Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00457 ATGTGTGAATTTAGGACAGCCCTTCCTACAGATATAAATGATTTAGAGCTGCAAATAATGGTGGAAAATGGGATGCGGCATTATTTCGATCTATTCTGCATGAAAGCAAGAGCAGCAAAGACTGATGTTTTCAATGTCATGATCGGCATGTGGAAAACTTCAACTGAAGGACTTTTCTTGTGGATCGGAGGTTCTCGTCCTTCCGAGCTTCTCGAGGTTCTATTCTTCAGTCGCTTGATACTCGCTCCTCAAAGGTCTTCTAAGCAGGCCGAAGAAGCTCTTCTGCAAGGCATGGAAAAACTCCTTCAGGCTTTCATTGACGTAGTAGCTGGCCAACTAGCTGAAGGGAGTCATCCTCTTGGGACGGAAACTGCAAGGGAGAGGCTAGAAGATCTATTTAGCTTCTTTAATCAGGCTGACCATCTACAGCAAGAATCGCTGCAGCAAATGTACAAAATCTTAACAACGCTTCAGTCTGCTCAGTGGTTGCTTGTTTTGGGAGAATATTTCCAACGTCTTCGAGCATTAAGTTCACTTTCATCCAATCTCCTCACGACTCCACCTAGTCTTCCTTGA 576 44.27 MCEFRTALPTDINDLELQIMVENGMRHYFDLFCMKARAAKTDVFNVMIGMWKTSTEGLFLWIGGSRPSELLEVLFFSRLILAPQRSSKQAEEALLQGMEKLLQAFIDVVAGQLAEGSHPLGTETARERLEDLFSFFNQADHLQQESLQQMYKILTTLQSAQWLLVLGEYFQRLRALSSLSSNLLTTPPSLP 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12079658 12080435 - Bpe006582.1 Bpe13g00457 113237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00457 191 PANTHER TRANSCRIPTION FACTOR TGA1 1 183 - -
Bpe13g00457 191 Pfam Seed dormancy control 1 74 IPR025422 GO:0006351|GO:0043565
Bpe13g00457 191 ProSiteProfiles DOG1 domain profile. 1 183 IPR025422 GO:0006351|GO:0043565
Bpe13g00457 191 PANTHER TRANSCRIPTION FACTOR TGA9 1 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00457 Bpe-Chr13:12079658 Bpe14g00350 Bpe-Chr14:3354103 2.77E-43 dispersed
Bpe13g00457 Bpe-Chr13:12079658 Bpe15g00444 Bpe-Chr15:15907624 1.35E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00457 K14431 - csv:116401613 211.46