Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe13g00484 | GATAATGAAGAATCCTTATTGGCCACCATGTCCGTCTCGTGCTTTGATTGCTTCTCCGACCTACTCTGCGACGAAGACTCGTCTGAAATATTGTCAGAAGAGTCACCAGGAAGCTCGCCGCAACTGGAATCTACGGCGTCACTCGAGGAATCGATCGCCGGATTCATTGAAGACGAGAGACAGTTCGTACCAGAAAGCGACTATTTGTTGGGTTTTCAATCGAAGTCGATGGACGCTTCTGCAAGGGCCGAGTCTGTTGCATGGATTCTCAAGGTTCAAGACTGTTATGGGTTTCAACCATCGACGGCGTACCTCTCCGTCAACTACTTGGATCGGTTCCTTCATTCTCGCCGATTGCCGCCTAATTATACCCAAACTCACAATGATGCTCAGCTTATCTTAATTTGTCAGCAAGCAAATGGGTGGCCAATACAACTCCTCTCTGTTGCTTGCCTGTCACTAGCGGCTAAGATCGAGGAAACAATGGCTCCTTCTTTACTGGATCTTCAGGTTGAAGGAGCTAAATACATATTCGAATCTAAAACAGTATTTCGAATGGAGCTTCTCGTGCTGAGCGTTTTAGATTGGCGATTACGATCCATTACACCGTTCAGCTTCATCGGTTTCTTCGCATGCAAGCTCGACCCGACCGGAACTTTTACGGATTTTCTACTCTCACGAGCTGGAGATATTATTCTGTCGAGTATCCGAGAAGCTAGCTTTCTCGTCCACCGGCCGTCGTGCATAGCTGTTGCAGCTCTACTTAGTGCGGCAAATGAAATCCCAAGCTTGTCACTAGCAAATCCTGGAGAAGCTGAAATGTGGTGCAAAGGGCTTAGCAAAGAGAAAATCATCTGCTGCTACCGACTAATGCAAGAATCAATGGGCTGCAGCCACCGGAGATCGACACTCACACAGCCGAAGATTTTACCTCCGCCACGAGTGACAACGATTTGTACGAGACGGAGGTCCATTGATTCATCATTATCGTCCTTGTCATCGCCTCGCAAAAGGAGAAGATTAAACAACTGA | 1032 | 47.48 | DNEESLLATMSVSCFDCFSDLLCDEDSSEILSEESPGSSPQLESTASLEESIAGFIEDERQFVPESDYLLGFQSKSMDASARAESVAWILKVQDCYGFQPSTAYLSVNYLDRFLHSRRLPPNYTQTHNDAQLILICQQANGWPIQLLSVACLSLAAKIEETMAPSLLDLQVEGAKYIFESKTVFRMELLVLSVLDWRLRSITPFSFIGFFACKLDPTGTFTDFLLSRAGDIILSSIREASFLVHRPSCIAVAALLSAANEIPSLSLANPGEAEMWCKGLSKEKIICCYRLMQESMGCSHRRSTLTQPKILPPPRVTTICTRRRSIDSSLSSLSSPRKRRRLNN | 343 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 12274041 | 12276078 | + | Bpe010195.2 | Bpe13g00484 | 113264 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe13g00484 | 343 | ProSitePatterns | Cyclins signature. | 82 | 113 | IPR006671 | - | |
| Bpe13g00484 | 343 | SUPERFAMILY | Cyclin-like | 48 | 198 | IPR036915 | - | |
| Bpe13g00484 | 343 | SMART | Cyclin_C_2 | 201 | 321 | IPR004367 | - | |
| Bpe13g00484 | 343 | Gene3D | - | 56 | 262 | - | - | |
| Bpe13g00484 | 343 | CDD | CYCLIN | 82 | 191 | IPR013763 | - | |
| Bpe13g00484 | 343 | SMART | cyclin_7 | 87 | 192 | IPR013763 | - | |
| Bpe13g00484 | 343 | Pfam | Cyclin, C-terminal domain | 201 | 303 | IPR004367 | - | |
| Bpe13g00484 | 343 | Pfam | Cyclin, N-terminal domain | 54 | 198 | IPR006671 | - | |
| Bpe13g00484 | 343 | PANTHER | CYCLIN-D1-1 | 12 | 340 | - | - | |
| Bpe13g00484 | 343 | Gene3D | - | 65 | 199 | - | - | |
| Bpe13g00484 | 343 | PANTHER | CYCLINS | 12 | 340 | IPR039361 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe13g00484 | Bpe-Chr13:12274041 | Bpe14g00477 | Bpe-Chr14:4237740 | 1.14E-49 | dispersed | |
| Bpe06g00014 | Bpe-Chr6:151248 | Bpe13g00484 | Bpe-Chr13:12274041 | 3.02E-07 | transposed | |
| Bpe10g00825 | Bpe-Chr10:14275298 | Bpe13g00484 | Bpe-Chr13:12274041 | 8.31E-130 | wgd | |
| Bpe13g00484 | Bpe-Chr13:12274041 | Bpe13g01449 | Bpe-Chr13:19750201 | 1.38E-153 | wgd | |
| Bpe13g00484 | Bpe-Chr13:12274041 | Bpe06g00097 | Bpe-Chr6:1430128 | 4.82E-42 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe13g00484 | K18810 | - | cit:102622171 | 371.703 |