Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00490 ATGGCTTTGATTGGGACTTGTATGGTGATTGGCGATGGCATCCTCACACCAGCCATTTCTGTTTTATCTGCGGTTTCGGGCATAGAGTACACCATGGCCAAAGAGCATCACAAATATGTGGAAATCCCAGTTACATGCATCATATTGATAGGCCTGTTCGCCCTTCAACATTACGGCACGCACCGGGTCGGGTTCATGTTTGCTCCTATTGTAACCACCTGGCTTCTGTGCATTAGCACTATTGGTCTTTACAATATTATTTACTGGAATCCACACGTGTATCAAGCTCTGTCTCCTCGTTACATGTTCCAATTTTTGAAGAAAACTCAACGAGGAGGTTGGGTGTCACTGGGCGGAATTTTGCTCTGTATAACTGGACCAATAAAGAAAGAAATAGCCTCAATCCACAGACTAAATATTTTGACATTGTTAGTCATTTATCAGTATGTCCAATTTTCAATTAAGTATAAATATGAATTGTTGTTGCAGCTTGCTTTCACCTTTATGGTTTACCCATCTTTGATTCTAGCTTACATGGGGCAAGCTGCTTATCTTTCTCAAAATCATACTCTCCCAGATGATTATCGAATCGGTTTTTATGTGTCTGTACCAGAGAAATTAAGATGGCCTGTTCTAGTAATTGCCATACTTGCTGCAGTAGTAGGAAGCCAAGCCATTATCACTGGAACTTTCTCCATCATTAAACAATGCTCTTCTTTAGGATGCTTCCCTAAAGTCAAAATAGTCCATACTTCGTCAAAAATCCACGGTCAGATTTACATCCCAGAAATCAACTGGACCTTGATGCTCTTGTGTTTGGCCGTGACGATCGGTTTTAGAGACACCACGCGCTTAGGGAATGCTTCGGGTTTGGCTGTCATTTCAGTGATGTTGGTAACAACATGCCTAATGTCTCTCGTTATCGTCCTTTGTTGGCATCAAAGTGTTCTTCTTGCAATTGGCTTCATATTCTTCTTCGGCACCATTGAAGCTCTCTATTTCTCAGCTTCTCTCATCAAGTTCCTTGAAGGAGCGTGGGTCCCAATCGCCCTCGCGTTATTCTTCTTGGTCGTCATGTATGTCTGGCATTATGGTACGCAAAAGAAGTATGAATTCGATTTAGAAAATAAAGTCTCCATTAATTGGCTTCTCAGTCTTGGGCCGAGTTTAGGTATAGTAAGAGTGCGGGGCATTGGCATTATAAGCACCGAGCTCGAGTCAGGCATCCCAGCCATTTTTTCCCATTTTGTCACCAATCTTCCTGCCTTCCACCAAGTCCTTGTTTTTCTATGCATCAAATCCATCCCACTGGCTCATGTTAGACCCGAGGAGAGATTTCTCGTGGGACGTGTTGGCCCCCGCGAGTTTAGGCTCTACCGATGTGTCGTCCGATATGGATATCGCGATGTGCACAAGGACAATATCGAGTTTGAGAAAGATCTTCTATGTAGCATAGCAGAGTACATAAGGTCGGAAAGCATCAATAACAATGGTAGAAGCAGAATTATAAGCAAGGAGGACGATAAAATGGCGGTTGTGGGGTTGTCTTCGACCCACACTCACAGAATTCAAATGAAAGAAGATTACACAAATCTTGAAGATGTGGCCGGAACATCGGAGCTCCGAGAAATTCAATCTCCGCCGAAGCTCCAGCCGAGGAAAAGGGTGAGATTTATTTTGCCAGAGAGTCCGATAATCGACAGGGAGAATATGAACGAATTGAAGGACCTGATGGAAGCACGGGAGGCGGGAATTGCTTATATTTTAGGACGGTCCCACATGAAAGCAAAGCAAGGATCGAGCATGGTAAAAAAGCTTGTAATTAACTATGGCTACGAGTTCTTGAGAAAAAACAGCAGAGAACCGAGCCACCCTCTGACTTTATCTCATGCATCCACTCTAGAAGTGGGGATGATGTACAATTTGGATTTGATGAAATTAGTAATGGATAAGAATGTACTGGTTTTGAGCTTCGTCCTTCTGCTTCTATTTGGAGGTGTTTCTTCAGCTTCAGCCTCGCCTGCTAAGATTTTTGGTGGGGTTTTCTCCAATGCTGTGTCTATGCTCATGAAGCGGCTATGGTCATTCAAAACGACCACCAAAACAGGCATAGATCTTGATCGCTTTCTTTACTTTCCATCTCAATCTTTTCTCTTCCTTAATTTATCGATTTCTGGTCGTCCGATGATGAAGTTTGAGAGTGGGTATAATGTGGAGACTGTATTTGATGGAAGCAAGCTTGGCATTGAACCTTACTCTGTTGAAGTTTTGCCTGGTGGGGAGCTTCTCATAATGGATTCAGCAAATAGTAACATCTACAGGATCTCTGCTTCTCTGTCTCTTTACAGCAGGCCGAAGCTGGTTACAGGATCTGCTGAAGGATACTCTGGACATGTGGATGGGAAGGCTCGTGAGGCCCGGATGAACCACCCCAAAGGCCTCGCAGTTGACGATAGGGGAAACATTTATGTTGCAGACACAATGAATTTAGCTATCAGGAAGATAAGTGATTCTGGGGTAACGACAATTGCTGGAGGTAAATGGGGATGGGGAGGTGGCCACGTTGATGGGCCAAGTGAGGATTCAAAGTTCTCAAACGACTTTGATGTTGTTTATATTGGAAGCAGTTGCTCACTTCTCGTTGTAGACAGAGGAAATCGTGCAATTCGGGAGATTCAACTTCATTTCGATGATTGTGCTTATCAATATGGCAGTGGTTTTCCAGTGGGAATAGCAATGCTTGTCGGTGCTGGGTTCTTCGGCTATATTCTAGCATTCCTGCAATGTAGAATGACCTCTTTTGTCAACTCACAGAATGGTCCAATGAAGACAAACATTCCACCAAATTCATATCAGAAGCCTCTGAAATCTGTTAGGCCGCCATTAATCCCTTCGGAAGAAGAGTCGGAGAAGCAAGAAGAAGGTTTCTTCAGTTCTGCAGGAAAGCTTGTCGCCAACACAGGGACTTCCATCTTAGAAATTATGGGTGGGATTTTTCCGGGCCTGAAAAAGAAGTCATCAACCTACAAATACGATATCCAACAACAACAACAACAATACTCCAATTCTTGGCCTTTACAGGAAAGTTTCGTAATACCAAACGAAGATGAACCCCCTTCGATTGAAACAAGAACTCCCACCCCTCGGAAAACCTATGCTTTCATGTCTAAAGATGCTGACAAAATGCACCAACTGAGGCAAAGCAAGGCATTCTATAACGGGTGGGATGGTGATAAGCCACAGCCACAACCACTGCCACAGCAAAAACAGCAGCACCATCATGAGTATCTTTCATCGATCCCACATACTTACTACGAGAGGACCCACGAGAGGACCAACGAGATTGTTTTTGGGGCCGTTCAGGAACTCGACAGGAAAGGAGAATTGTCTGTTATAAGACCTGTTGATTACGCCAATCCTGGGTTTGAGCATCATAATATTCGGGCGCGAAGTGCTTCTATGGGATATAACTATGGCTATTGA 3483 43.78 MALIGTCMVIGDGILTPAISVLSAVSGIEYTMAKEHHKYVEIPVTCIILIGLFALQHYGTHRVGFMFAPIVTTWLLCISTIGLYNIIYWNPHVYQALSPRYMFQFLKKTQRGGWVSLGGILLCITGPIKKEIASIHRLNILTLLVIYQYVQFSIKYKYELLLQLAFTFMVYPSLILAYMGQAAYLSQNHTLPDDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTIGFRDTTRLGNASGLAVISVMLVTTCLMSLVIVLCWHQSVLLAIGFIFFFGTIEALYFSASLIKFLEGAWVPIALALFFLVVMYVWHYGTQKKYEFDLENKVSINWLLSLGPSLGIVRVRGIGIISTELESGIPAIFSHFVTNLPAFHQVLVFLCIKSIPLAHVRPEERFLVGRVGPREFRLYRCVVRYGYRDVHKDNIEFEKDLLCSIAEYIRSESINNNGRSRIISKEDDKMAVVGLSSTHTHRIQMKEDYTNLEDVAGTSELREIQSPPKLQPRKRVRFILPESPIIDRENMNELKDLMEAREAGIAYILGRSHMKAKQGSSMVKKLVINYGYEFLRKNSREPSHPLTLSHASTLEVGMMYNLDLMKLVMDKNVLVLSFVLLLLFGGVSSASASPAKIFGGVFSNAVSMLMKRLWSFKTTTKTGIDLDRFLYFPSQSFLFLNLSISGRPMMKFESGYNVETVFDGSKLGIEPYSVEVLPGGELLIMDSANSNIYRISASLSLYSRPKLVTGSAEGYSGHVDGKAREARMNHPKGLAVDDRGNIYVADTMNLAIRKISDSGVTTIAGGKWGWGGGHVDGPSEDSKFSNDFDVVYIGSSCSLLVVDRGNRAIREIQLHFDDCAYQYGSGFPVGIAMLVGAGFFGYILAFLQCRMTSFVNSQNGPMKTNIPPNSYQKPLKSVRPPLIPSEEESEKQEEGFFSSAGKLVANTGTSILEIMGGIFPGLKKKSSTYKYDIQQQQQQYSNSWPLQESFVIPNEDEPPSIETRTPTPRKTYAFMSKDADKMHQLRQSKAFYNGWDGDKPQPQPLPQQKQQHHHEYLSSIPHTYYERTHERTNEIVFGAVQELDRKGELSVIRPVDYANPGFEHHNIRARSASMGYNYGY 1160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12314006 12320770 - Bpe010202.1 Bpe13g00490 113270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00490 1160 Pfam K+ potassium transporter 163 469 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe13g00490 1160 Pfam K+ potassium transporter 1 126 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe13g00490 1160 Gene3D - 681 893 IPR011042 -
Bpe13g00490 1160 MobiDBLite consensus disorder prediction 1072 1095 - -
Bpe13g00490 1160 SUPERFAMILY NHL repeat 737 893 - -
Bpe13g00490 1160 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe13g00490 1160 MobiDBLite consensus disorder prediction 945 969 - -
Bpe13g00490 1160 TIGRFAM kup: potassium uptake protein 1 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bpe13g00490 1160 PANTHER POTASSIUM TRANSPORTER 6 1 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01554 Bpe-Chr11:11559883 Bpe13g00490 Bpe-Chr13:12314006 0 dispersed
Bpe13g00490 Bpe-Chr13:12314006 Bpe13g01456 Bpe-Chr13:19841422 0 dispersed
Bpe08g00989 Bpe-Chr8:12247243 Bpe13g00490 Bpe-Chr13:12314006 4.39E-74 transposed
Bpe13g00490 Bpe-Chr13:12314006 Bpe13g01455 Bpe-Chr13:19839059 2.37E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00490 K03549 - vvi:100251966 970.304