Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g00492 | AAATACAGCACGGCGGCAGCCATTGAAGAACCTATCAATCCTTCTATCAACGTCAAATACACTCAGCTTTTGATCAATGGCCAATTTGTCGATTCAGCTTCCGGTAATAGCTCGATAAACCTCCCATTGACAGGCGTCCAAATTGTTAGTTCTTTTAAGCCATTTTCTCTCTCTATAATTTCAGGAAAAACTTTTCCGACATTGGACCCGAGGACCGGCGAGGTAATCGCTCATGTTTCTGAGGGAGATGCTGAAGACATTGATCGAGCGGTTGCAGCCGCTCGCCGAGCATTTGACGAGGGACCATGGCCAAAGATGACTGCTTATGAACGATCTCGGATTATCCTGCGGTTCGCCGATTTAATGGAGAAGCACAACGATGAACTCGCGGCTCTTGAAACTTGGGATAACGGGAAGCCATATGAACAGTCTGCGAAAGCTGAAATTCCTATGCTAGTTCGTTTGTTCCGCTACTATGGAGGTTGGGCGGATAAGATCCACGGCCTTACAGTTCAGGCCGACGGCCCTCACCATGTTCAAACCTTGCATGAACCGATCGGAGTTGTGGGTCAGATTATTCCATGGAATTTTCCTCTTCTAATGTACGCATGGAAGGTTGGACCGGCACTGGCCTGTGGAAACACCATTGTTCTTAAAACAGCTGAGCAGACTCCATTGTCTGCCCTGTTCGTAACGAAGCTATTACACGAGGCCGGACTTCCTGATGGTGTGATTAATATTGTTTCTGGTTTTGGACCTACTGCCGGTGCTGCTCTTGCCAGTCATATGGATGTCGACAAGCTTGCTTTCACTGGTTCGACCGAAACTGGGAAAATCGTACTTGGATTGTCAGCGACAAGCAATCTTAAGCCGGTAACTTTGGAACTTGGCGGAAAATCCCCTTTCATCGTCTGTGAGGATGCTGACGTGGATACAGCCGTCGAGCTCGCTCATTTTGCTCTATTCTTTAACCAAGGGCAATGCTGCTGCGCTGGTTCTCGTACTTTCGTACACGAAAGTGTGTATGATGAGTTCTTGGAGAAAGCAAAGGAGCGGGCTATGAAACGAACTGTTGGTGATCCGTTCAAGGGGGGTATTGAGCAAGGGCCTCAAATTGATTCCGATCAGTTTGAAAAGATTCTGAAATACATAAAATCTGGAGTTGAAAGTGGAGCCAATCTCGAAACTGGAGGAGAGAGGCTTGGCTCAAAGGGTTATTACATCAAACCCACTGTTTTCTCAAATGTTCAGGATGACATGTTGATTGCAAAAGATGAGATCTTTGGTCCAGTTCAGACAATTTTGAAGTTCAAAAAACTCGATGAGGTTATTAAGAGGTCAAACGCGAGTCGTTTTGGGCTGGCAGCCGGAGTATTCACGAAGAACATTGATACGGCCAATACGTTAACCCGAGCTCTGCGAGTAGGATCACTTTTTGTGAATTGTTTCGATGTATTCGATGCTGCAATTCCATTTGGTGGGTATAAGATGAGTGGAACTGGAAGAGAAAAAGGAATTTACAGCCTCAGCAATTATCTTCAAGTCAAGGCTGTCGTTACTCTCTTGAAGAATCCTGCTTGGCTT | 1584 | 46.02 | KYSTAAAIEEPINPSINVKYTQLLINGQFVDSASGNSSINLPLTGVQIVSSFKPFSLSIISGKTFPTLDPRTGEVIAHVSEGDAEDIDRAVAAARRAFDEGPWPKMTAYERSRIILRFADLMEKHNDELAALETWDNGKPYEQSAKAEIPMLVRLFRYYGGWADKIHGLTVQADGPHHVQTLHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVINIVSGFGPTAGAALASHMDVDKLAFTGSTETGKIVLGLSATSNLKPVTLELGGKSPFIVCEDADVDTAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLEKAKERAMKRTVGDPFKGGIEQGPQIDSDQFEKILKYIKSGVESGANLETGGERLGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQTILKFKKLDEVIKRSNASRFGLAAGVFTKNIDTANTLTRALRVGSLFVNCFDVFDAAIPFGGYKMSGTGREKGIYSLSNYLQVKAVVTLLKNPAWL | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 12333457 | 12335900 | + | Bpe025217 | Bpe13g00492 | 113272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g00492 | 528 | Pfam | Aldehyde dehydrogenase family | 63 | 518 | IPR015590 | GO:0016491 | |
Bpe13g00492 | 528 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 3 | 38 | - | - | |
Bpe13g00492 | 528 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 59 | 528 | - | - | |
Bpe13g00492 | 528 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 300 | 489 | IPR016163 | GO:0016620 | |
Bpe13g00492 | 528 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 322 | 333 | IPR016160 | GO:0016491 | |
Bpe13g00492 | 528 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 62 | 518 | IPR016162 | GO:0016491 | |
Bpe13g00492 | 528 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 294 | 301 | IPR029510 | GO:0016491 | |
Bpe13g00492 | 528 | CDD | ALDH_F2BC | 18 | 520 | - | - | |
Bpe13g00492 | 528 | SUPERFAMILY | ALDH-like | 60 | 519 | IPR016161 | GO:0016491 | |
Bpe13g00492 | 528 | PANTHER | ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE | 3 | 38 | - | - | |
Bpe13g00492 | 528 | PANTHER | ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE | 59 | 528 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g00279 | Bpe-Chr13:10685412 | Bpe13g00492 | Bpe-Chr13:12333457 | 1.19E-12 | dispersed | |
Bpe13g00492 | Bpe-Chr13:12333457 | Bpe13g01081 | Bpe-Chr13:16366936 | 1.22E-174 | dispersed | |
Bpe12g00589 | Bpe-Chr12:11666187 | Bpe13g00492 | Bpe-Chr13:12333457 | 0 | wgd | |
Bpe13g00492 | Bpe-Chr13:12333457 | Bpe13g01458 | Bpe-Chr13:19861523 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g00492 | K00128 | - | rcu:8282568 | 863.988 |