Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00511 ATGCATGATTCCATCGGAATTCCTGCTTGCTTCTCCTCCGCCGAGAAAGCGACGGAAAACGACCCTGCGATAGCAATCAGATCAGGGCAGAGCGTGTTCATGTCAGTATACCAGACGAAGATCGCCGGTCAGTGTCGCTTCGTAACCATCACGTGGTGCAAGAATCTGCTCTTGCATGGCCTCTCAGTTTCTGTTCAAGGATCTGAAAGAGTCGAGCAATACATCTGCAAATTCGAGCTTAAACCCTGGTATTTCTGGAGAAAACAAGGCTCCAAGCATTTCCAAGTGGACGGTAAAGCCGTCACCGTGGTTTGGGATCTCAAGGCTGCTAAATTCAACGGGGAGACCGAGCCTCAGTCTGATTATTACGTCGCCATTGTTTCTGATGAAGAGGTCGTTCTTCTCGTCGGCGATCAAAAGAAAGACGCATTCAGAAAAACTGGTTGCCGGCCAGCCCTTATGGACCCATTGCTGGTTTGGAAGAAAGAACACGTCTTTGGAAAGAAGAAATATTCGACGAGAATTCAGTTCCATGAGAAAGGGAAGTTTCATGCGATTTCAGTAGAGTGCATTAATGGCGGATCAAATAGTTCTGATTCAATTGGGTATGATCCAGAGTTAGAGATAAGAATAGATGGGGAATCAGCTGTTCGAGTGAAGCATCTTCAATGGAAATTCAGAGGAAATGATTTCATTGTTATAAGCCAGACAAGATTGGAAGTTTACTGGGACCTCCATGACTGGCTATTCTGCACCGGTCCAAGAAACGGTCTTTTTATATTCCGGCCGATTCCATCTTCTTCATCACCGTCATCGTCTGCAGCAAAACTAGCTCCTCCATCGATTCAAGATGACGATGAGAATTACGCAAGTGGGTCATCTAAATTTTGCTTGTTCCTCTATACGTGGAAGATAGAGTGA 921 45.6 MHDSIGIPACFSSAEKATENDPAIAIRSGQSVFMSVYQTKIAGQCRFVTITWCKNLLLHGLSVSVQGSERVEQYICKFELKPWYFWRKQGSKHFQVDGKAVTVVWDLKAAKFNGETEPQSDYYVAIVSDEEVVLLVGDQKKDAFRKTGCRPALMDPLLVWKKEHVFGKKKYSTRIQFHEKGKFHAISVECINGGSNSSDSIGYDPELEIRIDGESAVRVKHLQWKFRGNDFIVISQTRLEVYWDLHDWLFCTGPRNGLFIFRPIPSSSSPSSSAAKLAPPSIQDDDENYASGSSKFCLFLYTWKIE 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12472693 12473613 + Bpe010220.1 Bpe13g00511 113291

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00511 306 PANTHER EXPRESSED PROTEIN 5 306 IPR008586 -
Bpe13g00511 306 Pfam Plant protein of unknown function (DUF868) 28 304 IPR008586 -
Bpe13g00511 306 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 5 306 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00511 - - - mcha:111005191 447.588
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00234 Bpe-Chr13:10353691 Bpe13g00511 Bpe-Chr13:12472693 1.09E-106 dispersed
Bpe13g00511 Bpe-Chr13:12472693 Bpe08g00197 Bpe-Chr8:1111841 2.50E-34 dispersed
Bpe13g00511 Bpe-Chr13:12472693 Bpe13g01488 Bpe-Chr13:20257365 0 wgd
Bpe13g00511 Bpe-Chr13:12472693 Bpe15g00656 Bpe-Chr15:17297171 2.78E-125 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g633 Blo01g00381 . Bda01g02204 Bda11g01292 Bpe13g00511 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01292 . . . Bma06g00597 . . . . Cma05g00046 . Car05g00035 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001841 6 1 3 2 4 2 2 2 2 2 1 2 2 1 2 3 2 5 2 2 2 2 2 2 1 2 1 2 3 3 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00511 Bpe_Chr13 FPKM 12.65543 13.649666 9.421469 9.972912 37.593079 35.681973 36.662941 1.207835 1.204654 0.995459