Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00449 ATGGCGTATTTGTGCACTGACGGTGGAAATCTGATGGCGATTGCTAACCAAGTGATGCAACAGAAACGCAAGCAAGATCAAGAGCAACAACCCCACCAACTCACTGCACTCAGTCCTTTGCTGCTTTGCCCCCTAACCAATTCTCAACAATATCCCATTCAAAGCAATTCGAATTGGAGCTTCGGTCTTTCCGGCTTCGGCTTTCCCGACGCTTTTGAAGGCGTCGGAGGAGGGTTTTCCGGCGAATCAGGGTTTCCCGGCGAAACAGGGTTTCAGTTTTCGAACGTGGAGCACCAGTCTGATCATGGGTCTAGGTTTTGTAAGTTTGAAGGAGGTGCTGCTACTGAGTTTGAGTCAGAAGAGTGGATGCATATCTTAATGGGCGGCAGTGATTCTCCTGACAGCGCTACTCTACCTTCTGGATATGACGTTGGTCTGAACAATGCCGACTGCTGTCTCTTTGGCGCCGATCCGTATCCTTCCTCCGCCACTCACATCGCCGGCGCTTTTTCTCCACCTTCCGATCTCAACCCAGTCATCTTCTCCGACACTCGACTGACTCCGCACCTTCTTCGACTTCAAGATCCTTGTTGGACCCCGAATCTGCAACCGCTTTCACCTCAAGCAGTGGCGAGTGATGTGAAACTAGACGATCCTCCTGTTTATGAGCCTGATATCGAACCTACTCTACCGCTTTTCAATGCCCTTGTGGATTGTGCTAGAGTGTCTGCGTTAGATCCCGAGCTAGCTATGAAAACATTGAGTCGAATCATGTTATCCATATCGGAAAAAGGGGATCCAACTGAAAGAGTAGCCTTTCACTTTTGTGAAGTTTTGCGTAGCAGAATAATTTTTCCGCCGGAAAAGAGCTTGGCCACCACTTCCGCAGAAGAGATGACGTTTCTCTACAAAGTCCTGAACGACGCTTGCCCGTACTCAAAGTTCGCTCATTTAACAGCCAACCAAGCCATACTCGAAGCTTGTGAAAGAGCCAGCAGAATTCACATCGTCGACTTTGGAATCGTACAAGGTATTCAGTGGGCTGCACTTTTACAAGCGCTGGCAACACGCTCAGCCGGAAAACCCAGTCTAATTCGGATATCAGGTATACCGGCGCCAGTTCTGGGGAAATCTCCAGCCGCATCCCTGTTTGCCACCGGAAATAGGCTTGCCCAATTTGCGAAGCTTCACGAACTGCATTTCATGTTCGAACCGATATTGCAGCCGATCGAGGAGCTGCAAATTTCGAGCTTTCGCGTTGGGTCGGAGGAGGTATTGGCCGTCAACTTCATGCTTCAACTGTACAACTTCTTAGACGAGACTCCGGTTCAAGTTCAGAAAGTTCTTCAGCTAGCTAAATCGTTAAACCCAGATATAGTGACGTTGGGCGAGTACGAAGTGAGCTTGAGTCGACCCGGGTTTGTCAGCCGGTTCAACAACGCATTAAAATACTTCTCGGCCGTGTTTGAGTCTTTGGAGCCGAATTTGGCGCGAGACTCACCGGAGAGACTCCGACTGGAGAAATATTTACTGGGTTGCCGAATCGCAGGAGTACTCGGACGAGATGAGCCAGGGGGAAGAAAGAGAGAGCGGATGGAAGAGAAGGGACAGTGGAAAGCTCTGATGGAAAGGGCTGGTTTTGAAGGGGTAGGACAAAGCCATTACGCCGTGAGTCAAGCTAAAATCCTTTTATGGAACTACAATTACAGCACCCAGTACTCAGTAATGGAATCTCAACCTGGGTTTCTCACTTTAGCCTGGAATGAAGTTCCCCTCCTCACTGTTTCTTCATGGCGTTAA 1800 49.28 MAYLCTDGGNLMAIANQVMQQKRKQDQEQQPHQLTALSPLLLCPLTNSQQYPIQSNSNWSFGLSGFGFPDAFEGVGGGFSGESGFPGETGFQFSNVEHQSDHGSRFCKFEGGAATEFESEEWMHILMGGSDSPDSATLPSGYDVGLNNADCCLFGADPYPSSATHIAGAFSPPSDLNPVIFSDTRLTPHLLRLQDPCWTPNLQPLSPQAVASDVKLDDPPVYEPDIEPTLPLFNALVDCARVSALDPELAMKTLSRIMLSISEKGDPTERVAFHFCEVLRSRIIFPPEKSLATTSAEEMTFLYKVLNDACPYSKFAHLTANQAILEACERASRIHIVDFGIVQGIQWAALLQALATRSAGKPSLIRISGIPAPVLGKSPAASLFATGNRLAQFAKLHELHFMFEPILQPIEELQISSFRVGSEEVLAVNFMLQLYNFLDETPVQVQKVLQLAKSLNPDIVTLGEYEVSLSRPGFVSRFNNALKYFSAVFESLEPNLARDSPERLRLEKYLLGCRIAGVLGRDEPGGRKRERMEEKGQWKALMERAGFEGVGQSHYAVSQAKILLWNYNYSTQYSVMESQPGFLTLAWNEVPLLTVSSWR 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12011322 12013121 - Bpe006573.1 Bpe13g00449 113229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00449 599 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 234 598 - -
Bpe13g00449 599 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 234 598 IPR005202 -
Bpe13g00449 599 ProSiteProfiles GRAS family profile. 223 599 IPR005202 -
Bpe13g00449 599 Pfam GRAS domain family 234 599 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00449 Bpe-Chr13:12011322 Bpe11g01481 Bpe-Chr11:11017199 1.81E-56 dispersed
Bpe13g00449 Bpe-Chr13:12011322 Bpe15g01283 Bpe-Chr15:21191189 4.86E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22286 PF03514 GRAS 1.40E-101 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00449 - - zju:107424599 680.633