Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00502 ATGAGAGGTGAGAGTGATTTTAGTGTCCGGGCCACTCGTTTATCATCACCAGATTTGTCTAAAGTTGGAAATAGAACTCTAAAGGGCAATATTCTTGCTCCTTCTCGTGGCTATGGTGGTAGGAATCTGATTCCGGGAGGAACACTTTGTGTGGATGAAAATAGAGTTGTTGCTTTGATGTCCATAAAAAATGATCTAATTGATCCACAAAATGTTCTGGAAAATTGGGACATTAACTCGGTGGATCCTTGTAGCTGGAGGATGATTACTTGCTCCCCTGATGGATATGTATCAGCTTTGGGGCTGCCCAGTCAGAGCTTGTCTGGTACCTTATCTTCTGGAATTGGAAATCTTAGTAATCTTCAGTCAGTGCTGCTTCAGAATAATGCCATTTCAGGTCCAATTCCATTTACCATAGGCAAGTTGGAGAAGCTTCGGACTCTCGATCTCTCTAGCAATGCGTTCTCTGGTGAAATACCAAGTTCTTTGGGGGACCTAAAGAACCTAAATTATTTGAAGTTGAACAACAACAGCCTCACTGGATCTTGTCCTGAGTCTTTATCCACAGTCGTTGGTCTCTCTCTCGTGGACCTTTCTTTTAACAACCTGACTGGTTCGTTGCCAAAAATTTCAGCAAGAACTTTCAAAATTATAGGTAACCCTCTAATTTGCGGGCCGAGCAACTGTTCTGGAGTGTATCCAGAGCCACTGTCATTCACACCTGATTCCCTGAAAGATCAATACGACCCAGAGGTATGCTTAGGCCACCTGCAGAGGTACACGTTTAAGGAGCTCCGAGCAGCCACTGATCATTTTAACCCAAAGAATATTTTAGGGAGAGGGGGATTTGGAATTGTGTACAAGGGAAGTTTCAATGATGGAACTCTTGTTGCTGTTAAACGATTGAAAGACTACAATACGGCTGGTGGGGAAATACAGTTCCAGACCGAAGTAGAGATGATAAGTTTAGCAGTTCATAAAAATCTTCTCAGATTATGCGGATTTTGTTCGAATGAGAATGAACGCCTTCTTGTTTATCCCTACATGCCTAATGGAAGTGTTGCCTCCCGATTGAGAGATCGTGTTCATGGTTGTCCGGCTCTGAACTGGGTGAAACGCAAGAGGATAGCTTTAGGCACTGCGAGGGGGTTGGTCTATTTACACGAGCAATGTGACCCGAAAATTATCCACCGTGATGTAAAAGCAGCTAACATATTGCTTGATGAAGACTTCGACGCTGTGGTTGGAGATTTTGGGTTGGCCAAGCTTTTAGATCACAGAGATTCTCATGTAACCACTGCTGTTCGAGGAACTGTCGGCCACATTGCCCCGGAGTACTTATCGACCGGCCAATCATCAGAGAAAACTGATGTCTTTGGCTTCGGAATATTACTTCTCGAGCTTATAACTGGTCAAAAAGCTTTGGATTTTGGACGAGCAGCTAATCAGAAGGGCATAATGCTTGACTGGGTGAGAAAGCTCCATCAAGAGGGAAAGCTAAATCTGATGGTGGACAAGGATCTGAAGAACAACTTTGATAGAATCGAACTGGAAGAGATGGTTCAAGTGGCATTGTTGTGCACCCAGTTTAATCCTCTGCACCGGCCAAAAATGTCGGAAGTATTAAAGATGTTAGAAGGAGATGGGTTGGCTGAGAAATGGGAGGCATCTCAGCAGGTGGAGACACCTCGATTCCGATCCAACGAACACCCTCAGAGGTATTCAGATTACATCGAAGACTCATCGATGGTAGTAGAGGCAATGGAGCTATCGGGTCCGAGGTGA 1785 44.37 MRGESDFSVRATRLSSPDLSKVGNRTLKGNILAPSRGYGGRNLIPGGTLCVDENRVVALMSIKNDLIDPQNVLENWDINSVDPCSWRMITCSPDGYVSALGLPSQSLSGTLSSGIGNLSNLQSVLLQNNAISGPIPFTIGKLEKLRTLDLSSNAFSGEIPSSLGDLKNLNYLKLNNNSLTGSCPESLSTVVGLSLVDLSFNNLTGSLPKISARTFKIIGNPLICGPSNCSGVYPEPLSFTPDSLKDQYDPEVCLGHLQRYTFKELRAATDHFNPKNILGRGGFGIVYKGSFNDGTLVAVKRLKDYNTAGGEIQFQTEVEMISLAVHKNLLRLCGFCSNENERLLVYPYMPNGSVASRLRDRVHGCPALNWVKRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFDAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRAANQKGIMLDWVRKLHQEGKLNLMVDKDLKNNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEKWEASQQVETPRFRSNEHPQRYSDYIEDSSMVVEAMELSGPR 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12415241 12420472 + Bpe025218 Bpe13g00502 113282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00502 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Bpe13g00502 594 PANTHER PROTEIN NSP-INTERACTING KINASE 3 245 594 - -
Bpe13g00502 594 Gene3D Transferase(Phosphotransferase) domain 1 349 564 - -
Bpe13g00502 594 PANTHER PROTEIN NSP-INTERACTING KINASE 3 54 245 - -
Bpe13g00502 594 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Bpe13g00502 594 ProSiteProfiles Protein kinase domain profile. 272 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00502 594 SMART serkin_6 272 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00502 594 Gene3D Ribonuclease Inhibitor 53 231 IPR032675 -
Bpe13g00502 594 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 245 594 - -
Bpe13g00502 594 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 54 245 - -
Bpe13g00502 594 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Bpe13g00502 594 Gene3D Phosphorylase Kinase; domain 1 243 348 - -
Bpe13g00502 594 SUPERFAMILY Protein kinase-like (PK-like) 246 546 IPR011009 -
Bpe13g00502 594 Pfam Protein kinase domain 274 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00502 594 SUPERFAMILY L domain-like 53 214 - -
Bpe13g00502 594 Pfam Leucine rich repeat N-terminal domain 57 92 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00502 Bpe-Chr13:12415241 Bpe15g00364 Bpe-Chr15:15187026 1.53E-130 dispersed
Bpe07g00340 Bpe-Chr7:2671734 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
Bpe08g00675 Bpe-Chr8:7434258 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
Bpe08g00760 Bpe-Chr8:9315941 Bpe13g00502 Bpe-Chr13:12415241 1.55E-127 transposed
Bpe11g01195 Bpe-Chr11:8910403 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
Bpe12g00431 Bpe-Chr12:9917008 Bpe13g00502 Bpe-Chr13:12415241 3.83E-11 transposed
Bpe14g01062 Bpe-Chr14:7945411 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
Bpe15g00442 Bpe-Chr15:15880815 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
Bpe13g00502 Bpe-Chr13:12415241 Bpe13g01475 Bpe-Chr13:19998380 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63666 PF00069 Pkinase 5.00E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00502 - - zju:107428687 917.531