGTCCAAGCATTTCATAGAGATCATAGGAGCAATAATACATTCTATATTTACTCTGATCTTGCCAACTATTCTATCAGTGCTACTGAATCTTATAACATTAACAGACTGCCATCAGATCGAGGTTGGTCCGATCATCCAATTCATGGTAATGTTTCTGCAATATGGTATCGTGAGCCGCTTGATCCTGTCAGTGGTGAAAAGATTGGAAAAGCAAGGCCAATCCCGCCTGAGGATTTGATTAATATTGCCGGAATTTCACAAGTAGCTGATGGTGTAGCCTCTTGGCATGTGACTGTCAGCAAGTATATGGATTCCCCTTTGCTTTCAGCCGCTTTGCCAGTCTCGGACCCTTTGAACAAAACGATTGTAGCTGTTGTGGGTGTCACCACTGCACTTTCGAGTGTCGGCCAGCTGATGAAAGAACTTGTCGAATTTCATAGTGGTCATATTTATCTGACATCTCAAGAGGGTTATTTGCTAGCCACTTCAGCCAATTCTCCACTTTTGACGAAGACGATCAAGGGGCCGAAGCTTATGATGGCTGTCGATTCCGAGGACAACATGATTCGATTAGGTGCCGAGTGGCTGCAGAAAAATTACGGCAACAAGTTTCCTCCGAATCACGAGGTTCATGCTGAAAATATCAGACTAGGTCGCCAGGAATATTATGTTGACTCGTTTTTCCTCAATTTAAAGCGACTTCCAATTGTAGGAGTCGTTATCGTTCCGAGAAAACACATAATGGGGAAGGTGGATGAGAGAGCTTTCAAAACGTTGGTGATTCTCATATCGGCATCGTTGTGTATCTTAGTCGTCGGATGTGTCTGTATTTTCATTTTGACTAATGGAGTATCCAAGGAAATGGATCTAAGAGCACAATTGATAAGCCATCTGAATGCAAGAAGAAAGGCTGAGGCATCTAACAACTACAAAAGTCAGTTTCTAGCAAACATGAGTCATGAGTTACGAACGCCAATGGCTGCAGTAATTGGATTGTTGGACATTCTTATTTGTGATGATTGCATTACAAATGAACAATATGCGACAGTTTCCCAGATAAGGAAATGCTCCACAGCTCTACTTCGTCTGCTAAATAACATATTGGACTTGAGCAAGGTTGAATCTGGAAAATTAGTGCTGGAAGAAGCCGAGTTTGACCTTGGACGGGAACTTGAAGGGCTTGTCGATATGTTTTCTGTGCAGTGCATTAACCACAACGTTGAGACTGTCTTGGATCTATCGGATGATATGCCGAAACTAGTTCGGGGTGATTCAGGTAGAGTTGTTCAAATATTTGCAAATTTAATCAGCAATTCTATCAAGTTTACAGCTTCTGGTCATATTGTTCTCCGCGGGTGGTGTGAGAGCTCGAGCTCTTCAAATGAAAATGGCAAGTTGGCGTTTGATCAGAAGAAGTCGCGATTTCCTAATCGAATGAAACTGAAGCAGCAAGGACACCACACGAAAAGCAGTTGCAAGAAGGAGAATAAAATGACTCTTTGGTTTGAAGTTGAGGATACCGGCTGTGGAATTGATCCAAGCAAATGGGAGTCTGTCTTTGAAAGCTTTGAGCAAGCCGACCCCTCGACAACCCGAACGCATGGAGGCACAGGTCTTGGACTATGCATCGTTCGAACCCTGGTTCATGAGATGGGTGGAGAAATCAAGGTTGTGAAGAAGAATGGTATGGGAACTTTAATGCAGCTGTACTTAGTTCTAAGTACTCCAGAATCTTCGGAGCAACGCTTTCAACTAGATTATTCGAAGCATAACTTGGTGTTATTGCTTGCGTTGAGAGGTAAAATGAGTCGATTAATCATGTCCCAATGGCTTCGAAAAGTTGGACTTCTCACGGTAGACGCGTCTGAGTGGAACGATCTAACTCTAATTCTTCAGGAGCTGTTTCGAGCCAGGAATTCGAATCATAGCAATGGTTTTGAAACAAATGGGGGTCCTTTCCGAGCTGGATTGTTTGATGTTCAAAACACAAGAAATCGGATGTTCATCACTTTTGTCGATATCGGCCTACTGGACCTGAGTACAGATATCTGGAAGGAACAACTTAACTTCCTCGACAGATATTCGGGAAAAACTAAGTTTGCATGGATGTTGAATCACGATACGTCAAATGCGATAAAGATGGAGCTTCGAAGAAAAGGACACTTGTTGATGATCAACAAACCTCTGTACAAGGCGAAAATGGCTCAGATTCTGGAGGCTGTGATCAAGGAGAAAAATACTGAAGTGTTGAAGAGAAGTTCGAATGGTCTGCAAACTTCGTCCAAGGAAGGTGATTTTTACGAATGCCTCGAGATCGATTCTCATTTTGATAGTGGCAGCTCGGACGATTCCGATGTATCGGAATTGGGCCCCTCCAACTCAGAATCTGCAGTTCGAGTCGGAGAAAAACAGAGGGATGTGATTAAAAAGCCACATGAGAGAGACAACAATTGCCTTGTAGAATTAACTCACGTGTACTCGAAGGAAAGTGATTCCATTTCGACAACTCAGGTACCCGTTTCATCGGAAAATCACGGCCGGCAAGATCAAAGTTTGGCGGAAGAAAAAGGGGAATCCTATTCTAAACCGGAACATTGTCAAAAATCTCTCGCAGGAGTACGGATTCTACTGGCAGAAGATAATCCAGTTCTCCAGAGAGTGACTACTATAATGCTCGAAAAAATGGGAGCTGCAGTTGTGGCCGTGGGAGACGGGTTAGAGGCGGTAGACGCTCTGACGTCAACGCCAGACGGAGAAGAAAGTTGGAGTGGTCGTCCGACCAAACCCGGCAGTGCCTCCCCATATGACTTAATCTTAATGGACTGTCAAATGCCAAAGATGGATGGATACGAAGCAACGAAAGCTATGAGGAAATCGGAAGCCGGAAGTGGTTTTCACATTCCGATAGTGGCTCTGACGGCACATGCAATGTCGTCGGACGAAGCAAAGTGCTTGGAAGTAGGCATGGACGCGTATTTGACGAAGCCGATCAATTACAAGTTGATGGTATCCACCATTCTTTCTCTCACTAAAAGAACACCTTCTCTCTCTCTTCCTAAGGACGATGATACTCACCTTCACAACCCAAGCCTGTGTATTTAA 5085 44.98 MASLHPLRRNSLYPPVIQSNPDAHAQMSFVSRSDLNPPSSNLYPTIDMRDLTENLFPENRDYRDPYQVPPSAPPVAVEEVLVKIPGAILNIIDRHYSVKLACGDFSIVRLRQCENVVAMLARVSDEIQWPLIKDEAVVKLDESHYFFSLRPPKKGDSDSESSDEEEGRRNDHGSESLLNYGLTIPSKGKEKSLKELDRILDQFSSFTVQKVSYKAKKGEALDVSLAEEMSAADLKSGKKKKLMEGKCAAYWTTLAPNVEDYSGTAAKLIAAGSGHVIKGILWSGDVTAERLKWGNEVMKKKMSHSSEVEIDPQTLKRIKRVKRVTKMTEKVANGVLSGVIKVSGYLTSSVANSKVGKKFFGLLPGEILLASLDGFSRVCDAVEVAGKNVMSTSATVTTDFVSHRYGEEASRATNEGLDAAGHAIGTAWAAFKIRKALNPKSVLKSSSLAKSAIKAGVADMKAKKSKNGRKVVDCRLKISECFSPLTNPMATPMRRVFDRISGLTRTLQRSKAPRGRRLFHRDVEQQEFQFASTHCLSSYYSVFAARLAIMVMLAILIGLLTLLTWHFTKIYTAESLNSLAYGVRHELLQRPILRMWSILNSSSEITTAQVKLSEYVIRKYDKPATQAQEIELYEAMKDVTWALFASQKALNAITINYRNGFVQAFHRDHRSNNTFYIYSDLANYSISATESYNINRLPSDRGWSDHPIHGNVSAIWYREPLDPVSGEKIGKARPIPPEDLINIAGISQVADGVASWHVTVSKYMDSPLLSAALPVSDPLNKTIVAVVGVTTALSSVGQLMKELVEFHSGHIYLTSQEGYLLATSANSPLLTKTIKGPKLMMAVDSEDNMIRLGAEWLQKNYGNKFPPNHEVHAENIRLGRQEYYVDSFFLNLKRLPIVGVVIVPRKHIMGKVDERAFKTLVILISASLCILVVGCVCIFILTNGVSKEMDLRAQLISHLNARRKAEASNNYKSQFLANMSHELRTPMAAVIGLLDILICDDCITNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQIFANLISNSIKFTASGHIVLRGWCESSSSSNENGKLAFDQKKSRFPNRMKLKQQGHHTKSSCKKENKMTLWFEVEDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVHEMGGEIKVVKKNGMGTLMQLYLVLSTPESSEQRFQLDYSKHNLVLLLALRGKMSRLIMSQWLRKVGLLTVDASEWNDLTLILQELFRARNSNHSNGFETNGGPFRAGLFDVQNTRNRMFITFVDIGLLDLSTDIWKEQLNFLDRYSGKTKFAWMLNHDTSNAIKMELRRKGHLLMINKPLYKAKMAQILEAVIKEKNTEVLKRSSNGLQTSSKEGDFYECLEIDSHFDSGSSDDSDVSELGPSNSESAVRVGEKQRDVIKKPHERDNNCLVELTHVYSKESDSISTTQVPVSSENHGRQDQSLAEEKGESYSKPEHCQKSLAGVRILLAEDNPVLQRVTTIMLEKMGAAVVAVGDGLEAVDALTSTPDGEESWSGRPTKPGSASPYDLILMDCQMPKMDGYEATKAMRKSEAGSGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINYKLMVSTILSLTKRTPSLSLPKDDDTHLHNPSLCI 1694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11790896 11802085 - Bpe006534.1 Bpe13g00409 113189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 151 181 - -
Bpe13g00409 1694 Pfam His Kinase A (phospho-acceptor) domain 972 1037 IPR003661 GO:0000155|GO:0007165
Bpe13g00409 1694 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1026 1234 IPR036890 -
Bpe13g00409 1694 ProSiteProfiles Response regulatory domain profile. 1535 1671 IPR001789 GO:0000160
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1509 1524 - -
Bpe13g00409 1694 ProSiteProfiles Histidine kinase domain profile. 978 1236 IPR005467 -
Bpe13g00409 1694 Pfam Senescence domain 268 451 IPR009686 -
Bpe13g00409 1694 PANTHER TWO-COMPONENT HISTIDINE KINASE 489 1672 - -
Bpe13g00409 1694 Pfam Response regulator receiver domain 1536 1665 IPR001789 GO:0000160
Bpe13g00409 1694 SUPERFAMILY CheY-like 1533 1673 IPR011006 -
Bpe13g00409 1694 SMART HKATPase_4 1084 1236 IPR003594 -
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1574 1595 - -
Bpe13g00409 1694 PRINTS Bacterial sensor protein C-terminal signature 1179 1189 IPR004358 GO:0016310|GO:0016772
Bpe13g00409 1694 PRINTS Bacterial sensor protein C-terminal signature 1196 1214 IPR004358 GO:0016310|GO:0016772
Bpe13g00409 1694 PRINTS Bacterial sensor protein C-terminal signature 1161 1175 IPR004358 GO:0016310|GO:0016772
Bpe13g00409 1694 Gene3D - 1039 1239 IPR036890 -
Bpe13g00409 1694 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1084 1234 IPR003594 -
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1444 1459 - -
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1491 1508 - -
Bpe13g00409 1694 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 959 1038 IPR036097 GO:0000155|GO:0007165
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1438 1473 - -
Bpe13g00409 1694 Gene3D - 1512 1673 - -
Bpe13g00409 1694 CDD HisKA 972 1033 IPR003661 GO:0000155|GO:0007165
Bpe13g00409 1694 PANTHER OSMOSENSOR HISTIDINE KINASE 489 1672 - -
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 1491 1525 - -
Bpe13g00409 1694 SMART HisKA_10 971 1037 IPR003661 GO:0000155|GO:0007165
Bpe13g00409 1694 SMART REC_2 1534 1667 IPR001789 GO:0000160
Bpe13g00409 1694 Gene3D - 959 1038 - -
Bpe13g00409 1694 MobiDBLite consensus disorder prediction 151 173 - -
Bpe13g00409 1694 CDD REC_hyHK_CKI1_RcsC-like 1536 1667 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00557 Bpe-Chr1:3614054 Bpe13g00409 Bpe-Chr13:11790896 3.76E-56 dispersed
Bpe05g00284 Bpe-Chr5:15997271 Bpe13g00409 Bpe-Chr13:11790896 2.77E-154 dispersed
Bpe13g00409 Bpe-Chr13:11790896 Bpe14g00730 Bpe-Chr14:5663226 2.43E-12 dispersed
Bpe13g00409 Bpe-Chr13:11790896 Bpe15g00478 Bpe-Chr15:16103551 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22279 PF06911 Senescence 4.20E-44 No_clan Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00409 - - cmo:103490686 1773.06