Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00463 ATGGACGCCCCCTTATTGAAAACGGAACTTTGCCGGAGTGGAAGCAACTGTATTGCGGCGGATAGTGAGCCGGGAGCTAACCGGCGAGTAAGGAGACGTCGAAGAGATTCCTCTGCGATCACAGTCAGGTGTGGTGATCAAACTTTTGATCAGCTGCCTCAGAACCCATCTGAGATTGATCAATCTACCACCATTGCTGCCCCAAAAAGAAGCTCGAGATTTCGCGGAGTCAGCAGACATAGATGGACAGGGAGATACGAAGCCCATTTATGGGATAAAGGGTCTTGGAATCCAACTCAAAAGAAGAAAGGAAAGCAAAGAGCTTACGATGAAGAAGAATCAGCAGCAAGAGCATATGATCTAGCTGCTCTCAAGTACTGGGGAGCATCCACTTTCACCAACTTTCCTATTTCTGATTACGGGAAAGAAATCGAGATTATGGTGAGTGTATCGAAAGAAGAATACTTAGCCACTTTAAGAAGAAGGAGTAGTGGTTTCTCCAGAGGTGTATCCAAGTATAGAGGAGTAGCAAGCAGGCACCATCACAATGGGAGATGGGAGGCAAGAATAGGAAGAGTGTTTGGAAACAAGTATCTGTATCTCGGCACTTACAGTACTCAAGAGGAAGCTGCTCGAGCTTACGATATAGCTGCAATTGAGTACAGAGGAATCAATGCCGTGACCAACTTTGATTTAAGCACATACATAAGATGGCTTAAACCCGAGCCTAATCTGCTTCCGCCATGTTTGAAGTCAGCACCAGCTAAACAGTCTCAGCTCTCCATAGCTTCTTCCTCTTCTATAGCTTCAACAGTCATGGAAGACACCCACTTGTCAATTTTTCCAGAAAAGCAAGAAAGTGTTCATTCCGTAACCAGAAATTCCCGGGCTGCGCCTCCGTCTCCGACGGCTCTAGGACTCCTCCTAAAATCTTCAGTGTTCAGAGATCTGGTGGAGAAGAATTTGAACGGAGGAGTTGCAGAGAATGACACAGAACTTGATACAAAACGAAACAATATTCCTTATTTGTGCTCTTCCAGCGGAGGTTTAGTGTCTGCTCTGAGATCTGGTGAGGAGGATAACAATTTGAGTTCTAAAATGGGCAACTCTCTTTGGATTATGTCTGCTGCATTTCATTCCAACTAA 1146 45.2 MDAPLLKTELCRSGSNCIAADSEPGANRRVRRRRRDSSAITVRCGDQTFDQLPQNPSEIDQSTTIAAPKRSSRFRGVSRHRWTGRYEAHLWDKGSWNPTQKKKGKQRAYDEEESAARAYDLAALKYWGASTFTNFPISDYGKEIEIMVSVSKEEYLATLRRRSSGFSRGVSKYRGVASRHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPEPNLLPPCLKSAPAKQSQLSIASSSSIASTVMEDTHLSIFPEKQESVHSVTRNSRAAPPSPTALGLLLKSSVFRDLVEKNLNGGVAENDTELDTKRNNIPYLCSSSGGLVSALRSGEEDNNLSSKMGNSLWIMSAAFHSN 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12161863 12163889 - Bpe010175.1 Bpe13g00463 113243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00463 381 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 339 - -
Bpe13g00463 381 SUPERFAMILY DNA-binding domain 171 233 IPR016177 GO:0003677
Bpe13g00463 381 Pfam AP2 domain 72 128 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 Pfam AP2 domain 171 223 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 Gene3D AP2/ERF domain 171 233 IPR036955 GO:0003700|GO:0006355
Bpe13g00463 381 Gene3D AP2/ERF domain 72 138 IPR036955 GO:0003700|GO:0006355
Bpe13g00463 381 ProSiteProfiles AP2/ERF domain profile. 73 136 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 PRINTS Ethylene responsive element binding protein signature 213 233 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 SMART rav1_2 172 237 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 SMART rav1_2 73 142 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 SUPERFAMILY DNA-binding domain 72 138 IPR016177 GO:0003677
Bpe13g00463 381 CDD AP2 72 138 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 CDD AP2 171 233 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 ProSiteProfiles AP2/ERF domain profile. 172 231 IPR001471 GO:0003700|GO:0006355
Bpe13g00463 381 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 16 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01411 Bpe-Chr4:20795378 Bpe13g00463 Bpe-Chr13:12161863 4.73E-62 dispersed
Bpe04g01942 Bpe-Chr4:24297951 Bpe13g00463 Bpe-Chr13:12161863 4.73E-86 dispersed
Bpe10g00586 Bpe-Chr10:12813198 Bpe13g00463 Bpe-Chr13:12161863 3.07E-97 dispersed
Bpe13g00463 Bpe-Chr13:12161863 Bpe11g01266 Bpe-Chr11:9463537 1.25E-06 dispersed
Bpe01g00656 Bpe-Chr1:4475781 Bpe13g00463 Bpe-Chr13:12161863 1.78E-97 transposed
Bpe13g00463 Bpe-Chr13:12161863 Bpe14g00190 Bpe-Chr14:2219259 7.04E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22289 PF00847 AP2 5.80E-08 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00463 - - dzi:111317631 382.104