Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00544 ATGTTTAGAAGCAAGGTTGGGAAGATGATGAAGTGCATTTGTCCCGGAAGTCAATTCAAAGTCGATGAAATTGATCATTCATCCGAGTCTCTGGCAACTAGAGACTATTCTGCTAGTGGTTTTTCGTCTCGAACTGCAGAGGTGGAAACAAAGGTGGAGACTAGCAACATCGAAGAAGCCGAGTCGTCTCTTCGCAAAAGTGGTTTTCTCAACTACGAGGAAGCAAGAGCATTACTCGGAAGGCTAGAGTATCAAAAAGGAAACGTAGAAGCAGCTCTCCATGTGTTCGAAGGAATCGATATCACTGCAGTGGCTCCTCGGATGAGAACTTCGATTTCTAGAAGATGCGAACAAATTTATCGTCGGCATTCGCAGAGCGATACCCCCCCGCTTATGTCCTTGCATGCCGTTAGTTTACTTCTCGAAGCCGTTTATCTCAAAGCAAAATCGTTGCAAAGTCTGGGTAGATTCGCAGAGGCAGCAAAATCTTGCATAGTTGTTTTAGATACTATTCAATCTGCACTCCCAGAGGGCTTGCCGGAAAACTTTGCCATAGATGGTAAATTACAAGAAATTTTGACAAAATCTGTCGAGTTGCTCCCTGAGTTATGGAAATTAGCGGGTTGTCTTCAAGAATGTATCTTGTCGTATAGGCGGGCTCTCCTCTACCGATGGAATCTCGACGTGAAAACTAGTTCGAAGATCGAAAAGGAATTTGCAGTTTTTCTTCTCTACAGTGGTTGTGAAGCAAATCCTCCGAATCTTCGGTCGCAGATGGAAGGCTCTTTCGTAGCGAAGAACAACTTGGAAGAAGCAGTTCTTTTGTTATTGATTCTCATGAGAAAATATTTGCTTGGAGTAATTGGATGGGACCCCTCCATTATCGAACATCTTACCTTTGCGCTCACCATTTCGGGTGACTTCCGATCATTAGCGCATCAAGTCGAACAGTTGCTTCCTGGAATTATATCGAGGAGAGAAAAATATTGCACTCTCGCTCTCTGTTTCCATGCCGAAGGTGAATATATTGTTGCTTTGAATCTTTTGAGAAATTTTCTGAACAACAGAGAAAATCCAAACTGCATACTGGAACTACTTTTGACTTCGAAACTTTGTGCCGAAAACTTGGTTTGTCTCGACGAAGGGATCGGTCTTGTCCAAAAAGCAATTTCGATGATGCACGGAAAATGCTCTCAAATGCTATGCGTCGCCAATTGCTTATTTGGTGTCTTGTTATCGGCTGAATCAAGATCAGTTGCCTCTCATTCTGAGAGGATTTTGAAGCAGGCAGAAGCATTGAAGGTCTTAGAAACCGCAGAAAAGGCGACGAGAGAAAAAGACCCCTACATTATGTTTAATCTTTGTCTCGAACTTGCGGAGCAGCGGAAATTGGATTTGGCGCTATATTTTGCAAAGCAATTGCTTAGACTCGTTGCCGGCTCAAGTGCAAAAGGGTATCTACTTTTAGCCCGGATATTGTCAGCTCAGAAACGATTTTCAGACGCAGAGACTGTAATAAATGTCGCTCTTGAGCAGACTGGAAAGTGGGATCAAGGGGAGTTGTTAAGAACCAAAGCTAAACTGCAGACTGCGCAGGGGCAGGTGAAGAAGTCGATAGAGTCGTATACTCGCCTTTTGGCCGTTCTTCAAGTTCAGACTAGAAGTTTTGATTTTGTGAAGAAGCTCACCCAGAAGAAGAGCAGCCATGATAGAAGGCTTGAAATGGAAGCATGGCATGATTTGGCCAACATTTACACAGGCTTGTCTCAATGGCGGGATGCGGAGGTCTGTCTTTCAAAGTCTGAAGCCATCAACCCTTATTCTGCTGCAAGATGGCACTCCACTGGTTTGTTGTACGAGGCTAAAGGGCTTGATCGAGAGGCTCTGAAAGCATACAAAAAGGCATTGGATGTGGAAGCCGGCCATGTCCCGAGCTTGATCTCTGCAGCCTGTGTACTGAGAAGGCTTGGAGGTCAATGTTTGGGTGTTGTGAGAAGCTTGCTAGGTGATGCCCTTCGGCTCGACCGGATGAACCCGTCGGCCTGGTATTATTTGGGGCTGCTGTACAAGTCTGACGAGAGAGCTTCAGCTATGGAGATTGCTGAATGCTTTGAAGCTTCGGCTCTCCTCGAAGAATCTGCACCAGTTGAACCCTTCAGATGA 2163 45.08 MFRSKVGKMMKCICPGSQFKVDEIDHSSESLATRDYSASGFSSRTAEVETKVETSNIEEAESSLRKSGFLNYEEARALLGRLEYQKGNVEAALHVFEGIDITAVAPRMRTSISRRCEQIYRRHSQSDTPPLMSLHAVSLLLEAVYLKAKSLQSLGRFAEAAKSCIVVLDTIQSALPEGLPENFAIDGKLQEILTKSVELLPELWKLAGCLQECILSYRRALLYRWNLDVKTSSKIEKEFAVFLLYSGCEANPPNLRSQMEGSFVAKNNLEEAVLLLLILMRKYLLGVIGWDPSIIEHLTFALTISGDFRSLAHQVEQLLPGIISRREKYCTLALCFHAEGEYIVALNLLRNFLNNRENPNCILELLLTSKLCAENLVCLDEGIGLVQKAISMMHGKCSQMLCVANCLFGVLLSAESRSVASHSERILKQAEALKVLETAEKATREKDPYIMFNLCLELAEQRKLDLALYFAKQLLRLVAGSSAKGYLLLARILSAQKRFSDAETVINVALEQTGKWDQGELLRTKAKLQTAQGQVKKSIESYTRLLAVLQVQTRSFDFVKKLTQKKSSHDRRLEMEAWHDLANIYTGLSQWRDAEVCLSKSEAINPYSAARWHSTGLLYEAKGLDREALKAYKKALDVEAGHVPSLISAACVLRRLGGQCLGVVRSLLGDALRLDRMNPSAWYYLGLLYKSDERASAMEIAECFEASALLEESAPVEPFR 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12723507 12725993 - Bpe010248.1 Bpe13g00544 113324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00544 720 ProSiteProfiles TPR repeat profile. 609 642 IPR019734 GO:0005515
Bpe13g00544 720 SMART tpr_5 575 608 IPR019734 GO:0005515
Bpe13g00544 720 SMART tpr_5 519 552 IPR019734 GO:0005515
Bpe13g00544 720 SMART tpr_5 609 642 IPR019734 GO:0005515
Bpe13g00544 720 SMART tpr_5 483 516 IPR019734 GO:0005515
Bpe13g00544 720 Gene3D Tetratricopeptide repeat domain 417 555 IPR011990 GO:0005515
Bpe13g00544 720 SUPERFAMILY TPR-like 430 548 IPR011990 GO:0005515
Bpe13g00544 720 Gene3D Tetratricopeptide repeat domain 556 715 IPR011990 GO:0005515
Bpe13g00544 720 PANTHER OS10G0471400 PROTEIN 4 720 - -
Bpe13g00544 720 PANTHER PROTEIN NPG1 4 720 IPR043376 -
Bpe13g00544 720 SUPERFAMILY TPR-like 520 691 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00544 Bpe14g01270 CCT
Bpe13g00544 Bpe14g01270 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00941 Bpe-Chr8:11834045 Bpe13g00544 Bpe-Chr13:12723507 0 dispersed
Bpe11g00402 Bpe-Chr11:3073455 Bpe13g00544 Bpe-Chr13:12723507 0 dispersed
Bpe02g00455 Bpe-Chr2:2979603 Bpe13g00544 Bpe-Chr13:12723507 0 transposed
Bpe13g00544 Bpe-Chr13:12723507 Bpe14g01270 Bpe-Chr14:9612794 0 wgd
Bpe13g00544 Bpe-Chr13:12723507 Bpe03g00921 Bpe-Chr3:28917003 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00544 K21843 - jre:108991205 1037.71