Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00433 ATGTGGCAAACATTGTTCGAAATCGATACAAAATATGTTCCGATCAAACCAGTCGGCAGAGGAGCATATGGAGTGGTGTGTTCTTCCATTAACACCGAAACCAACGAGAAAGTGGCGATCAAGAAGATCAACAACGTGTTTGAAAATCGCATTGATGCGTTGAGAACTCTGAGGGAGTTGAAGCTTCTTCGAAATATTCGACACGAGAATGTGATCGCTCTGAAGGACGTGATGATGCCGATCCATCGATCGAGCTTCAAAGATGTGTATTTGGTTTATGAGCTCATGGATACGGATCTCCACCAGATCATCAAGTCCTCACAGCCACTCTCAAATGATCATTGCAAGTTTTTTGTCTTTCAGTTGCTTCGAGGGCTGAAATATCTTCACTCGGCCAATGTTCTTCACCGTGATTTGAAGCCCGGGAATCTCCTCGTTAATGCCAATTGCGACTTGAAGATTTGCGATTTTGGGCTGGCGAGAACTAACAGAGGGAATGGGCAGTTCATGACTGAATATGTCGTCACCCGTTGGTACCGTGCCCCGGAGCTACTCCTGGCATGTGACAACTACGGAACCTCCATTGATGTGTGGTCTGTTGGTTGTATTTTTGCCGAAATTCTCGGGAGAAAGCCGATCTTTCCCGGCACCGAGTGTCTAAACCAGCTGAAACTCATAATCAACATTCTCGGTAGTCAGCCAGAAGAAAATATAGAGTTTATCGATAATCCAAAGGCGAGGAAGTACATACAATCGCTTCCGTTTTCGAGGGGAATGCACTTTTCGCGGTTATATCCTCACGCAGATCCTCTGGCCTTGGATTTGTTGCAGAGGATGCTGGTTTTCGACCCCACTAAGAGAATTTCGGTGACTGAAGCTCTTAAACATCCTTACATGGCAGGGCTGCATGACCCGAGATGCGACCTGCCTGCTCAGGTACCGATCAATCTTGACATAGACGAGAGGCTGGGAGAACATATGATCAGAGAGATGATGTGGGATGAGATACTTTACTATCATCCCGAGGCTGCTTTTGCGTATTCATAA 1047 46.23 MWQTLFEIDTKYVPIKPVGRGAYGVVCSSINTETNEKVAIKKINNVFENRIDALRTLRELKLLRNIRHENVIALKDVMMPIHRSSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKFFVFQLLRGLKYLHSANVLHRDLKPGNLLVNANCDLKICDFGLARTNRGNGQFMTEYVVTRWYRAPELLLACDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINILGSQPEENIEFIDNPKARKYIQSLPFSRGMHFSRLYPHADPLALDLLQRMLVFDPTKRISVTEALKHPYMAGLHDPRCDLPAQVPINLDIDERLGEHMIREMMWDEILYYHPEAAFAYS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11913713 11914987 - Bpe006556.1 Bpe13g00433 113213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00433 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bpe13g00433 348 SUPERFAMILY Protein kinase-like (PK-like) 4 305 IPR011009 -
Bpe13g00433 348 ProSitePatterns Protein kinases ATP-binding region signature. 18 42 IPR017441 GO:0005524
Bpe13g00433 348 ProSitePatterns MAP kinase signature. 47 150 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bpe13g00433 348 CDD STKc_TEY_MAPK 6 341 - -
Bpe13g00433 348 Gene3D Phosphorylase Kinase; domain 1 2 334 - -
Bpe13g00433 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 345 - -
Bpe13g00433 348 Pfam Protein kinase domain 13 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00433 348 ProSiteProfiles Protein kinase domain profile. 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00433 348 SMART serkin_6 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00433 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 345 - -
Bpe13g00433 348 Gene3D Transferase(Phosphotransferase) domain 1 96 325 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00127 Bpe13g00433 CCT
Bpe10g00127 Bpe13g00433 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01704 Bpe-Chr2:19548284 Bpe13g00433 Bpe-Chr13:11913713 0 dispersed
Bpe13g00433 Bpe-Chr13:11913713 Bpe13g00788 Bpe-Chr13:14290186 0 dispersed
Bpe15g00241 Bpe-Chr15:13690096 Bpe13g00433 Bpe-Chr13:11913713 9.47E-27 dispersed
Bpe13g00433 Bpe-Chr13:11913713 Bpe11g01839 Bpe-Chr11:14808273 2.05E-145 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63664 PF00069 Pkinase 2.50E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00433 K20537 - mnt:21387151 650.588