Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00492 AAATACAGCACGGCGGCAGCCATTGAAGAACCTATCAATCCTTCTATCAACGTCAAATACACTCAGCTTTTGATCAATGGCCAATTTGTCGATTCAGCTTCCGGTAATAGCTCGATAAACCTCCCATTGACAGGCGTCCAAATTGTTAGTTCTTTTAAGCCATTTTCTCTCTCTATAATTTCAGGAAAAACTTTTCCGACATTGGACCCGAGGACCGGCGAGGTAATCGCTCATGTTTCTGAGGGAGATGCTGAAGACATTGATCGAGCGGTTGCAGCCGCTCGCCGAGCATTTGACGAGGGACCATGGCCAAAGATGACTGCTTATGAACGATCTCGGATTATCCTGCGGTTCGCCGATTTAATGGAGAAGCACAACGATGAACTCGCGGCTCTTGAAACTTGGGATAACGGGAAGCCATATGAACAGTCTGCGAAAGCTGAAATTCCTATGCTAGTTCGTTTGTTCCGCTACTATGGAGGTTGGGCGGATAAGATCCACGGCCTTACAGTTCAGGCCGACGGCCCTCACCATGTTCAAACCTTGCATGAACCGATCGGAGTTGTGGGTCAGATTATTCCATGGAATTTTCCTCTTCTAATGTACGCATGGAAGGTTGGACCGGCACTGGCCTGTGGAAACACCATTGTTCTTAAAACAGCTGAGCAGACTCCATTGTCTGCCCTGTTCGTAACGAAGCTATTACACGAGGCCGGACTTCCTGATGGTGTGATTAATATTGTTTCTGGTTTTGGACCTACTGCCGGTGCTGCTCTTGCCAGTCATATGGATGTCGACAAGCTTGCTTTCACTGGTTCGACCGAAACTGGGAAAATCGTACTTGGATTGTCAGCGACAAGCAATCTTAAGCCGGTAACTTTGGAACTTGGCGGAAAATCCCCTTTCATCGTCTGTGAGGATGCTGACGTGGATACAGCCGTCGAGCTCGCTCATTTTGCTCTATTCTTTAACCAAGGGCAATGCTGCTGCGCTGGTTCTCGTACTTTCGTACACGAAAGTGTGTATGATGAGTTCTTGGAGAAAGCAAAGGAGCGGGCTATGAAACGAACTGTTGGTGATCCGTTCAAGGGGGGTATTGAGCAAGGGCCTCAAATTGATTCCGATCAGTTTGAAAAGATTCTGAAATACATAAAATCTGGAGTTGAAAGTGGAGCCAATCTCGAAACTGGAGGAGAGAGGCTTGGCTCAAAGGGTTATTACATCAAACCCACTGTTTTCTCAAATGTTCAGGATGACATGTTGATTGCAAAAGATGAGATCTTTGGTCCAGTTCAGACAATTTTGAAGTTCAAAAAACTCGATGAGGTTATTAAGAGGTCAAACGCGAGTCGTTTTGGGCTGGCAGCCGGAGTATTCACGAAGAACATTGATACGGCCAATACGTTAACCCGAGCTCTGCGAGTAGGATCACTTTTTGTGAATTGTTTCGATGTATTCGATGCTGCAATTCCATTTGGTGGGTATAAGATGAGTGGAACTGGAAGAGAAAAAGGAATTTACAGCCTCAGCAATTATCTTCAAGTCAAGGCTGTCGTTACTCTCTTGAAGAATCCTGCTTGGCTT 1584 46.02 KYSTAAAIEEPINPSINVKYTQLLINGQFVDSASGNSSINLPLTGVQIVSSFKPFSLSIISGKTFPTLDPRTGEVIAHVSEGDAEDIDRAVAAARRAFDEGPWPKMTAYERSRIILRFADLMEKHNDELAALETWDNGKPYEQSAKAEIPMLVRLFRYYGGWADKIHGLTVQADGPHHVQTLHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVINIVSGFGPTAGAALASHMDVDKLAFTGSTETGKIVLGLSATSNLKPVTLELGGKSPFIVCEDADVDTAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLEKAKERAMKRTVGDPFKGGIEQGPQIDSDQFEKILKYIKSGVESGANLETGGERLGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQTILKFKKLDEVIKRSNASRFGLAAGVFTKNIDTANTLTRALRVGSLFVNCFDVFDAAIPFGGYKMSGTGREKGIYSLSNYLQVKAVVTLLKNPAWL 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12333457 12335900 + Bpe025217 Bpe13g00492 113272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00492 528 Pfam Aldehyde dehydrogenase family 63 518 IPR015590 GO:0016491
Bpe13g00492 528 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 38 - -
Bpe13g00492 528 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 528 - -
Bpe13g00492 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 300 489 IPR016163 GO:0016620
Bpe13g00492 528 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 322 333 IPR016160 GO:0016491
Bpe13g00492 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 518 IPR016162 GO:0016491
Bpe13g00492 528 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 294 301 IPR029510 GO:0016491
Bpe13g00492 528 CDD ALDH_F2BC 18 520 - -
Bpe13g00492 528 SUPERFAMILY ALDH-like 60 519 IPR016161 GO:0016491
Bpe13g00492 528 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 3 38 - -
Bpe13g00492 528 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 59 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00279 Bpe-Chr13:10685412 Bpe13g00492 Bpe-Chr13:12333457 1.19E-12 dispersed
Bpe13g00492 Bpe-Chr13:12333457 Bpe13g01081 Bpe-Chr13:16366936 1.22E-174 dispersed
Bpe12g00589 Bpe-Chr12:11666187 Bpe13g00492 Bpe-Chr13:12333457 0 wgd
Bpe13g00492 Bpe-Chr13:12333457 Bpe13g01458 Bpe-Chr13:19861523 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00492 K00128 - rcu:8282568 863.988