Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00443 ATGGAAGTGAGAAGGCAAGATAAGGAAATAGGGATTCCTACAAATTTGGGTTATGATTTACAAAAGAGGGAGTCTTCATCCAGACTGACTTCTACACCCTTTGCTCAAACTCAAACAGTGGAAGGAAAAACAAGAGATGGGACAATTCAACAAGAAGAAACCAGTTCCAGCCCACCTCAAACCCTACACCGGAATCATCCTACTTATCAGCTTCATCACCACCACCATTTTCCTCCCGGGCGCCAGTTGAATCCCCTACCACAATTTTCAGGCAATCCCGGAGAAGATCCAGACCCCAAACGGCCAGATCTAGGGTCAGCTCCGACCACACCGGTCGCTGGAAGGTTAAACTCGAAAACACCACCGCAACCTGCAGGTTCGACGGCTTTAACTATATACTCTCCAGTCCGATATCGAGAATGTTTGAAGAACCACGCGGCGAGCATGGGCGGGTACGTTCTCGATGGCTGCGGAGAATTTATGCCCACCGGAGAAGAAACCAGTATAGAAGGCTTGAAATGCGCTGCCTGCGATTGCCACCGTAACTTTCACAGGAAAGAGGTCGACGGCGGACCCTCAGCTCCTTCTTTGGCTAACTGTTACGACCCTTACAGCTCGAACAACAACACTATTCGCCGGGGCGATCAAAGATTAGCTCACCCACTTACCCACCTCAGCCATCAGAGACTCGGTCCACAGGCGCCGATGATGATGGTGTTTGGAAGTTCCGGTGGAGCGGGGGCGGAGTCTTCAAGTGAAGATCTAGCCAGAGAGTATCAAACAAAATCATCGAAGAAGCGGTTTCGGACAAAATTCACACAGGAGCAGAGAGAGAAGATGATGGAATTCGCTGAAAGATTAGGATGGAAGATTCAGAAGCATGATGAGGAAGAGGTGCAGCAATTCTGTACCGAAGCAGGTGTAAAGAGACAGGTTCTCAAGGTATGGATGCATAACAACAAGCCCGCCATTAAAAAACATCAGGTGTAA 990 48.99 MEVRRQDKEIGIPTNLGYDLQKRESSSRLTSTPFAQTQTVEGKTRDGTIQQEETSSSPPQTLHRNHPTYQLHHHHHFPPGRQLNPLPQFSGNPGEDPDPKRPDLGSAPTTPVAGRLNSKTPPQPAGSTALTIYSPVRYRECLKNHAASMGGYVLDGCGEFMPTGEETSIEGLKCAACDCHRNFHRKEVDGGPSAPSLANCYDPYSSNNNTIRRGDQRLAHPLTHLSHQRLGPQAPMMMVFGSSGGAGAESSSEDLAREYQTKSSKKRFRTKFTQEQREKMMEFAERLGWKIQKHDEEEVQQFCTEAGVKRQVLKVWMHNNKPAIKKHQV 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11967088 11968077 - Bpe006566.1 Bpe13g00443 113223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00443 329 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 138 187 IPR006456 -
Bpe13g00443 329 MobiDBLite consensus disorder prediction 19 66 - -
Bpe13g00443 329 MobiDBLite consensus disorder prediction 1 128 - -
Bpe13g00443 329 SUPERFAMILY Homeodomain-like 256 327 IPR009057 -
Bpe13g00443 329 MobiDBLite consensus disorder prediction 111 128 - -
Bpe13g00443 329 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 66 327 - -
Bpe13g00443 329 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 137 188 IPR006456 -
Bpe13g00443 329 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 265 321 IPR006455 -
Bpe13g00443 329 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 66 327 - -
Bpe13g00443 329 Pfam ZF-HD protein dimerisation region 136 188 IPR006456 -
Bpe13g00443 329 Gene3D - 249 325 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00443 Bpe15g00427 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01693 Bpe-Chr2:19485985 Bpe13g00443 Bpe-Chr13:11967088 9.10E-64 dispersed
Bpe05g00095 Bpe-Chr5:1688161 Bpe13g00443 Bpe-Chr13:11967088 3.11E-44 dispersed
Bpe07g00043 Bpe-Chr7:377369 Bpe13g00443 Bpe-Chr13:11967088 9.20E-41 dispersed
Bpe11g01458 Bpe-Chr11:10824731 Bpe13g00443 Bpe-Chr13:11967088 8.69E-49 dispersed
Bpe13g00176 Bpe-Chr13:9670947 Bpe13g00443 Bpe-Chr13:11967088 1.10E-43 dispersed
Bpe15g00243 Bpe-Chr15:13724554 Bpe13g00443 Bpe-Chr13:11967088 1.37E-41 dispersed
Bpe06g00095 Bpe-Chr6:1408916 Bpe13g00443 Bpe-Chr13:11967088 7.36E-59 transposed
Bpe14g00312 Bpe-Chr14:3106882 Bpe13g00443 Bpe-Chr13:11967088 2.38E-34 transposed
Bpe12g00548 Bpe-Chr12:11315665 Bpe13g00443 Bpe-Chr13:11967088 8.72E-20 wgd
Bpe13g00443 Bpe-Chr13:11967088 Bpe14g00177 Bpe-Chr14:2140419 2.26E-49 wgd
Bpe13g00443 Bpe-Chr13:11967088 Bpe15g00427 Bpe-Chr15:15790946 4.94E-149 wgd
Bpe13g00443 Bpe-Chr13:11967088 Bpe07g00782 Bpe-Chr7:14268007 9.10E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22284 PF04770 ZF-HD_dimer 6.90E-30 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00443 - - vvi:100258112 291.197