Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00472 ATGAATGGCTGGGATAGGGTCAGGTCGTCGAGATCGGGATTAGGAAGTGGTAATGCTTCTTTGAATGAAAGGGTTCCTTCGTCTCGGACGGTTCGACTTGGCCGAGTCCAGCCTCAGGCCCCTGGTCATCGGACCATATACTGCAATGATCGCGAGGCTAATCTCGCGGTTAAATTCAAGGGGAATTCAGTTTCAACGACAAAGTACAACTTTTTTACTTTTATACCGAAAGGCCTCTTCGAACAGTTCAGGCGGGTGGCTAACCTCTACTTTCTTACAATCTCAATTTTATCTACAACGCCAATAAGTCCTGTAAGCCCAATAACAAACGTGGTCCCCCTTAGTTTGGTTTTACTTGTCTCTCTCATCAAAGAAGCATTTGAGGACTGGAAGCGATTCCAGAATGACATGTCAATAAATAATAATCTGGTGGATGTGTTGCAAGATGAAAAGTGGGAAAGCATTGCGTGGAAGAAGCTGCAGGTTGGAGACATTATCAGGATTAAGCAAGATGGTTTTTTTCCTGCTGATTTGCTTTTTCTTGCTGGTTCAAACGCAGATGGCATCTGCTACATAGAGACTGCTAATTTAGATGGTGAGACAAATTTGAAGATCAGGAAGGCATTGGAAAAGACTTGGGATTACTTGACTCCTGATAAAGCATCTGAATTCAAAGGTTGTGAGATACAATGTGAGCAGCCTAATAATTCATTGTACACTTTCACTGGGAATCTTATTTTTCAGAAACAAACTTTACCTCTTAGCCCAAACCAGCTTTTATTGCGAGGTTGCAGTTTAAGGAACACTGAATACATTGTTGGGGCTGTTATTTTTACAGGCCATGAGACGAAGGTTATGATGAATGCAATGAATGTTCCTTCTAAACGAAGTACTTTGGAGAGGAAACTCGACAAACTTATTCTAGCACTTTTCGGTACTCTGTTTTTCATGTGTCTGATTGGGGCCATTGGCAGTGGTATATTCATAGATCGCAAGTACTATTACTTAAATCTTGATAAAGGTCGAGAAAATCAATTCAACCCTAACAACCGTTTTGTGGTTGCTATTCTAACTATGTTTACCCTGATTACTCTATACTCAACTATAATTCCCATTTCACTTTATGTTTCTATTGAGATGGTCAAATTCATTCAGTCAACTCAATTTATCAACAAGGACTTGAATATGTACCATGCTGAAAGCAACACCTCTGCACTGGCTAGGACTTCCAATTTAAACGAGGAACTTGGACAGGTGGAATACATATTTTCTGATAAAACTGGAACTCTAACAAGAAACTTAATGGAGTTTTTCAAGTGTTCAATTGGAGGAGAAGTCTATGGTACTGGGGTCACTGAAATAGAAAGAGGAATTGCCCAGCGAAATGGCATGAAAATTGACGAAATAAAATTCTGGCATAAAGATGCGTTAGTGACCATTTTTAAACAACAGGGACCGAAATCAGCCAATGCAGTTCTTGAGAAAGGCTTTAATTTTGATGACGGTCGAATAATGCGTGGAGCATGGAGAAATGAGCCTAATCCAGATCTATGCAAGGAATTTTTCAGATGCCTTGCTATATGTCATACCGTGCTTCCTGAGGGTGATGATTCCCCAGAAAAGATCACATATCAAGCAGCTTCACCAGATGAAGCTGCTTTGGTAACTGCGGCAAAAAACTTTGGCTTCTTCTTTTATAGGCGCACACCTACTATGATTTATGTTCGCGAAGCTCATGTTGAGAAGATGGGTAAAGTCCAAGATGTGGCTTATGAGATTCTCAATGTCCTTGAGTTCAATAGTACAAGGAAGCGGCAGTCAGTTGTATGCCGATATCCAGATGGCAGGCTTGTCTTGTATTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCAAGTGGAAATGACGACTTAAAGAAAGTATCTAGGGAACGCCTAGAACAATTTGGTTCTTCTGGGTTGCGAACTCTTTGCCTTGCTTATAAGAATTTGAGTCCTGATATGTATGAAAGCTGGAATGAAAAATTTATCCAGGCCAAATCGTCTCTGCGAGATCGTGAAAAGAAGTTGGACGAGGTGGCAGAACTCATAGAAAAGGATCTTAATTTGATTGGTTGTACGGCCATTGAAGACAAGCTTCAAGAAGGAGTACCAAACTGTATAGAGACGCTTTCGAGGGCTGGTATCAAGATTTGGGTGCTCACGGGGGATAAGATTGAGACTGCAATAAATATAGCTTATGCCTGCAATTTAATTAACAATGATATGAAGCAATTTGTCATCAGTTCAGAAACAGATGCGATTAGAGAAGTTGAAAACAGAGGTGACCAAGTAGAAATTGCTCGTTTTACCAGAGAAGAAGTTAAAAAACAGCTGAAGAAGTGTCTTGAGGAAGCACAACAATACTTGTACACAGCCTCTGGCCCAAAATTAGCACTTGTAATTGATGGGAAGTGTTTGATGTATGCTTTGGATCCAAGTTTGCGAGTGATGCTACTTAATTTGAGCTTGAATTGTAGTTCAGTTGTTTGTTGCCGTGTTTCCCCTCTGCAGAAAGCACAGGTTACCAGTATGGTCAAGAAAGGTGCGAAGAAAATAACACTTGGTATTGGTGATGGTGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGGATAAGTGGGCAGGAAGGAATGCAAGCGGTGATGGCGAGCGATTTTGCAATTGCCCAGTTTCAGTTTCTTACTGATTTATTACTTGTGCATGGACGATGGTCATATCTTAGAATATGCAAGGTCGTTACATACTTTTTTTACAAGAATCTTACATTCACTTTGACTCAATTTTGGTTCACGTTTCAAACTGGATTTTCTGGGCAAAGATTTTATGATGATTGGTTTCAGTCATTATATAATGTGATATTTACAGCACTACCTGTAATTATTGTTGGACTTTTTGACAAGGATGTTAGTGCTTCCCTTTCCAAGAAGTATCCAGAGCTCTATGGTGAGGGTATAAGAAATGCTTTTTTCAAATGGAGGGTCGTGGCAATCTGGGCTTTTTTTGCTTTCTACCAATCTCTGGTCTTTTATTACTTTGTGACTGCTTCTAGTAGTGGTGGTCAAAACTCATCTGGCAGAATATTTGGTCTTTGGGATGTTAGCACAATGGCATTTACCTGCGTTGTAGTGACTGTCAACTTGCGTCTGCTTTTGATGTGCAATTCAATTACTCGGTGGCACTATATAAGTGTTGGTGGAAGCATTTTAGCATGGTTCATATTCATATTCTTATATTCCGGTTTTATGACTCCATATGATAGGCAGGAGAATGTGTATTTTGTCATATACGTCTTGATGAGTACTTTCTACTTCTATCTCGCCCTTCTTCTCGTTCCTATAGCTGCACTACTTTGCGACTTTTTTTACCAAGGGATCCAAAGATGGTTTTTCCCCTATGACTATCAGATTGTCCAAGAAATTCACAGACACGAGCCTGATGGTAGAGGCACAGCAGGTCTGCTGGAGATTGATAATCATCTTACTGCAGCTGAGGCAAGAAGCTATGCCATCTCCCAACTTCCAAGAGAAATTTCAAAGCACACAGGCTTTGCTTTTGATTCACCTGGCTATGAATCATTCTTTGCCGCTCAGCTTGGTGTTTATGCGCCACAGAAGGCGTGGGATGTTGCCCGGAGAGCTAGCATGAGGTCTCGACCAAAGATTTTGCCAGAGAAGTAA 3732 40.76 MNGWDRVRSSRSGLGSGNASLNERVPSSRTVRLGRVQPQAPGHRTIYCNDREANLAVKFKGNSVSTTKYNFFTFIPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMSINNNLVDVLQDEKWESIAWKKLQVGDIIRIKQDGFFPADLLFLAGSNADGICYIETANLDGETNLKIRKALEKTWDYLTPDKASEFKGCEIQCEQPNNSLYTFTGNLIFQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFGTLFFMCLIGAIGSGIFIDRKYYYLNLDKGRENQFNPNNRFVVAILTMFTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLNMYHAESNTSALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGIAQRNGMKIDEIKFWHKDALVTIFKQQGPKSANAVLEKGFNFDDGRIMRGAWRNEPNPDLCKEFFRCLAICHTVLPEGDDSPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVREAHVEKMGKVQDVAYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLASGNDDLKKVSRERLEQFGSSGLRTLCLAYKNLSPDMYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLNLIGCTAIEDKLQEGVPNCIETLSRAGIKIWVLTGDKIETAINIAYACNLINNDMKQFVISSETDAIREVENRGDQVEIARFTREEVKKQLKKCLEEAQQYLYTASGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCSSVVCCRVSPLQKAQVTSMVKKGAKKITLGIGDGANDVSMIQAAHVGVGISGQEGMQAVMASDFAIAQFQFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYGEGIRNAFFKWRVVAIWAFFAFYQSLVFYYFVTASSSGGQNSSGRIFGLWDVSTMAFTCVVVTVNLRLLLMCNSITRWHYISVGGSILAWFIFIFLYSGFMTPYDRQENVYFVIYVLMSTFYFYLALLLVPIAALLCDFFYQGIQRWFFPYDYQIVQEIHRHEPDGRGTAGLLEIDNHLTAAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMRSRPKILPEK 1243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12205985 12216843 + Bpe010184.1 Bpe13g00472 113252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00472 1243 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Bpe13g00472 1243 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Bpe13g00472 1243 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 718 IPR023299 GO:0000166
Bpe13g00472 1243 SFLD Haloacid Dehalogenase 405 922 - -
Bpe13g00472 1243 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Bpe13g00472 1243 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1239 - -
Bpe13g00472 1243 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 844 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g00472 1243 Gene3D - 549 705 IPR023299 GO:0000166
Bpe13g00472 1243 MobiDBLite consensus disorder prediction 1 24 - -
Bpe13g00472 1243 CDD P-type_ATPase_APLT_Dnf-like 61 1031 - -
Bpe13g00472 1243 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 24 1239 - -
Bpe13g00472 1243 Pfam E1-E2 ATPase 142 378 - -
Bpe13g00472 1243 Gene3D - 706 911 IPR023214 -
Bpe13g00472 1243 Gene3D - 124 290 - -
Bpe13g00472 1243 Pfam Cation transport ATPase (P-type) 537 631 - -
Bpe13g00472 1243 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Bpe13g00472 1243 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Bpe13g00472 1243 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1149 IPR023298 -
Bpe13g00472 1243 SUPERFAMILY HAD-like 411 914 IPR036412 -
Bpe13g00472 1243 SUPERFAMILY Calcium ATPase, transduction domain A 141 286 IPR008250 -
Bpe13g00472 1243 SFLD p-type atpase 405 922 IPR044492 -
Bpe13g00472 1243 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00472 Bpe-Chr13:12205985 Bpe15g00554 Bpe-Chr15:16601516 0 dispersed
Bpe13g00472 Bpe-Chr13:12205985 Bpe13g01437 Bpe-Chr13:19643974 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00472 K14802 - csv:101207069 2155.56