Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe13g00567 | ATGGTCGCGGAGCCTTGGATTGTGAAAATGGGGAACCACGTGAGTTCCAATTTCAGGAGCGCGCTACTTCTCGAACCTGCCAAGAAAAAAAGCCCTAAATGTCCAGAAACCACCAAAAACAAGCAGACTATAGGTATTCTTTCTTTCGAGGTTGCGAATGTAATGTCCAAAATTGTTTACCTACACAAGTCACTCACCGTTTCTGAGATCTCGATGCTGAAAAACGAGATCTTCACCTCCGACGGCGTTAGAAACCTCGTTTCCTCCGACGAGGTTTATCTTCTCGAGCTCGCTTTGACCGAGAAGCTTGGGGAACTGAACCATGTGGCCAGTGTGGTCTCGAGATTAGGGAAAAGGTGTGTTGAACCGGCCTTGCATGGCTTTGAGCACGTGTATTCAGACATTGTTAGTGGTGTCATCGAAGTCAAGGAATTGGGATTTTTGGTGAAGGATATGGATGGAATGGTGAGGAAGATGGAGCGATACGTGGATGCTACATCCAATTTGTACAGTGAAATGGAGGTTTTGAATGAATTGGAGCAGGCGATTAAGAAGTTTCAGAATAATCAGCACGAGGAGAGTCGGAAAGTGTTCGAGCAAAAAGTTGTGTGGCAGAAAGAAGATATCAGACATCTCAAGGACATCTCAATTTGGAACCAAACGTACGATAAGGTTGTAGAGCTCTTGGCGAGGACTGTATGTACAGTGTATGCTAAGATTTGTCTTGTCTTCAGGGACGAAGATTTGAAGAAAAATGGTACTACCCTCTTTCAAGGAGGGGATTCTCAACCAGTAAATGACGACTATATTTATTTGGAGCAGTTTAAATTGAAGCGACTTCATAGTAATAGTAATCAGCCACATTCAGGGCCGATAGGGAGTGCACCTATAAATAAAAGGATGTCAAGTTTTAAGCCTCAGCTTGAATCAAGAAGAGATGAAGTAGCAGCCATTCGCGCAGAAGATTTTAATTTTCCATGTGGAACGAGCCCAGGCCGACTTTTCATGGACTGCCTTAATCTAAGCAACTCAATTTCAATGCTGGACGGAGAGGATGATTACGTAGATCATAGAGACCAAAGTAGTCACATTTCAAGTGGGTTTAGAAGGGAGCATTCGATCCATTCAGGTTCATTAAGCCGAACAAAAACAAGGGTTCCTTTAACTGGAGAACAAAAGCTACCAAAAAGTTCAATGAGTAACCGTGCAGGGTCTGGTCCAAGGAGTAGGTTATCTGTTTATGCTCCTCCTTCCACTGTTGGAGGCTCTGCTTTGGGCCTACATTATGCTAATGTGATCATTGTGATCGAGAAGTTGCTCCGTTATCCTCATCTCGTGGGTGAGGAGGCTAGAGATGATTTATATCAGATGTTACCAACGAGCTTAAGAACATCTCTTAAGTCCCATTTGAAGGCATATGCAAAGAATCTAGCTATATATGATGCCCCCCTCGCCCATGATTGGAAAGAGACTCTAGATGGGATTTTAAGATGGCTGGCTCCCCTGGCACATAACATGATAAGGTGGCAAAGTGATCGTAATTTTGAACAGCATCAAATCGTCACGCGAACTAATGTCCTACTTCTTCAAACGCTGTACTTTTCTGATAGAGAAAAGACAGAAGCAGCTATTTGTCAACTTCTAGTTGGGTTAAATTACATATGTCGTTATGAGCATCAACAGAATGCGTTATTGGACTGCGCTAGCAGTTTTGATTTTGAAGACTGCATGGAATGGAAAATGCAGTGCAAATCTTCTTATCTCAACAAAAATCTGGCGAATCCATGGTGGAGTGCTCAGGTGGGGCCGCTCGGAATGGACCCTGCAGCCGATTCACCGCAGCTGAAACAAGACCATCGCCACGTTTCGATGAGCTGCTGCGAGAGAAGTTATAGTCGAAGCAGAGTAGATGAAGAAGAAAGAGAGACAGAAGAAGGTGTGGTCGAGGTTGGAACGAAGAGGCCCAGAGGTCGACCACCTGGATCCAAAAACAAACCGAAACCACCGAACTTTATCGATCGGGAGAGCCCCAACTCGCTTCGGAGTATTGTTTTGGAGGTAGCTACAGGCGCCGAAATCGCCAACAGCATCTCCGAATACGCTCGGCGGTGCCGCCGAGGCATTTGCGTTCTAAGCGCAAAGGGTTCGGTGACAAACGTTACTCTTAGACAGCCCGCCGCACCTGGCTCCGCACTGGCTCTTTACGGCAGGTTCGAGATTCTTTCTCTGTCGGGGACTTTATTTCCCGACCCATCCATTCTTGGGTCCAGTGCGTTGACGATCTACTTAGCCGGAGCTCAGGGGCGGGTCGTCGGCGGAAGTGTTGTAGGGTCGCTAGTTGCAGCAGAACCAGTAATGATTATTGCTGCAACTTTCTCTAATGCAATTTACCAGAGGTTGCCCATTGAAGAAGATGATCCAGAGAGAGAAAATGGCGCAGGAAGCTCGCCTCCTGATGCCAGAATAGATCAACCCAGAATGCTTGACGGGTCCCCGATTCCAGTTTACAGCGATATTTACCGTCAAATCTAG | 2532 | 46.01 | MVAEPWIVKMGNHVSSNFRSALLLEPAKKKSPKCPETTKNKQTIGILSFEVANVMSKIVYLHKSLTVSEISMLKNEIFTSDGVRNLVSSDEVYLLELALTEKLGELNHVASVVSRLGKRCVEPALHGFEHVYSDIVSGVIEVKELGFLVKDMDGMVRKMERYVDATSNLYSEMEVLNELEQAIKKFQNNQHEESRKVFEQKVVWQKEDIRHLKDISIWNQTYDKVVELLARTVCTVYAKICLVFRDEDLKKNGTTLFQGGDSQPVNDDYIYLEQFKLKRLHSNSNQPHSGPIGSAPINKRMSSFKPQLESRRDEVAAIRAEDFNFPCGTSPGRLFMDCLNLSNSISMLDGEDDYVDHRDQSSHISSGFRREHSIHSGSLSRTKTRVPLTGEQKLPKSSMSNRAGSGPRSRLSVYAPPSTVGGSALGLHYANVIIVIEKLLRYPHLVGEEARDDLYQMLPTSLRTSLKSHLKAYAKNLAIYDAPLAHDWKETLDGILRWLAPLAHNMIRWQSDRNFEQHQIVTRTNVLLLQTLYFSDREKTEAAICQLLVGLNYICRYEHQQNALLDCASSFDFEDCMEWKMQCKSSYLNKNLANPWWSAQVGPLGMDPAADSPQLKQDHRHVSMSCCERSYSRSRVDEEERETEEGVVEVGTKRPRGRPPGSKNKPKPPNFIDRESPNSLRSIVLEVATGAEIANSISEYARRCRRGICVLSAKGSVTNVTLRQPAAPGSALALYGRFEILSLSGTLFPDPSILGSSALTIYLAGAQGRVVGGSVVGSLVAAEPVMIIAATFSNAIYQRLPIEEDDPERENGAGSSPPDARIDQPRMLDGSPIPVYSDIYRQI | 843 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 12842623 | 12847812 | + | Bpe010270.1 | Bpe13g00567 | 113347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe13g00567 | 843 | Coils | Coil | 169 | 196 | - | - | |
| Bpe13g00567 | 843 | Pfam | Protein of unknown function (DUF668) | 419 | 508 | IPR007700 | GO:0045927 | |
| Bpe13g00567 | 843 | PANTHER | DUF3475 DOMAIN PROTEIN | 1 | 585 | - | - | |
| Bpe13g00567 | 843 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 681 | 794 | IPR005175 | - | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 801 | 833 | - | - | |
| Bpe13g00567 | 843 | CDD | DUF296 | 681 | 752 | IPR005175 | - | |
| Bpe13g00567 | 843 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 677 | 805 | - | - | |
| Bpe13g00567 | 843 | PANTHER | BNAC09G50660D PROTEIN | 1 | 585 | - | - | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 633 | 652 | - | - | |
| Bpe13g00567 | 843 | Gene3D | - | 680 | 808 | - | - | |
| Bpe13g00567 | 843 | ProSiteProfiles | PPC domain profile profile. | 677 | 819 | IPR005175 | - | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 358 | 378 | - | - | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 358 | 410 | - | - | |
| Bpe13g00567 | 843 | Pfam | Domain of unknown function (DUF3475) | 46 | 102 | IPR021864 | GO:0045927 | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 633 | 676 | - | - | |
| Bpe13g00567 | 843 | MobiDBLite | consensus disorder prediction | 379 | 407 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe13g00567 | Bpe14g01239 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g01651 | Bpe-Chr4:22629890 | Bpe13g00567 | Bpe-Chr13:12842623 | 1.47E-43 | dispersed | |
| Bpe13g00567 | Bpe-Chr13:12842623 | Bpe04g01716 | Bpe-Chr4:23004462 | 5.61E-61 | dispersed | |
| Bpe15g01351 | Bpe-Chr15:21577418 | Bpe13g00567 | Bpe-Chr13:12842623 | 1.59E-37 | dispersed | |
| Bpe13g00567 | Bpe-Chr13:12842623 | Bpe14g01239 | Bpe-Chr14:9332880 | 0 | wgd | |
| Bpe13g00567 | Bpe-Chr13:12842623 | Bpe04g00800 | Bpe-Chr4:5254590 | 1.21E-75 | wgd | |
| Bpe13g00567 | Bpe-Chr13:12842623 | Bpe05g00865 | Bpe-Chr5:21849956 | 9.07E-75 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe13g00567 | - | - | zju:107408657 | 834.713 |