Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00588 ATGAGGGCCGGAGCGGCGACGTTCCGGTCTATACTGGACAGACCCCTCAACCAGCTAACCGAGGATGACATTTCCCAGCTCACCCGGGAAGACTGCCGCAGATATCTCAAAGAAAAAGGAATGCGTAGGCCTTCCTGGAACAAATCGCAGGCCATCCAGCAGGTCATATGTCTGAAGGCCTTGCTCGAACCCGGGGACGATTCAGGCTCCACTGCTCTCAGGAAGGTCGGCGTCTCCCCGCGCGTTACTTTAGATCAAGGCGATGATGACCAAATAGCATTGTCAGCTGCAGAATTAAATCCACAGAGTAGATTGGAGCCTCCAATATATTCTTCTGAGGATGCAATAGCTGACCCAGAAAACAAAACTGGCAGTTCGAGACTTCAATGCGTAAAAACGAAGTTGGTTGAGCAAATGTCAATTTTTTATGGGGGGAAGGTAAATGTGTACGACGGAGTGCCACCGGAGAAGGCTCATACAATAATTAATATTGCAGCCAGTCCAATCCATTTACCCCAAGACGATCGGATTGATGGAATGACAATAGTTTGGCCTTTTCCATGCCTTTTTCCAAGTACTTACGAAAGGGATTCCTCTTTTTCTCCTTGCGTCTCCATTAACGAGACCATCCAAACGGAGAGTCAGGTAAACCGAAAAGTCTCGCTTCAAAGATATCTAGACAAGCGAAAAGACAGAGAAAGATTGAAGACCAAGAAAAACGGGGGTTTGACTTCCAGCCTCAAGGTTTATTTTAACAATCATGCCAGAGTTCACATGTCAGATCGAAACTCAAACCGGACTAATTTAAGCTTCCCCTCTCAATCTGGGTTACCACAACGAACTTTCGATAGGACGGTCAGGTCAAACATCGGTTGTCTTCCAATTGACCTCAACATCAAAGATTGTTCCAATCTAAAGGCGAAAGAGGACGGAAAATAG 939 46.43 MRAGAATFRSILDRPLNQLTEDDISQLTREDCRRYLKEKGMRRPSWNKSQAIQQVICLKALLEPGDDSGSTALRKVGVSPRVTLDQGDDDQIALSAAELNPQSRLEPPIYSSEDAIADPENKTGSSRLQCVKTKLVEQMSIFYGGKVNVYDGVPPEKAHTIINIAASPIHLPQDDRIDGMTIVWPFPCLFPSTYERDSSFSPCVSINETIQTESQVNRKVSLQRYLDKRKDRERLKTKKNGGLTSSLKVYFNNHARVHMSDRNSNRTNLSFPSQSGLPQRTFDRTVRSNIGCLPIDLNIKDCSNLKAKEDGK 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13003423 13005890 - Bpe010291.1 Bpe13g00588 113368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00588 312 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 207 280 IPR040390 -
Bpe13g00588 312 ProSiteProfiles Tify domain profile. 132 167 IPR010399 -
Bpe13g00588 312 Pfam Jas motif 215 236 IPR018467 -
Bpe13g00588 312 SMART tify_2 132 167 IPR010399 -
Bpe13g00588 312 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 207 280 - -
Bpe13g00588 312 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 5 204 - -
Bpe13g00588 312 Pfam tify domain 138 166 IPR010399 -
Bpe13g00588 312 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 5 204 IPR040390 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00883 Bpe13g00588 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00588 Bpe-Chr13:13003423 Bpe05g00883 Bpe-Chr5:21967161 8.76E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22297 PF06200 tify 2.90E-13 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00588 - - csv:101204377 287.345